BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007894
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   234   8e-60
ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   224   1e-56
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55
ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat...   216   2e-54
ref|XP_002887547.1| pentatricopeptide repeat-containing protein ...   201   1e-49

>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  234 bits (597), Expect = 8e-60
 Identities = 108/150 (72%), Positives = 130/150 (86%)
 Frame = +3

Query: 3    CHTVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYK 182
            CHTV+T+NIMINAF+EKL +DMA+KL+ EM   G  PD YTYR +IDGFCKVGN+++ Y 
Sbjct: 571  CHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYD 630

Query: 183  FLLKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVNSIFEADKRV 362
            FLLKEI+ G +PSLTTFGRVINCLC+++RVHEAVG+V  MV  G+VP+ V +IF+ADK+ 
Sbjct: 631  FLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDADKKA 690

Query: 363  VAAPKIVVEDLLKKSHITYYAYELLYDGIR 452
            VAAPKI+VEDLLKKSHITYYAYELLYDGIR
Sbjct: 691  VAAPKIIVEDLLKKSHITYYAYELLYDGIR 720



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 31/108 (28%), Positives = 62/108 (57%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           + TFN +I+ + ++LK+D A  +   M ++G  PD  TY  +++G CK    +   +   
Sbjct: 433 IFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFK 492

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVN 335
             +++G +P++ T+  +I  LC   +V EA+ L+  + + G++PD V+
Sbjct: 493 MIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVS 540



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
 Frame = +3

Query: 9   TVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFL 188
           ++  +N +I   +++  +  A +L  +MS  G  PD +TY  +I+G CK+G +  A   L
Sbjct: 362 SIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLL 421

Query: 189 LKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEADKRV 362
              I +G +P + TF  +I+  C + ++  A+G++ +M S G+ PD  T NSI     + 
Sbjct: 422 NAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK- 480

Query: 363 VAAPKIVVE 389
            A P+ V+E
Sbjct: 481 AAKPEDVME 489



 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N++IN   +   +  A  L     A GY PD +T+  LIDG+CK   +D A   L   
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM 459

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEA 350
              G+ P + T+  ++N LC   +  + +   + ++  G +P+  T N + E+
Sbjct: 460 WSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIES 512



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/103 (30%), Positives = 56/103 (54%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N +I  +++  K+  A ++ ++    G+ PD +TY  LI G C+ G+ID A     + 
Sbjct: 295 TYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEA 354

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD 326
           + +GL PS+  +  +I  L  +  V +A+ L+  M   G+ PD
Sbjct: 355 LGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPD 397


>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
            unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  224 bits (570), Expect = 1e-56
 Identities = 102/149 (68%), Positives = 128/149 (85%)
 Frame = +3

Query: 6    HTVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKF 185
            HT++T+NIMINAF  KL ++MAEKL+ +M  NG+ PD YTYR +IDGFCK GNI++ Y F
Sbjct: 599  HTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSF 658

Query: 186  LLKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVNSIFEADKRVV 365
            LL +I++GLIPSLTTFGRV+NCLC+K RVHEAVG++  MV  GIVP+ VN+IFEADK+ V
Sbjct: 659  LLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEADKKEV 718

Query: 366  AAPKIVVEDLLKKSHITYYAYELLYDGIR 452
            AAPKIVVE+L+KK HITY+AYE+L+DGIR
Sbjct: 719  AAPKIVVENLMKKGHITYFAYEILHDGIR 747



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/108 (32%), Positives = 59/108 (54%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           V TFN +I+ + +KLKLD A ++   M  +G  PD  TY  +++G CK G  +       
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVN 335
             +++G +P++ T+  +    C   +V EA+ L+  M + G+ PD VN
Sbjct: 520 LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVN 567



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
 Frame = +3

Query: 24  NIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKEID 203
           N ++   +++  +  A KL  EMS NG  PD +TY  +I+G CK+G +  A   ++  I 
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 204 EGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV------NSIFEADK--R 359
           +G +P + TF  +I+  C K ++  A+ +V  M + G+ PD +      N + +A K   
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513

Query: 360 VVAAPKIVVEDLLKKSHITY 419
           V+   K+++E     + ITY
Sbjct: 514 VMGTFKLMMEKGCVPNIITY 533



 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 33/107 (30%), Positives = 56/107 (52%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           V T+N +I    +  K+  AE   ++M   GY PD +TY  +IDG+CK+G +  A + L 
Sbjct: 285 VITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILR 344

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
               +G +P  +T+  +IN LC    +  A+ +    +  G+ P+ V
Sbjct: 345 DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLV 391



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/105 (28%), Positives = 58/105 (55%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N++IN   +   +  A+ L  +  A G+ PD +T+  LIDG+CK   +D A + + + 
Sbjct: 427 TYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRM 486

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
            + G+ P + T+  ++N LC   +  + +G  + M+  G VP+ +
Sbjct: 487 WNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNII 531



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           + T+NI+  +F +  K++ A  L +EM   G  PD   +  L+ GFC  G++D AY+ L 
Sbjct: 530 IITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQ-LF 588

Query: 192 KEIDE--GLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDT 329
           K +DE      ++ T+  +IN    K  ++ A  L   M   G  PD+
Sbjct: 589 KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDS 636



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N +I+ + +   +  A+++ ++ +  G+ PD  TY  LI+G C+ G+ID A     + 
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEADKRV--V 365
           +++GL P+L     ++  L  +  + +A+ L+  M   G  PD  T N +     ++  V
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441

Query: 366 AAPKIVVEDLLKKSHI-TYYAYELLYDG 446
           +    +V D + K H+   + +  L DG
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDG 469


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
            predicted protein [Populus trichocarpa]
          Length = 761

 Score =  219 bits (559), Expect = 2e-55
 Identities = 107/149 (71%), Positives = 123/149 (82%)
 Frame = +3

Query: 6    HTVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKF 185
            HT +T+NIMINAF EKL L M EKL+ EM A G  PD YTYR +IDGFC  GN D+ YKF
Sbjct: 600  HTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKF 659

Query: 186  LLKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVNSIFEADKRVV 365
            LL+ I++G IPSLTTFGRVINCLC+++RVHEAV ++  MV  GIVP+ VNSI EADK+VV
Sbjct: 660  LLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEADKKVV 719

Query: 366  AAPKIVVEDLLKKSHITYYAYELLYDGIR 452
            AAPKIVVEDLLK+S ITYYAYELLYDGIR
Sbjct: 720  AAPKIVVEDLLKRSCITYYAYELLYDGIR 748



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 34/107 (31%), Positives = 54/107 (50%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           V T+N +I    +   +  AEK   ++   G  PD +TY  LIDG+CK+G +  A K L 
Sbjct: 286 VVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
             I +G +P   T+  +IN LC  + +  A+ L    +  G+ P  +
Sbjct: 346 GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVI 392



 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
 Frame = +3

Query: 9   TVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFL 188
           TV  +N++I    ++  +  A ++  EMS NG   D +TY  +I+G CK+G +  A   +
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449

Query: 189 LKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEADKRV 362
              I +G +P + TF  +I+  C + ++   + ++  M S G+ PD  T NS+     + 
Sbjct: 450 NDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKA 509

Query: 363 V 365
           V
Sbjct: 510 V 510



 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 31/108 (28%), Positives = 62/108 (57%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           V TFN +I+ + ++LK++   ++  +M ++G  PD  TY  +++G  K    +   +   
Sbjct: 461 VFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFE 520

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVN 335
             +++G +P+  T+  +   LC   +V+EA+ LV  +++ GI PDTV+
Sbjct: 521 TMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568



 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 32/105 (30%), Positives = 53/105 (50%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N++IN   +   +  A  L  +  A GY PD +T+  LIDG+CK   ++   + L K 
Sbjct: 428 TYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKM 487

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
              G+ P + T+  V+N L    +  + +    TMV  G VP+ +
Sbjct: 488 WSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKI 532



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 35/108 (32%), Positives = 50/108 (46%)
 Frame = +3

Query: 3   CHTVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYK 182
           C  + TFNI I     K  L  A  +   +   G  PD  TY  LI G CK  N+  A K
Sbjct: 248 CSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEK 307

Query: 183 FLLKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD 326
           +L K ++ GL P   T+  +I+  C    +  A  +++  +  G VPD
Sbjct: 308 YLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPD 355



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           VSTFN +++   +K ++  +E+L  ++   G   + +T+   I G C+ G +  A   L 
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLD 275

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFE 347
             I EGL P + T+  +I  LC  + V EA   +  +V+ G+ PD  T N++ +
Sbjct: 276 SVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N +I+ + +   L  AEK+ Q     G+ PD +TY  LI+G C+   ID A       
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEADKRV--V 365
           + +GL P++  +  +I  LC +  + +A+ ++  M   G   D  T N +     ++  V
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCV 442

Query: 366 AAPKIVVEDLLKKSHI-TYYAYELLYDG 446
           +    ++ D + K ++   + +  L DG
Sbjct: 443 SDANNLMNDAIAKGYVPDVFTFNTLIDG 470


>ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580-like [Glycine max]
          Length = 747

 Score =  216 bits (550), Expect = 2e-54
 Identities = 98/150 (65%), Positives = 126/150 (84%)
 Frame = +3

Query: 3    CHTVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYK 182
            CHT +T+NI+++AF+E+L ++MA KL+  M  +G  PD YTYR +IDGFCK+GNI   YK
Sbjct: 573  CHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYK 632

Query: 183  FLLKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVNSIFEADKRV 362
            FLL+ +++  IPSLTTFGRV+NCLC+K++VHEAVG++  M+  GIVP+TVN+IFEADK+V
Sbjct: 633  FLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIFEADKKV 692

Query: 363  VAAPKIVVEDLLKKSHITYYAYELLYDGIR 452
            VAAPKI+VEDLLKK HI YY YELLYDGIR
Sbjct: 693  VAAPKILVEDLLKKGHIAYYTYELLYDGIR 722



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/108 (32%), Positives = 62/108 (57%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           + T+N +I+ + ++LKLD A ++   M + G  PD  TY  L++G CK G  +   +   
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVN 335
              ++G  P++ T+  +++ LC   +V+EAV L+  M S G+ PD V+
Sbjct: 495 AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N++IN   +   +  A  L  +  A G PPD +TY  LIDG+CK   +D+A + + + 
Sbjct: 402 TYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
             +G+ P + T+  ++N LC   +  E + + + M   G  P+ +
Sbjct: 462 WSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506



 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 30/108 (27%), Positives = 58/108 (53%)
 Frame = +3

Query: 9   TVSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFL 188
           ++  +N +I   +++  +  A +L  EM+ NG  P+ +TY  +I+G CK+G +  A   +
Sbjct: 364 SIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLV 423

Query: 189 LKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
              I +G  P + T+  +I+  C + ++  A  +V  M S G+ PD +
Sbjct: 424 DDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVI 471



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           T+N +I+ + +K  +  A ++ ++    G+ PD +TY  LI+GFCK G+ D A       
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 198 IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEADKR---V 362
           + +GL PS+  +  +I  L  +  +  A+ L+  M   G +P+  T N +     +   V
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 363 VAAPKIVVEDLLKKSHITYYAYELLYDG 446
             A  +V + + K      + Y  L DG
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDG 444



 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYK-FL 188
           + T+NI++++  +  K++ A  L  EM + G  PD  ++  L  GFCK+G+ID AY+ F 
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFR 564

Query: 189 LKEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVNSIFEADKRVVA 368
             E    +  +  T+  +++    +  ++ A+ L   M + G  PD              
Sbjct: 565 RMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTY---------- 614

Query: 369 APKIVVEDLLKKSHITYYAYELLYDGI 449
             ++V++   K  +IT   Y+ L + +
Sbjct: 615 --RVVIDGFCKMGNIT-QGYKFLLENM 638


>ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297333388|gb|EFH63806.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 763

 Score =  201 bits (510), Expect = 1e-49
 Identities = 93/145 (64%), Positives = 119/145 (82%)
 Frame = +3

Query: 18   TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
            T+NI+I+AFTEKL + MAEKL+QEM      PD YTYR ++DGFCK GN+D  YKFLL+ 
Sbjct: 604  TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEM 663

Query: 198  IDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTVNSIFEADKRVVAAPK 377
            ++ G IPSLTT GRVINCLC+++RV+EA G++  MV  G+VP+ VN+IF+ DK+ VAAPK
Sbjct: 664  MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTIFDHDKKEVAAPK 723

Query: 378  IVVEDLLKKSHITYYAYELLYDGIR 452
            +V+EDLLKKS ITYYAYELL+DG+R
Sbjct: 724  LVLEDLLKKSCITYYAYELLFDGLR 748



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/107 (31%), Positives = 62/107 (57%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           + TFNI+I+ ++ +LK++ A ++   M  NG  PD YTY  L++G CK    +   +   
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYK 520

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
             +++G  P+L TF  ++  LC  +++ +A+GL+  M +  + PD V
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAV 567



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           +STFN +++   +K  +   EKL  ++   G  P+ +TY   I G C+ G +DAA + + 
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEA---DK 356
           + ID+G  P + T+  +I  LC  ++  EA   +  +V+ G+ PD  T N++        
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335

Query: 357 RVVAAPKIVVEDLLKKSHITYYAYELLYDGI 449
            V  A +I+V  +        + Y  L DG+
Sbjct: 336 MVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366



 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 35/138 (25%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAA------- 176
           T+N +I  + +   + +AE++      NG+ PD +TYR LIDG C  G  + A       
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 177 -----------YKFLLKEI-----------------DEGLIPSLTTFGRVINCLCIKNRV 272
                      Y  L+K +                 ++GLIP + TF  ++N LC    V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 273 HEAVGLVRTMVSMGIVPD 326
            +A GLV+ M+S G  PD
Sbjct: 443 SDADGLVKVMISKGYFPD 460



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 31/107 (28%), Positives = 52/107 (48%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           V T+N +I    +  K   AE    ++   G  PD +TY  LI G+CK G +  A + L+
Sbjct: 286 VVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILV 345

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPDTV 332
             +  G +P   T+  +I+ LC +   + A+ L    +  GI P+ +
Sbjct: 346 NAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +3

Query: 12  VSTFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLL 191
           V TFNI++N   +   +  A+ L + M + GY PD +T+  LI G+     ++ A + L 
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 192 KEIDEGLIPSLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD--TVNSIFEA 350
             +D G+ P + T+  ++N LC  ++  + +   +TMV  G  P+  T N + E+
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLES 540



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +3

Query: 18  TFNIMINAFTEKLKLDMAEKLYQEMSANGYPPDCYTYRCLIDGFCKVGNIDAAYKFLLKE 197
           TFNI++ +     KLD A  L +EM      PD  T+  LIDGFCK G++D AY    K 
Sbjct: 533 TFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592

Query: 198 IDEGLIP-SLTTFGRVINCLCIKNRVHEAVGLVRTMVSMGIVPD 326
            +  ++  S  T+  +I+    K  V  A  L + MV   + PD
Sbjct: 593 EEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636