BLASTX nr result

ID: Bupleurum21_contig00007923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007923
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540935.1| PREDICTED: protein AF-9 homolog [Glycine max]      82   5e-14
ref|XP_002275472.1| PREDICTED: protein AF-9 homolog [Vitis vinif...    81   1e-13
ref|XP_002306148.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|NP_001190475.1| YEATS family protein [Arabidopsis thaliana] ...    69   4e-10
ref|XP_002865236.1| hypothetical protein ARALYDRAFT_494425 [Arab...    69   4e-10

>ref|XP_003540935.1| PREDICTED: protein AF-9 homolog [Glycine max]
          Length = 273

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/76 (55%), Positives = 47/76 (61%)
 Frame = -2

Query: 228 MPQSSSSKKHGSEQPENSGPTPKSQRXXXXXXXXXXXXXXXXXXXXXXEITVPIVYGNVA 49
           M  SSSS KHG +QP+ SGPTPKSQR                       I++PIVYGNVA
Sbjct: 1   MTNSSSSTKHGQDQPDLSGPTPKSQRTKMGKSEDNDKKNLGKKLKDVE-ISIPIVYGNVA 59

Query: 48  FWLGKKTSEHQSHKWT 1
           FWLGKK SE+QSHKWT
Sbjct: 60  FWLGKKASEYQSHKWT 75


>ref|XP_002275472.1| PREDICTED: protein AF-9 homolog [Vitis vinifera]
          Length = 273

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/73 (54%), Positives = 46/73 (63%)
 Frame = -2

Query: 219 SSSSKKHGSEQPENSGPTPKSQRXXXXXXXXXXXXXXXXXXXXXXEITVPIVYGNVAFWL 40
           S S+KKHG +QP+  GPTPKSQR                      EI+VPIVYGN+AFWL
Sbjct: 3   SLSTKKHGPDQPDIVGPTPKSQRSKMVKSTEDGEKKNLNKRLKDVEISVPIVYGNIAFWL 62

Query: 39  GKKTSEHQSHKWT 1
           GKK SE+QSHKWT
Sbjct: 63  GKKASEYQSHKWT 75


>ref|XP_002306148.1| predicted protein [Populus trichocarpa] gi|222849112|gb|EEE86659.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/74 (52%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 SSSSKKHGSEQP-ENSGPTPKSQRXXXXXXXXXXXXXXXXXXXXXXEITVPIVYGNVAFW 43
           SSSSKK+G + P E SGP PKSQR                       I+VPIVYGN+AFW
Sbjct: 5   SSSSKKNGQDHPVEISGPIPKSQRIKMSKTEENTEKKKLKDVE----ISVPIVYGNIAFW 60

Query: 42  LGKKTSEHQSHKWT 1
           LGKK +E+QSHKWT
Sbjct: 61  LGKKANEYQSHKWT 74


>ref|NP_001190475.1| YEATS family protein [Arabidopsis thaliana]
           gi|332007891|gb|AED95274.1| YEATS family protein
           [Arabidopsis thaliana]
          Length = 267

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/75 (50%), Positives = 42/75 (56%)
 Frame = -2

Query: 228 MPQSSSSKKHGSEQPENSGPTPKSQRXXXXXXXXXXXXXXXXXXXXXXEITVPIVYGNVA 49
           M  SSSSKK   +QPE S PT KS +                       I+VPIVYGNVA
Sbjct: 1   MTNSSSSKKQAQDQPETSEPTLKSLKTKMTKSDEKKKLKDIE-------ISVPIVYGNVA 53

Query: 48  FWLGKKTSEHQSHKW 4
           FWLGKK SE+QSHKW
Sbjct: 54  FWLGKKASEYQSHKW 68


>ref|XP_002865236.1| hypothetical protein ARALYDRAFT_494425 [Arabidopsis lyrata subsp.
           lyrata] gi|297311071|gb|EFH41495.1| hypothetical protein
           ARALYDRAFT_494425 [Arabidopsis lyrata subsp. lyrata]
          Length = 268

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/75 (50%), Positives = 42/75 (56%)
 Frame = -2

Query: 228 MPQSSSSKKHGSEQPENSGPTPKSQRXXXXXXXXXXXXXXXXXXXXXXEITVPIVYGNVA 49
           M  SSSSKK   +QPE S PT KS +                       I+VPIVYGNVA
Sbjct: 1   MTNSSSSKKQAQDQPETSEPTLKSLKAKMTKSDEKQKKLKDIE------ISVPIVYGNVA 54

Query: 48  FWLGKKTSEHQSHKW 4
           FWLGKK SE+QSHKW
Sbjct: 55  FWLGKKASEYQSHKW 69


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