BLASTX nr result

ID: Bupleurum21_contig00007911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007911
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282410.1| PREDICTED: coatomer subunit beta-1 [Vitis vi...   304   9e-81
ref|XP_002515343.1| Coatomer subunit beta, putative [Ricinus com...   296   2e-78
ref|XP_002330796.1| predicted protein [Populus trichocarpa] gi|2...   296   2e-78
ref|XP_002330795.1| predicted protein [Populus trichocarpa] gi|2...   296   2e-78
ref|XP_002324951.1| predicted protein [Populus trichocarpa] gi|2...   291   6e-77

>ref|XP_002282410.1| PREDICTED: coatomer subunit beta-1 [Vitis vinifera]
            gi|147845891|emb|CAN82167.1| hypothetical protein
            VITISV_023269 [Vitis vinifera]
          Length = 948

 Score =  304 bits (778), Expect = 9e-81
 Identities = 154/198 (77%), Positives = 172/198 (86%)
 Frame = +3

Query: 3    TTIKQCLGDLPFYTDSEEGEPADSSKKSQQVNSITVSSKRPAILADGTYATQSAASETAF 182
            TTIKQCLGDLPF++ SEEGE +DSSKK QQVN+ TVSS+RPA+LADGTYATQSAASETAF
Sbjct: 472  TTIKQCLGDLPFFSVSEEGEASDSSKKVQQVNATTVSSRRPAVLADGTYATQSAASETAF 531

Query: 183  SPPTVVQXXXXXXXXXXXXXXXDFFLGAVVSCTLTKLILRYEEVQASKVEVNKASTQALL 362
            SPPT+VQ               DFFLGAVV+CTLTKL+LR EEVQ SK EVNK S+QALL
Sbjct: 532  SPPTLVQGSLSSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSKAEVNKVSSQALL 591

Query: 363  IIVSIIQLGQSSFLSHPIDNDSHDRIVLCIRLLCNTGDEIRKIWLQSCRESFVKMLSDKQ 542
            I+VS++QLGQSS L HPIDNDS+DRIVLCIRLLCNTGD+IRKIWLQSCR+S+VKML+DKQ
Sbjct: 592  IMVSMLQLGQSSVLPHPIDNDSYDRIVLCIRLLCNTGDDIRKIWLQSCRQSYVKMLADKQ 651

Query: 543  LRETAEIKAKAQISYAQP 596
            LRET EIKAKAQISYAQP
Sbjct: 652  LRETEEIKAKAQISYAQP 669


>ref|XP_002515343.1| Coatomer subunit beta, putative [Ricinus communis]
           gi|223545287|gb|EEF46792.1| Coatomer subunit beta,
           putative [Ricinus communis]
          Length = 819

 Score =  296 bits (758), Expect = 2e-78
 Identities = 150/197 (76%), Positives = 169/197 (85%)
 Frame = +3

Query: 6   TIKQCLGDLPFYTDSEEGEPADSSKKSQQVNSITVSSKRPAILADGTYATQSAASETAFS 185
           TIKQCLG+LPFY+ SEEGE  D+SKK QQ NSITVSS+RPAILADGTYATQSAASETAFS
Sbjct: 344 TIKQCLGELPFYSVSEEGEATDASKKPQQANSITVSSRRPAILADGTYATQSAASETAFS 403

Query: 186 PPTVVQXXXXXXXXXXXXXXXDFFLGAVVSCTLTKLILRYEEVQASKVEVNKASTQALLI 365
           PPT+VQ               DFFLGAVV+CTLTKL+LR EEVQ +KVEVNKAS+ ALLI
Sbjct: 404 PPTLVQGTLASGNLRSLILTGDFFLGAVVACTLTKLVLRLEEVQPAKVEVNKASSHALLI 463

Query: 366 IVSIIQLGQSSFLSHPIDNDSHDRIVLCIRLLCNTGDEIRKIWLQSCRESFVKMLSDKQL 545
           +VS+IQLGQS  L HPIDNDS+DRI+LCIRLLCNTGD+IRKIWLQSC +SFVKMLS+KQL
Sbjct: 464 MVSMIQLGQSPVLPHPIDNDSYDRILLCIRLLCNTGDDIRKIWLQSCHQSFVKMLSEKQL 523

Query: 546 RETAEIKAKAQISYAQP 596
           RET E+KAKAQ+S+AQP
Sbjct: 524 RETEELKAKAQVSHAQP 540


>ref|XP_002330796.1| predicted protein [Populus trichocarpa] gi|222872598|gb|EEF09729.1|
            predicted protein [Populus trichocarpa]
          Length = 690

 Score =  296 bits (758), Expect = 2e-78
 Identities = 151/198 (76%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
 Frame = +3

Query: 6    TIKQCLGDLPFYTDSEEGE-PADSSKKSQQVNSITVSSKRPAILADGTYATQSAASETAF 182
            TIKQCLG+LPFY+ SEEGE P D+SK SQQ +S+TVSS+RPAIL+DGTYATQSAASETAF
Sbjct: 473  TIKQCLGELPFYSVSEEGEAPTDASKNSQQPSSVTVSSRRPAILSDGTYATQSAASETAF 532

Query: 183  SPPTVVQXXXXXXXXXXXXXXXDFFLGAVVSCTLTKLILRYEEVQASKVEVNKASTQALL 362
            SPPT+VQ               DFFLGAVV+CTLTKL+LR EEVQ SKVEVNKAS QALL
Sbjct: 533  SPPTIVQGSLAAGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSKVEVNKASAQALL 592

Query: 363  IIVSIIQLGQSSFLSHPIDNDSHDRIVLCIRLLCNTGDEIRKIWLQSCRESFVKMLSDKQ 542
            I+VS+IQLGQS  LSHPID DS+DRI+LCIRLLC+TGDE+RKIWLQSCR+SFVKMLS+KQ
Sbjct: 593  IMVSMIQLGQSPVLSHPIDGDSYDRILLCIRLLCSTGDEVRKIWLQSCRQSFVKMLSEKQ 652

Query: 543  LRETAEIKAKAQISYAQP 596
            LRET E+KAKAQ+SYAQP
Sbjct: 653  LRETEELKAKAQVSYAQP 670


>ref|XP_002330795.1| predicted protein [Populus trichocarpa] gi|222872597|gb|EEF09728.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  296 bits (758), Expect = 2e-78
 Identities = 151/198 (76%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
 Frame = +3

Query: 6    TIKQCLGDLPFYTDSEEGE-PADSSKKSQQVNSITVSSKRPAILADGTYATQSAASETAF 182
            TIKQCLG+LPFY+ SEEGE P D+SK SQQ +S+TVSS+RPAIL+DGTYATQSAASETAF
Sbjct: 473  TIKQCLGELPFYSVSEEGEAPTDASKNSQQPSSVTVSSRRPAILSDGTYATQSAASETAF 532

Query: 183  SPPTVVQXXXXXXXXXXXXXXXDFFLGAVVSCTLTKLILRYEEVQASKVEVNKASTQALL 362
            SPPT+VQ               DFFLGAVV+CTLTKL+LR EEVQ SKVEVNKAS QALL
Sbjct: 533  SPPTIVQGSLAAGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSKVEVNKASAQALL 592

Query: 363  IIVSIIQLGQSSFLSHPIDNDSHDRIVLCIRLLCNTGDEIRKIWLQSCRESFVKMLSDKQ 542
            I+VS+IQLGQS  LSHPID DS+DRI+LCIRLLC+TGDE+RKIWLQSCR+SFVKMLS+KQ
Sbjct: 593  IMVSMIQLGQSPVLSHPIDGDSYDRILLCIRLLCSTGDEVRKIWLQSCRQSFVKMLSEKQ 652

Query: 543  LRETAEIKAKAQISYAQP 596
            LRET E+KAKAQ+SYAQP
Sbjct: 653  LRETEELKAKAQVSYAQP 670


>ref|XP_002324951.1| predicted protein [Populus trichocarpa] gi|222866385|gb|EEF03516.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  291 bits (745), Expect = 6e-77
 Identities = 149/198 (75%), Positives = 170/198 (85%), Gaps = 1/198 (0%)
 Frame = +3

Query: 6    TIKQCLGDLPFYTDSEEGE-PADSSKKSQQVNSITVSSKRPAILADGTYATQSAASETAF 182
            TIKQCLG+LPFY+ SEEGE P D+SK SQQ +S+TVSS+RPAIL+DGTYATQSAASETAF
Sbjct: 473  TIKQCLGELPFYSVSEEGEAPTDASKNSQQPSSVTVSSRRPAILSDGTYATQSAASETAF 532

Query: 183  SPPTVVQXXXXXXXXXXXXXXXDFFLGAVVSCTLTKLILRYEEVQASKVEVNKASTQALL 362
            SPP++VQ               DFFLGAVV+CTLTKL+LR EEVQ S+ EVNK STQALL
Sbjct: 533  SPPSIVQGSLAAGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRGEVNKVSTQALL 592

Query: 363  IIVSIIQLGQSSFLSHPIDNDSHDRIVLCIRLLCNTGDEIRKIWLQSCRESFVKMLSDKQ 542
            I+VS+IQLGQS  LSHPID DS+DRIVLCIRLLC+TGDE+RKIWLQSCR+SFVKMLS+KQ
Sbjct: 593  IMVSMIQLGQSPVLSHPIDCDSYDRIVLCIRLLCSTGDEVRKIWLQSCRQSFVKMLSEKQ 652

Query: 543  LRETAEIKAKAQISYAQP 596
            LRET E+KAKAQ+SYAQP
Sbjct: 653  LRETEELKAKAQVSYAQP 670


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