BLASTX nr result

ID: Bupleurum21_contig00007900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007900
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   258   5e-67
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   257   1e-66
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   256   2e-66
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   255   3e-66
ref|XP_004172997.1| PREDICTED: ABC transporter C family member 1...   254   9e-66

>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  258 bits (659), Expect = 5e-67
 Identities = 122/192 (63%), Positives = 155/192 (80%)
 Frame = -1

Query: 578 HQFNFQCARLGMLIRCSLITSVYRKGLRLSCSSRQSHGVGQIVNYMAVDAQQLSDMVPQL 399
           H FNF   +LGMLIR +LITS+YRKGLRLSCS+RQ HGVGQIVNYMAVDAQQLSDM+ QL
Sbjct: 385 HHFNFNSQKLGMLIRSTLITSLYRKGLRLSCSARQDHGVGQIVNYMAVDAQQLSDMMLQL 444

Query: 398 HPIWMTPVQIFIALALLYYYMGLSTVAALISVIAAMCVTLLITRRNNKFQYQVMRNRDSR 219
           H IW+ P+Q+ +AL LLY  +G + + A+I + A +   L+ TRRNN+FQ+ VM+NRD R
Sbjct: 445 HAIWLMPLQVTVALVLLYNELGGAMITAVIGIFAVLLFVLMGTRRNNRFQHNVMKNRDLR 504

Query: 218 MKATNELLGNMRVIKFQAWEDHFNKKIQSFRNVEYGWLSKFTYSMCANMVILGSTPTIIA 39
           MKATNE+L  MRVIKFQAWE+HFNK+IQSFR  E+GWL+KF YS+  N++++ STP +I+
Sbjct: 505 MKATNEMLNYMRVIKFQAWEEHFNKRIQSFRESEFGWLTKFMYSISGNIIVMWSTPLMIS 564

Query: 38  ALTFAIAVLLKV 3
           A TFA A++L V
Sbjct: 565 AFTFATAIMLGV 576


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1508

 Score =  257 bits (656), Expect = 1e-66
 Identities = 119/192 (61%), Positives = 154/192 (80%)
 Frame = -1

Query: 578 HQFNFQCARLGMLIRCSLITSVYRKGLRLSCSSRQSHGVGQIVNYMAVDAQQLSDMVPQL 399
           HQFNF   +LGMLIRCSLITS+Y+KGLRLSCS+RQ+HGVGQIVNYMAVDAQQLSDM+ QL
Sbjct: 385 HQFNFNSQKLGMLIRCSLITSLYKKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL 444

Query: 398 HPIWMTPVQIFIALALLYYYMGLSTVAALISVIAAMCVTLLITRRNNKFQYQVMRNRDSR 219
           H IW+ P+Q+ + L LLY  +G ST+ A + +++ +   +  T+RNN+FQ  VM NRDSR
Sbjct: 445 HSIWLMPLQLGVGLVLLYNVLGASTITAFLGILSVILFAIFGTKRNNRFQRNVMVNRDSR 504

Query: 218 MKATNELLGNMRVIKFQAWEDHFNKKIQSFRNVEYGWLSKFTYSMCANMVILGSTPTIIA 39
           MKATNE+L  MRVIKFQAWE+HFNK+IQ+FR  E+GW+SKF YS+  N++++ S P +++
Sbjct: 505 MKATNEMLNYMRVIKFQAWEEHFNKRIQNFRESEFGWISKFLYSISGNIIVMWSAPLLVS 564

Query: 38  ALTFAIAVLLKV 3
            LTF  A+LL V
Sbjct: 565 TLTFGTALLLGV 576


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  256 bits (654), Expect = 2e-66
 Identities = 122/192 (63%), Positives = 151/192 (78%)
 Frame = -1

Query: 578 HQFNFQCARLGMLIRCSLITSVYRKGLRLSCSSRQSHGVGQIVNYMAVDAQQLSDMVPQL 399
           HQFNF   +LGMLIRC+LITS+Y+KGL LSCS+RQ+HGVGQIVNYMAVDAQQLSDM+ QL
Sbjct: 384 HQFNFNSRKLGMLIRCTLITSLYKKGLMLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL 443

Query: 398 HPIWMTPVQIFIALALLYYYMGLSTVAALISVIAAMCVTLLITRRNNKFQYQVMRNRDSR 219
           H IW+ P+Q+ + LALLY  +G S V ALI  +  +   +   +RNNKFQ  VM NRDSR
Sbjct: 444 HSIWLMPLQVGVGLALLYNALGTSAVTALIGTLGVIVFAVFSNKRNNKFQRNVMINRDSR 503

Query: 218 MKATNELLGNMRVIKFQAWEDHFNKKIQSFRNVEYGWLSKFTYSMCANMVILGSTPTIIA 39
           MKATNE+L  MRVIKFQAWEDHFNK+IQ FR+ E+GW+SKF YS+  N +++ STP +++
Sbjct: 504 MKATNEMLNYMRVIKFQAWEDHFNKRIQDFRDSEFGWISKFLYSISINTIVMWSTPLLVS 563

Query: 38  ALTFAIAVLLKV 3
            LTF  A+LL V
Sbjct: 564 TLTFGTALLLGV 575


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  255 bits (652), Expect = 3e-66
 Identities = 123/192 (64%), Positives = 152/192 (79%)
 Frame = -1

Query: 578 HQFNFQCARLGMLIRCSLITSVYRKGLRLSCSSRQSHGVGQIVNYMAVDAQQLSDMVPQL 399
           HQFNF   +LGMLIR +LITS+YRKGLRLSCS+RQSHGVGQIVNYMAVDAQQLSDM+ QL
Sbjct: 383 HQFNFNSQKLGMLIRSTLITSLYRKGLRLSCSARQSHGVGQIVNYMAVDAQQLSDMMLQL 442

Query: 398 HPIWMTPVQIFIALALLYYYMGLSTVAALISVIAAMCVTLLITRRNNKFQYQVMRNRDSR 219
           H IW+ P+Q+ +AL LLY  +G+S +AALI +   M   L  TRRNN+FQ  +M NRDSR
Sbjct: 443 HAIWLMPLQVTVALVLLYNALGVSVIAALIGIACVMVFALYGTRRNNRFQKNLMMNRDSR 502

Query: 218 MKATNELLGNMRVIKFQAWEDHFNKKIQSFRNVEYGWLSKFTYSMCANMVILGSTPTIIA 39
           MKATNE+L  MRVIKFQAWE+HFNK+IQ+FR  E+ WLSKF YS+  N++++  TP +I+
Sbjct: 503 MKATNEMLNYMRVIKFQAWEEHFNKRIQNFRESEFEWLSKFMYSVSGNIIVMWCTPLLIS 562

Query: 38  ALTFAIAVLLKV 3
            +TF  A+L  V
Sbjct: 563 TVTFGTALLFGV 574


>ref|XP_004172997.1| PREDICTED: ABC transporter C family member 14-like, partial
           [Cucumis sativus]
          Length = 1188

 Score =  254 bits (648), Expect = 9e-66
 Identities = 117/192 (60%), Positives = 150/192 (78%)
 Frame = -1

Query: 578 HQFNFQCARLGMLIRCSLITSVYRKGLRLSCSSRQSHGVGQIVNYMAVDAQQLSDMVPQL 399
           H FNF   +LGMLIRC+LITS+Y+KGL+LS S+RQ+HG+GQIVNYMAVDAQQLSDM+ QL
Sbjct: 327 HHFNFSSQKLGMLIRCTLITSIYKKGLKLSSSARQAHGIGQIVNYMAVDAQQLSDMMRQL 386

Query: 398 HPIWMTPVQIFIALALLYYYMGLSTVAALISVIAAMCVTLLITRRNNKFQYQVMRNRDSR 219
           H IW+TP Q+ IA ALLY Y+G + VAA + ++A     L  T+ NN+F  QVM  RDSR
Sbjct: 387 HAIWLTPFQVAIAFALLYVYIGAAVVAAAVGLLAVFLFILFTTKNNNRFMRQVMMGRDSR 446

Query: 218 MKATNELLGNMRVIKFQAWEDHFNKKIQSFRNVEYGWLSKFTYSMCANMVILGSTPTIIA 39
           MKATNE+L NMRVIKFQAWE+HF +++++FR  E+ WLSKF YS+   MV+LGS P +I+
Sbjct: 447 MKATNEMLNNMRVIKFQAWEEHFQRRVETFRETEFKWLSKFMYSVSTTMVVLGSAPALIS 506

Query: 38  ALTFAIAVLLKV 3
            +TF  A+LL +
Sbjct: 507 TVTFGCAILLGI 518


Top