BLASTX nr result

ID: Bupleurum21_contig00007912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007912
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   198   1e-48
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   196   7e-48
ref|XP_002515305.1| Transcription initiation factor TFIID subuni...   193   4e-47
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     190   5e-46
gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]           189   6e-46

>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  198 bits (504), Expect = 1e-48
 Identities = 96/115 (83%), Positives = 103/115 (89%)
 Frame = -3

Query: 798 VGLSQQSEPSFKRKRAVFQKELQHMMYGFGDDPNPLPETVALVEDIVIEYVTDLVHKAQD 619
           VG SQ SE SFKRKR VFQK+LQHMMYGFGDDPNPLPETVALVEDIV+EYVTDL HKAQD
Sbjct: 14  VGTSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQD 73

Query: 618 FASKRGKLLTEDFLYLVRKDAPKFNRCTELLSLNEELKQARKVFQVDEEKLATME 454
             SKRGKLL EDFLYL+RKD PK NRCTELLS+ EELKQARK F+VDEEKLA++E
Sbjct: 74  IGSKRGKLLVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFEVDEEKLASIE 128


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  196 bits (498), Expect = 7e-48
 Identities = 96/114 (84%), Positives = 104/114 (91%)
 Frame = -3

Query: 795 GLSQQSEPSFKRKRAVFQKELQHMMYGFGDDPNPLPETVALVEDIVIEYVTDLVHKAQDF 616
           G SQ S+ SFKRKR VFQK+LQHMMYGFGDD NPLPETVAL+EDIV+EYVTDLVHKAQ+ 
Sbjct: 15  GSSQPSDSSFKRKRGVFQKDLQHMMYGFGDDANPLPETVALLEDIVVEYVTDLVHKAQET 74

Query: 615 ASKRGKLLTEDFLYLVRKDAPKFNRCTELLSLNEELKQARKVFQVDEEKLATME 454
           ASKRGKLLTEDFL+L+RKD PK NRCTELLS+NEELKQARK F VDEEKLATME
Sbjct: 75  ASKRGKLLTEDFLFLMRKDLPKLNRCTELLSMNEELKQARKAFDVDEEKLATME 128


>ref|XP_002515305.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223545785|gb|EEF47289.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 128

 Score =  193 bits (491), Expect = 4e-47
 Identities = 94/115 (81%), Positives = 101/115 (87%)
 Frame = -3

Query: 798 VGLSQQSEPSFKRKRAVFQKELQHMMYGFGDDPNPLPETVALVEDIVIEYVTDLVHKAQD 619
           VG SQ SE SFKRKR VFQK+LQHMMYGFGDDPNPLPE+VALVEDIV+EYVTDL HKAQD
Sbjct: 14  VGSSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPESVALVEDIVVEYVTDLAHKAQD 73

Query: 618 FASKRGKLLTEDFLYLVRKDAPKFNRCTELLSLNEELKQARKVFQVDEEKLATME 454
             SKRGKL  EDFLYL+RKD PK NRCTELLS+ EELKQARK F+VDEEKLA+ E
Sbjct: 74  IGSKRGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFEVDEEKLASAE 128


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  190 bits (482), Expect = 5e-46
 Identities = 91/111 (81%), Positives = 101/111 (90%)
 Frame = -3

Query: 795 GLSQQSEPSFKRKRAVFQKELQHMMYGFGDDPNPLPETVALVEDIVIEYVTDLVHKAQDF 616
           G SQ SE S KRKR +FQK+LQHMMYGFGDD NPLPETVALVEDIV++YVTD+VHKAQD 
Sbjct: 15  GASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVEDIVVDYVTDMVHKAQDV 74

Query: 615 ASKRGKLLTEDFLYLVRKDAPKFNRCTELLSLNEELKQARKVFQVDEEKLA 463
           A+KRGKLLTEDFL+L+RKD PK NRCTELLS+NEELKQARK F+VDEEKLA
Sbjct: 75  ATKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVDEEKLA 125


>gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]
          Length = 128

 Score =  189 bits (481), Expect = 6e-46
 Identities = 91/110 (82%), Positives = 100/110 (90%)
 Frame = -3

Query: 798 VGLSQQSEPSFKRKRAVFQKELQHMMYGFGDDPNPLPETVALVEDIVIEYVTDLVHKAQD 619
           VG SQ SE S KRKR +FQK+LQHMMYGFGDD NPLPETVALVEDIV++YVTD+VHKAQD
Sbjct: 14  VGASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVEDIVVDYVTDMVHKAQD 73

Query: 618 FASKRGKLLTEDFLYLVRKDAPKFNRCTELLSLNEELKQARKVFQVDEEK 469
            ASKRGKLLTEDFL+L+RKD PK NRCTELLS+NEELKQARK F+VDEEK
Sbjct: 74  VASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVDEEK 123


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