BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007863
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is...   440   e-121
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   440   e-121
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   440   e-121
ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   438   e-121

>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
           vinifera]
          Length = 329

 Score =  440 bits (1131), Expect = e-121
 Identities = 227/273 (83%), Positives = 247/273 (90%), Gaps = 1/273 (0%)
 Frame = +1

Query: 1   ELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGS-QRYGNYPCPPYKIIILDEADSMTE 177
           ELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS  R G YPCPPYKIIILDEADSMTE
Sbjct: 58  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIIILDEADSMTE 117

Query: 178 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMNDRIAYICNE 357
           DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL++EIM+ RI +IC E
Sbjct: 118 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILHICKE 177

Query: 358 ECLDLDSEALSTLSSISQGDLRRAITYLQGTARLCGSTISSNDLINVSGVIPQEVVQAFY 537
           E L+LDSEALSTLSSISQGDLRRAITYLQG ARL GS ISS DLI+VSGV+PQ VVQA +
Sbjct: 178 EELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQHVVQALF 237

Query: 538 SACKSGNFELAEKEANNVIAEGYPVSQMISQLFDLIIGLDDISDEQKARIFKKMGEADKC 717
           +ACKSG+F+ A KE NNVIAEGYPVSQM+ QLFD+++   DISDEQKARI K++ EADKC
Sbjct: 238 AACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADKC 296

Query: 718 LIDGADEYLQLLDVASNAMRALCNMPLEFSSEN 816
           L+DGADEYLQLLDVASNAMRALCNMP EF  E+
Sbjct: 297 LVDGADEYLQLLDVASNAMRALCNMPEEFPHES 329


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 342

 Score =  440 bits (1131), Expect = e-121
 Identities = 221/273 (80%), Positives = 246/273 (90%), Gaps = 1/273 (0%)
 Frame = +1

Query: 1   ELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGS-QRYGNYPCPPYKIIILDEADSMTE 177
           ELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGS QR G YPCPPYKIIILDEADSMTE
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIIILDEADSMTE 129

Query: 178 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMNDRIAYICNE 357
           DAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL++EIM+ R+ +IC E
Sbjct: 130 DAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMSSRVLHICRE 189

Query: 358 ECLDLDSEALSTLSSISQGDLRRAITYLQGTARLCGSTISSNDLINVSGVIPQEVVQAFY 537
           E L+LD+EALSTLS +SQGDLRRAITYLQG ARL GSTISS DLI+VSGVIPQE V A Y
Sbjct: 190 EGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVIPQEAVGALY 249

Query: 538 SACKSGNFELAEKEANNVIAEGYPVSQMISQLFDLIIGLDDISDEQKARIFKKMGEADKC 717
           +AC+SG+F++A KE NN+IAEGYPVSQM+ QL ++++  DDISDEQKA+I K +G ADKC
Sbjct: 250 AACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQICKSLGAADKC 309

Query: 718 LIDGADEYLQLLDVASNAMRALCNMPLEFSSEN 816
           L+DGADEYLQLLDVASN MRALCNMP EF  E+
Sbjct: 310 LVDGADEYLQLLDVASNTMRALCNMPQEFPYES 342


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
           vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
           product [Vitis vinifera]
          Length = 341

 Score =  440 bits (1131), Expect = e-121
 Identities = 227/273 (83%), Positives = 247/273 (90%), Gaps = 1/273 (0%)
 Frame = +1

Query: 1   ELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGS-QRYGNYPCPPYKIIILDEADSMTE 177
           ELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS  R G YPCPPYKIIILDEADSMTE
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIIILDEADSMTE 129

Query: 178 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMNDRIAYICNE 357
           DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL++EIM+ RI +IC E
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILHICKE 189

Query: 358 ECLDLDSEALSTLSSISQGDLRRAITYLQGTARLCGSTISSNDLINVSGVIPQEVVQAFY 537
           E L+LDSEALSTLSSISQGDLRRAITYLQG ARL GS ISS DLI+VSGV+PQ VVQA +
Sbjct: 190 EELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQHVVQALF 249

Query: 538 SACKSGNFELAEKEANNVIAEGYPVSQMISQLFDLIIGLDDISDEQKARIFKKMGEADKC 717
           +ACKSG+F+ A KE NNVIAEGYPVSQM+ QLFD+++   DISDEQKARI K++ EADKC
Sbjct: 250 AACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADKC 308

Query: 718 LIDGADEYLQLLDVASNAMRALCNMPLEFSSEN 816
           L+DGADEYLQLLDVASNAMRALCNMP EF  E+
Sbjct: 309 LVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  439 bits (1129), Expect = e-121
 Identities = 221/270 (81%), Positives = 247/270 (91%), Gaps = 1/270 (0%)
 Frame = +1

Query: 1   ELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGS-QRYGNYPCPPYKIIILDEADSMTE 177
           ELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS QR G YPCPPYKIIILDEADSMTE
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIIILDEADSMTE 129

Query: 178 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMNDRIAYICNE 357
           DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +EIM++RI +ICNE
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMSNRILHICNE 189

Query: 358 ECLDLDSEALSTLSSISQGDLRRAITYLQGTARLCGSTISSNDLINVSGVIPQEVVQAFY 537
           E L LD+EALSTLSS+SQGDLRRAITYLQG ARL GS+ISS DLI+VSG IP+EV +A Y
Sbjct: 190 EGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAIPREVTEAIY 249

Query: 538 SACKSGNFELAEKEANNVIAEGYPVSQMISQLFDLIIGLDDISDEQKARIFKKMGEADKC 717
           +ACK+G+F+LA KE N+VIAEGYPVSQM++QLF++++ +DDISDEQKARI K +  ADKC
Sbjct: 250 AACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARICKSLATADKC 309

Query: 718 LIDGADEYLQLLDVASNAMRALCNMPLEFS 807
           L+DGADEYLQLLDV SN MR+LCNMP EFS
Sbjct: 310 LVDGADEYLQLLDVVSNTMRSLCNMPQEFS 339


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  438 bits (1126), Expect = e-121
 Identities = 226/273 (82%), Positives = 246/273 (90%), Gaps = 1/273 (0%)
 Frame = +1

Query: 1   ELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGS-QRYGNYPCPPYKIIILDEADSMTE 177
           ELYKSRVLELNASDDRGINVVRTKIK+FA VAVGS  R G YPCPPYKIIILDEADSMTE
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIIILDEADSMTE 129

Query: 178 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMNDRIAYICNE 357
           DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL++EIM+ RI +IC E
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILHICKE 189

Query: 358 ECLDLDSEALSTLSSISQGDLRRAITYLQGTARLCGSTISSNDLINVSGVIPQEVVQAFY 537
           E L+LDSEALSTLSSISQGDLRRAITYLQG ARL GS ISS DLI+VSGV+PQ VVQA +
Sbjct: 190 EELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQHVVQALF 249

Query: 538 SACKSGNFELAEKEANNVIAEGYPVSQMISQLFDLIIGLDDISDEQKARIFKKMGEADKC 717
           +ACKSG+F+ A KE NNVIAEGYPVSQM+ QLFD+++   DISDEQKARI K++ EADKC
Sbjct: 250 AACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADKC 308

Query: 718 LIDGADEYLQLLDVASNAMRALCNMPLEFSSEN 816
           L+DGADEYLQLLDVASNAMRALCNMP EF  E+
Sbjct: 309 LVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341