BLASTX nr result

ID: Bupleurum21_contig00007853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007853
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30926.3| unnamed protein product [Vitis vinifera]              308   3e-81
ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g...   308   3e-81
ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g...   296   6e-78
ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|2...   294   4e-77
ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g...   281   3e-73

>emb|CBI30926.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  308 bits (788), Expect = 3e-81
 Identities = 174/310 (56%), Positives = 203/310 (65%)
 Frame = +1

Query: 4    KIGRVIGKGGASIKSVRQASGARVEVDDKKIDRDECTITITSTEKLDDLKSMAVEAVLLL 183
            KIGRVIG+GG+SIKSVR+ASGA VEVDD K DRDEC IT+TSTE +DDLKSMAVEAVLLL
Sbjct: 129  KIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLL 188

Query: 184  QEKINDEDDDTVSIRLLIPTKVXXXXXXXXXXXXNEIRKRTKADVRISKGNKPKCADDDD 363
            Q KINDEDDDTV+IRLL+P+K+            NEIRKRT+ADVRISK  +PKCAD +D
Sbjct: 189  QAKINDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADAND 248

Query: 364  ELVEVVGKVGSVRDALVQIXXXXXXXXXXXXERNPNPSDGAGLGSVYPASKGLSXXXXXX 543
            EL+EVVG+VGSVRDALVQI            +   N S  AG  S+Y    GLS      
Sbjct: 249  ELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNTS--AGTDSLYSGGAGLSVSSVLP 306

Query: 544  XXXXXXXXGYEQRGDSGSGLNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPPPT 723
                     Y+QR ++GSGL +                                  P P+
Sbjct: 307  SAPPVAPLSYDQRAETGSGLGL-LSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPS 365

Query: 724  ALEMVVPAHALVKVMGKGGTNIGNIQKISGATVDISRSKSSRGDCVALISGTSEQKRAAE 903
              +MV+PA+A+ KVMGKGG NI NI+KISGA ++IS SKSSRGD VALISGT EQKR AE
Sbjct: 366  TFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAE 425

Query: 904  NLIQAFIMST 933
            NLIQAFIM+T
Sbjct: 426  NLIQAFIMAT 435


>ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
          Length = 623

 Score =  308 bits (788), Expect = 3e-81
 Identities = 174/310 (56%), Positives = 203/310 (65%)
 Frame = +1

Query: 4    KIGRVIGKGGASIKSVRQASGARVEVDDKKIDRDECTITITSTEKLDDLKSMAVEAVLLL 183
            KIGRVIG+GG+SIKSVR+ASGA VEVDD K DRDEC IT+TSTE +DDLKSMAVEAVLLL
Sbjct: 317  KIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLL 376

Query: 184  QEKINDEDDDTVSIRLLIPTKVXXXXXXXXXXXXNEIRKRTKADVRISKGNKPKCADDDD 363
            Q KINDEDDDTV+IRLL+P+K+            NEIRKRT+ADVRISK  +PKCAD +D
Sbjct: 377  QAKINDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADAND 436

Query: 364  ELVEVVGKVGSVRDALVQIXXXXXXXXXXXXERNPNPSDGAGLGSVYPASKGLSXXXXXX 543
            EL+EVVG+VGSVRDALVQI            +   N S  AG  S+Y    GLS      
Sbjct: 437  ELIEVVGEVGSVRDALVQIVLRLRDDALKDRDTGHNTS--AGTDSLYSGGAGLSVSSVLP 494

Query: 544  XXXXXXXXGYEQRGDSGSGLNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPPPT 723
                     Y+QR ++GSGL +                                  P P+
Sbjct: 495  SAPPVAPLSYDQRAETGSGLGL-LSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPS 553

Query: 724  ALEMVVPAHALVKVMGKGGTNIGNIQKISGATVDISRSKSSRGDCVALISGTSEQKRAAE 903
              +MV+PA+A+ KVMGKGG NI NI+KISGA ++IS SKSSRGD VALISGT EQKR AE
Sbjct: 554  TFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAE 613

Query: 904  NLIQAFIMST 933
            NLIQAFIM+T
Sbjct: 614  NLIQAFIMAT 623


>ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 625

 Score =  296 bits (759), Expect = 6e-78
 Identities = 170/311 (54%), Positives = 202/311 (64%), Gaps = 1/311 (0%)
 Frame = +1

Query: 4    KIGRVIGKGGASIKSVRQASGARVEVDDKKIDRDECTITITSTEKLDDLKSMAVEAVLLL 183
            KIGRVIGKGG++IKS+RQASGA +EVDD K + DEC I IT+TE   DLKSMAVEAVLL+
Sbjct: 317  KIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLKSMAVEAVLLM 376

Query: 184  QEKINDEDDDTVSIRLLIPTKVXXXXXXXXXXXXNEIRKRTKADVRISKGNKPKCADDDD 363
            Q KINDEDD TVSIRLL+P+KV            NEIRKRTKADVRISKG+KPKCAD +D
Sbjct: 377  QGKINDEDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADAND 436

Query: 364  ELVEVVGKVGSVRDALVQIXXXXXXXXXXXXERNPNPSDGAGLGSVYPASKGLS-XXXXX 540
            ELVEV G V  VRDAL+QI            +   NPS GA   S+YP S GLS      
Sbjct: 437  ELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNPSIGA--ESLYPGSAGLSLPSMMH 494

Query: 541  XXXXXXXXXGYEQRGDSGSGLNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPPP 720
                      Y+ R +SG+GL M                                  PPP
Sbjct: 495  SVPPVAAPMVYDHRAESGAGLGMLSPSSPYGGYGSLPMGDNGYGSMSSYATKLYGGLPPP 554

Query: 721  TALEMVVPAHALVKVMGKGGTNIGNIQKISGATVDISRSKSSRGDCVALISGTSEQKRAA 900
            + L+M++PA+A+ KV+GKGG NI NI+KISGA+++IS +KS+RGD +ALISGT EQKRAA
Sbjct: 555  STLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNKSARGDRIALISGTPEQKRAA 614

Query: 901  ENLIQAFIMST 933
            ENLIQAFIM+T
Sbjct: 615  ENLIQAFIMAT 625


>ref|XP_002305041.1| predicted protein [Populus trichocarpa] gi|222848005|gb|EEE85552.1|
            predicted protein [Populus trichocarpa]
          Length = 623

 Score =  294 bits (752), Expect = 4e-77
 Identities = 165/310 (53%), Positives = 198/310 (63%)
 Frame = +1

Query: 4    KIGRVIGKGGASIKSVRQASGARVEVDDKKIDRDECTITITSTEKLDDLKSMAVEAVLLL 183
            KIGRVIGKGG++IKS+RQ SGAR+EVDD K DRDEC IT+ +TE  DDLKSMAVEA+LLL
Sbjct: 316  KIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATESPDDLKSMAVEAILLL 375

Query: 184  QEKINDEDDDTVSIRLLIPTKVXXXXXXXXXXXXNEIRKRTKADVRISKGNKPKCADDDD 363
            Q KINDED+D V IR L+P+KV            NEIRKRT ADV ISK +K KCAD +D
Sbjct: 376  QGKINDEDNDIVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCISKVDKLKCADSND 435

Query: 364  ELVEVVGKVGSVRDALVQIXXXXXXXXXXXXERNPNPSDGAGLGSVYPASKGLSXXXXXX 543
            ELVEV G+VGSVRDALVQI            E++   +   G  SVYP   G+S      
Sbjct: 436  ELVEVAGEVGSVRDALVQI--VLRLRDDVLKEKDGGLNSSVGTDSVYPVHAGISIPSILP 493

Query: 544  XXXXXXXXGYEQRGDSGSGLNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPPPT 723
                    GY+QR +SGSGL +                                  PPP+
Sbjct: 494  SVPPVAPMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEGLPPPS 553

Query: 724  ALEMVVPAHALVKVMGKGGTNIGNIQKISGATVDISRSKSSRGDCVALISGTSEQKRAAE 903
             LEM+VPA+A+ KV+GKGG NI NI+KISGA ++IS +KS+RGD +A ISG  EQK+AAE
Sbjct: 554  TLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQKQAAE 613

Query: 904  NLIQAFIMST 933
            NLIQAFIM+T
Sbjct: 614  NLIQAFIMAT 623


>ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
            sativus]
          Length = 625

 Score =  281 bits (719), Expect = 3e-73
 Identities = 167/310 (53%), Positives = 195/310 (62%), Gaps = 1/310 (0%)
 Frame = +1

Query: 7    IGRVIGKGGASIKSVRQASGARVEVDDKKIDRDECTITITSTEKLDDLKSMAVEAVLLLQ 186
            IGRVIGKGG +IKS+RQASGARVEVDD K D DEC ITI+S E LDDLKSMAVE VLLLQ
Sbjct: 319  IGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQ 378

Query: 187  EKINDEDDDTVSIRLLIPTKVXXXXXXXXXXXXNEIRKRTKADVRISKGNKPKCADDDDE 366
            EKIND++  TV +RLLIP+KV            NEIRK T+AD+RISKG+K KCA   DE
Sbjct: 379  EKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDE 438

Query: 367  LVEVVGKVGSVRDALVQIXXXXXXXXXXXXERNPNPSDGAGLGSVYPASKGLS-XXXXXX 543
            LVEV GKVG VRDALVQI            ER+   +      S+Y +    S       
Sbjct: 439  LVEVTGKVGCVRDALVQI--VLRLRDDALKERDVGHNSAIVTDSMYSSGSSFSMPSVLPS 496

Query: 544  XXXXXXXXGYEQRGDSGSGLNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPPPT 723
                    GY+QR +SGSGL +                                  PPP+
Sbjct: 497  VSPGAPPMGYDQRAESGSGLGV-LSSSGLYGSGSLSMGDNGYGYMSSYSSKLYGGLPPPS 555

Query: 724  ALEMVVPAHALVKVMGKGGTNIGNIQKISGATVDISRSKSSRGDCVALISGTSEQKRAAE 903
            +LEM++PA+A  KV+GKGG NI NI+KISGA ++IS SKSSRGD +ALISGTSEQKR AE
Sbjct: 556  SLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAE 615

Query: 904  NLIQAFIMST 933
            NLIQAFIM+T
Sbjct: 616  NLIQAFIMAT 625


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