BLASTX nr result

ID: Bupleurum21_contig00007858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007858
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40466.1| unknown [Solanum tuberosum]                             65   1e-08
ref|NP_172068.1| mannose-binding lectin-like protein [Arabidopsi...    58   2e-06

>gb|ABA40466.1| unknown [Solanum tuberosum]
          Length = 162

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = +1

Query: 22  ITLDYPSEYITEVSGCYVGVVDLDDDWDPEEGCFIPSRRYLGSITFHTNKGKYGPYTPPS 201
           + LDYPSE++T +SG YV    L+                  +I F+TNKG YGP+  P+
Sbjct: 67  VLLDYPSEFLTSLSGSYVNNGGLE------------------AIKFNTNKGSYGPFGQPT 108

Query: 202 ETMAVKPNFNYEVGGK--FNGFYGTYTSDGIETIGFYMKPL 318
                  +FN+++G    F GF+GT +S  +++IG Y+KP+
Sbjct: 109 SDAY---HFNFQLGNHSLFGGFHGTTSSYAVDSIGIYVKPV 146


>ref|NP_172068.1| mannose-binding lectin-like protein [Arabidopsis thaliana]
           gi|6850306|gb|AAF29383.1|AC009999_3 Contains similarity
           to a myrosinase-binding protein homolog from Arabidopsis
           thaliana gb|AF054906 and contains a Jacalin-like lectin
           PF|01419 domain [Arabidopsis thaliana]
           gi|332189768|gb|AEE27889.1| mannose-binding lectin-like
           protein [Arabidopsis thaliana]
          Length = 184

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
 Frame = +1

Query: 22  ITLDYPSEYITEVSGCYVGVVDLDDDWDPEEGCFIPSRRYLGSITFHTNKGKYGPYTPPS 201
           I L+ P EYIT +SG Y+            +G   P  R   S+ F TN  +YGP+   S
Sbjct: 74  ILLNCPHEYITGISGEYL----------KSDGASGPQIR---SLAFATNLNQYGPFGGSS 120

Query: 202 ETMAV---KPNFNYEVGG--KFNGFYGTYTSDGIETIGFYMKPLQINRILPDSANSTYS 363
              ++   +  F +++G   +F+GFYGTY + G++ IG Y++P  +      +A  T S
Sbjct: 121 SQSSIWNHEQQFRFKLGKFRQFSGFYGTYNASGLQNIGVYLQPTIVKPTGTRNAEETES 179


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