BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007890
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   165   4e-39
ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...   160   1e-37
ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab...   159   2e-37
ref|XP_003595366.1| RING-H2 finger protein ATL3J [Medicago trunc...   155   2e-36
gb|AAN32654.1|AF417491_1 RING-H2 protein [Medicago sativa]            154   9e-36

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/130 (63%), Positives = 102/130 (78%), Gaps = 4/130 (3%)
 Frame = -3

Query: 387 IFNSLPLFTFGSLGAKISA--GDCAVCLSKFEHDDQLRLLPLCCHAFHADCIDAWLISNQ 214
           + +SLPLFTFGS+  + S+  GDCAVCLSKFE  DQLRLLP+CCHAFHA CID WL SNQ
Sbjct: 100 LIDSLPLFTFGSVRGRNSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQ 159

Query: 213 TCPLCRSTVHPSESDVLGKIVPN-NRSNSFRIEIGSVSRRRT-DFSGEAPRSYAIGSFEY 40
           TCPLCRS +  +E+D +  I+ + N  +SFRIE+GSVSRRR+   SGEA RSY++GSF+Y
Sbjct: 160 TCPLCRSPIFATEADFMKAILASTNAGDSFRIELGSVSRRRSASESGEARRSYSVGSFDY 219

Query: 39  IVDEEYEVPI 10
           IVD E EV +
Sbjct: 220 IVDHESEVTV 229


>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
           gi|223534172|gb|EEF35888.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/127 (62%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
 Frame = -3

Query: 387 IFNSLPLFTFGSLGAKI--SAGDCAVCLSKFEHDDQLRLLPLCCHAFHADCIDAWLISNQ 214
           I +SLPLFTF S+  +   S+GDCAVCLSKFE  DQLRLLPLCCHAFH  CID WL SNQ
Sbjct: 96  IIDSLPLFTFSSIKRRSTSSSGDCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQ 155

Query: 213 TCPLCRSTVHPSESDVLGKIVPNNR-SNSFRIEIGSVSRRRTDFSGEAPRSYAIGSFEYI 37
           TCPLCRS +H S+SD+L  + P+     SFR+EIGS+SRR+T  + E   SY++GSFEY+
Sbjct: 156 TCPLCRSPIHASDSDLLKSLSPDAAPPESFRLEIGSISRRQT--ASEPRSSYSVGSFEYV 213

Query: 36  VDEEYEV 16
           VDE+ EV
Sbjct: 214 VDEDSEV 220


>ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp.
           lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein
           ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/128 (61%), Positives = 100/128 (78%), Gaps = 8/128 (6%)
 Frame = -3

Query: 387 IFNSLPLFTFGSLGAKISA---GDCAVCLSKFEHDDQLRLLPLCCHAFHADCIDAWLISN 217
           + +SLP+F F S+  + S+   GDCAVCLSKFE ++QLRLLPLCCHAFHADCID WL+SN
Sbjct: 94  VLDSLPIFKFSSVTRRSSSTNSGDCAVCLSKFEPEEQLRLLPLCCHAFHADCIDIWLVSN 153

Query: 216 QTCPLCRSTVHPSESDVLGKIVPNNRS-----NSFRIEIGSVSRRRTDFSGEAPRSYAIG 52
           QTCPLCRS +  SESD++  +V  N +     NSFR+EIGS+SRR+T+ S E  RSY+IG
Sbjct: 154 QTCPLCRSPLFASESDLMKSLVGGNNNSNGGENSFRLEIGSISRRQTE-SVEQHRSYSIG 212

Query: 51  SFEYIVDE 28
           SF+YIVD+
Sbjct: 213 SFDYIVDD 220


>ref|XP_003595366.1| RING-H2 finger protein ATL3J [Medicago truncatula]
           gi|355484414|gb|AES65617.1| RING-H2 finger protein ATL3J
           [Medicago truncatula]
          Length = 298

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/157 (50%), Positives = 109/157 (69%), Gaps = 16/157 (10%)
 Frame = -3

Query: 426 ILPFSXXXXXNTRIFNSLPLFTFGSLGAKIS---AGDCAVCLSKFEHDDQLRLLPLCCHA 256
           + P +     ++ + +SLP+FTF S+  + S   +GDCAVCLSKFE +D LRLLPLCCHA
Sbjct: 46  VSPVTTTSSTSSSVVDSLPIFTFSSIKRRSSTVVSGDCAVCLSKFEQNDLLRLLPLCCHA 105

Query: 255 FHADCIDAWLISNQTCPLCRSTVHPSESDVLGKIVPNNRS---NSFRIEIGSVSRRR--- 94
           FH +CIDAWL SNQTCPLCRS+V  SES+++     ++ S   NSFR+EIG++S RR   
Sbjct: 106 FHTECIDAWLSSNQTCPLCRSSVFASESEIMKIFRSSSTSSGNNSFRLEIGNISNRREAT 165

Query: 93  ------TDFSGEA-PRSYAIGSFEYIVDEEYEVPIGD 4
                  + +GE   R+Y++G+FEY VDEE E+P+G+
Sbjct: 166 ATDNNNNNVAGETDQRTYSVGAFEYFVDEEAEIPVGN 202


>gb|AAN32654.1|AF417491_1 RING-H2 protein [Medicago sativa]
          Length = 295

 Score =  154 bits (388), Expect = 9e-36
 Identities = 78/159 (49%), Positives = 109/159 (68%), Gaps = 18/159 (11%)
 Frame = -3

Query: 426 ILPFSXXXXXNTRIFNSLPLFTFGSLGAKIS---AGDCAVCLSKFEHDDQLRLLPLCCHA 256
           + P +     ++ + +SLP+FTF S+  + S   +GDCAVCLSKFE +D LRLLPLCCHA
Sbjct: 46  VSPVTPTSSTSSSVVDSLPIFTFSSIKRRSSTVVSGDCAVCLSKFEQNDLLRLLPLCCHA 105

Query: 255 FHADCIDAWLISNQTCPLCRSTVHPSESDVLGKIVPNNRS---NSFRIEIGSVSRRR--- 94
           FH +CIDAWL SNQTCPLCRS+V  SES+++     ++ S   NSFR+EIG++S RR   
Sbjct: 106 FHTECIDAWLASNQTCPLCRSSVFVSESEIMKIFRSSSTSSGNNSFRLEIGNISHRREAT 165

Query: 93  --------TDFSGEAP-RSYAIGSFEYIVDEEYEVPIGD 4
                    + +GE   R+Y++G+F+Y VDEE E+P+G+
Sbjct: 166 ATDNNNNNNNVAGETDRRTYSVGAFDYFVDEEAEIPVGN 204