BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007851
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi...   443   e-122
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi...   441   e-121
ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117
ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ...   417   e-114
ref|XP_002879134.1| hypothetical protein ARALYDRAFT_481728 [Arab...   406   e-111

>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
            mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  443 bits (1139), Expect = e-122
 Identities = 212/310 (68%), Positives = 257/310 (82%), Gaps = 1/310 (0%)
 Frame = +1

Query: 1    SQLLPRFSPEELCDVITMQDDPLVCLELFNYAAQQPRFRHNVSSFHITIKKLGAAKMYEE 180
            S++ PRF+ EELC+VI++Q DPLVC ELFN+A+QQPRFRH+ SS+ ITIKKLG AKMYEE
Sbjct: 112  SKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEE 171

Query: 181  MDVIVNQVLAIQSIGSEALYNTMIYYFTEARKLNRAVNIFRHMRGNMKLSCRPSIRTYNL 360
            MD +VNQ LA+ SIGSE LYNTMIY+FTEARKL RAVNIF+HM+ N  L+CRPSIRTYNL
Sbjct: 172  MDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNL 231

Query: 361  LFAALIGREGNSYVNHLYMQSIRGLFKLMIRD-GVEPDIFSLNTMIKGYALSLHLNEALR 537
            LF A + R  N+Y+NH+YM++IR LF+ M+ D G+EPDIFSLN MIKGY LSLH+N+ALR
Sbjct: 232  LFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALR 291

Query: 538  IFHQMEVVYNCPPNSFSYDYLIHGLCAQGRTNNAKELCGQMKEKGFVPSGKSYNSLINAL 717
            IFHQM VVY+C PNS+SYDYLIHGLCAQ RT+NAKELC +MKEKGFVPS  SYNS++NAL
Sbjct: 292  IFHQMGVVYSCLPNSYSYDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNAL 351

Query: 718  ALGGNIDEAVAYLWEMIGERRMADFITYRTLFSEICRHQRSEDAMDLLQDLQRKGIVDRH 897
            AL G +++AV YLWEMI  RR  DFITY+T+  E+CR  +  +A  LL++LQ K +VD H
Sbjct: 352  ALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGH 411

Query: 898  TGRKLQYELK 927
            T RKL Y L+
Sbjct: 412  TYRKLLYVLE 421


>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
            mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  441 bits (1135), Expect = e-121
 Identities = 211/310 (68%), Positives = 257/310 (82%), Gaps = 1/310 (0%)
 Frame = +1

Query: 1    SQLLPRFSPEELCDVITMQDDPLVCLELFNYAAQQPRFRHNVSSFHITIKKLGAAKMYEE 180
            S++ PRF+ EELC+VI++Q DPLVC ELFN+A+QQPRFRH+ SS+ ITIKKLG AKMYEE
Sbjct: 112  SKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEE 171

Query: 181  MDVIVNQVLAIQSIGSEALYNTMIYYFTEARKLNRAVNIFRHMRGNMKLSCRPSIRTYNL 360
            MD +VNQ LA+ SIGSE LYNTMIY+FTEARKL RAVNIF+HM+ N  L+CRPSIRTYNL
Sbjct: 172  MDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNL 231

Query: 361  LFAALIGREGNSYVNHLYMQSIRGLFKLMIRD-GVEPDIFSLNTMIKGYALSLHLNEALR 537
            LF A + R  N+Y+NH+YM++IR LF+ M+ D G+EPDIFSLN MIKGY LSLH+N+ALR
Sbjct: 232  LFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALR 291

Query: 538  IFHQMEVVYNCPPNSFSYDYLIHGLCAQGRTNNAKELCGQMKEKGFVPSGKSYNSLINAL 717
            IFHQM VVY+C PNS+S+DYLIHGLCAQ RT+NAKELC +MKEKGFVPS  SYNS++NAL
Sbjct: 292  IFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNAL 351

Query: 718  ALGGNIDEAVAYLWEMIGERRMADFITYRTLFSEICRHQRSEDAMDLLQDLQRKGIVDRH 897
            AL G +++AV YLWEMI  RR  DFITY+T+  E+CR  +  +A  LL++LQ K +VD H
Sbjct: 352  ALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGH 411

Query: 898  TGRKLQYELK 927
            T RKL Y L+
Sbjct: 412  TYRKLLYVLE 421


>ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|222865910|gb|EEF03041.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  426 bits (1095), Expect = e-117
 Identities = 204/309 (66%), Positives = 254/309 (82%)
 Frame = +1

Query: 1    SQLLPRFSPEELCDVITMQDDPLVCLELFNYAAQQPRFRHNVSSFHITIKKLGAAKMYEE 180
            SQL  RF+ EELC+ IT++DDPLVCLELFN+A+QQ RFRH+ S++H+TIKKLG AKMY+E
Sbjct: 118  SQLPSRFTNEELCNNITLEDDPLVCLELFNWASQQHRFRHDASTYHVTIKKLGIAKMYQE 177

Query: 181  MDVIVNQVLAIQSIGSEALYNTMIYYFTEARKLNRAVNIFRHMRGNMKLSCRPSIRTYNL 360
            MD +VNQ+LA+  IG+EALYN++IYYFTEARKL RAVNIF+ M+ +  L CRPSI+TYN+
Sbjct: 178  MDDVVNQLLAVPHIGNEALYNSIIYYFTEARKLTRAVNIFKRMKSSRNLDCRPSIKTYNI 237

Query: 361  LFAALIGREGNSYVNHLYMQSIRGLFKLMIRDGVEPDIFSLNTMIKGYALSLHLNEALRI 540
            L  A++ R  NSY+NH+YM+++R LFK M+ DGVEPDIFSLN+MIKGYALSLH+N+ALR+
Sbjct: 238  LLTAMLSRGRNSYINHMYMETMRCLFKQMVDDGVEPDIFSLNSMIKGYALSLHVNDALRV 297

Query: 541  FHQMEVVYNCPPNSFSYDYLIHGLCAQGRTNNAKELCGQMKEKGFVPSGKSYNSLINALA 720
            FHQM VVY C PNSFSYDYL+HGLCAQGRTNNA+EL  +MKEKGFV S KS+NSL+NALA
Sbjct: 298  FHQMGVVYKCLPNSFSYDYLVHGLCAQGRTNNARELFDEMKEKGFVLSNKSFNSLVNALA 357

Query: 721  LGGNIDEAVAYLWEMIGERRMADFITYRTLFSEICRHQRSEDAMDLLQDLQRKGIVDRHT 900
            LGG + EAV YLWEMI + R  D ITY+T+  EICR  R  +A  LL++ Q K +VD  T
Sbjct: 358  LGGEVGEAVNYLWEMIDKHRSVDLITYKTVLDEICRQGRIGEATSLLKEWQEKDLVDGIT 417

Query: 901  GRKLQYELK 927
             R+L + L+
Sbjct: 418  YRELLHVLE 426


>ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355507514|gb|AES88656.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  417 bits (1071), Expect = e-114
 Identities = 203/311 (65%), Positives = 254/311 (81%), Gaps = 2/311 (0%)
 Frame = +1

Query: 1    SQLLPRFSPEELCDVITMQDDPLVCLELFNYAAQQPRFRHNVSSFHITIKKLGAAKMYEE 180
            SQLLPRF+PEEL +VI  Q DPLVCLELF++A+ QPRFRHN SSFH+TIKKLG AKMY+E
Sbjct: 89   SQLLPRFTPEELRNVIANQRDPLVCLELFHWASHQPRFRHNESSFHVTIKKLGDAKMYQE 148

Query: 181  MDVIVNQVLAIQSIGSEALYNTMIYYFTEARKLNRAVNIFRHMR--GNMKLSCRPSIRTY 354
            MD +VNQ+LA++SIG+EAL+N +IYYFTEARKL RAV +F+HM+   N     RPSIRTY
Sbjct: 149  MDDVVNQLLAVRSIGNEALFNMIIYYFTEARKLTRAVIVFKHMKCSRNPNFGFRPSIRTY 208

Query: 355  NLLFAALIGREGNSYVNHLYMQSIRGLFKLMIRDGVEPDIFSLNTMIKGYALSLHLNEAL 534
            N+LF A + R  N+++N +YM+++R LF+ M+ + +EPDIFSLN+MIKGY LSLH+N+AL
Sbjct: 209  NILFGAFLSRGYNTHINLVYMETMRCLFRQMVNEHIEPDIFSLNSMIKGYVLSLHVNDAL 268

Query: 535  RIFHQMEVVYNCPPNSFSYDYLIHGLCAQGRTNNAKELCGQMKEKGFVPSGKSYNSLINA 714
            RIFHQM VVY+C PNS +YDYLIHGLCA+GRT NAKEL  +MK KGFVPS KSYNSL+N+
Sbjct: 269  RIFHQMGVVYDCKPNSLTYDYLIHGLCAKGRTENAKELYHEMKAKGFVPSSKSYNSLVNS 328

Query: 715  LALGGNIDEAVAYLWEMIGERRMADFITYRTLFSEICRHQRSEDAMDLLQDLQRKGIVDR 894
            LAL G+++EAV YLWEM  +++  DFITYRT+  EICR  R ++AM  LQ+LQ K +VD 
Sbjct: 329  LALVGDVEEAVNYLWEMTEKQKSVDFITYRTVLDEICRRGRVQEAMRFLQELQEKDLVDG 388

Query: 895  HTGRKLQYELK 927
            HT RKL Y L+
Sbjct: 389  HTYRKLLYVLE 399


>ref|XP_002879134.1| hypothetical protein ARALYDRAFT_481728 [Arabidopsis lyrata subsp.
            lyrata] gi|297324973|gb|EFH55393.1| hypothetical protein
            ARALYDRAFT_481728 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score =  406 bits (1044), Expect = e-111
 Identities = 191/304 (62%), Positives = 246/304 (80%)
 Frame = +1

Query: 1    SQLLPRFSPEELCDVITMQDDPLVCLELFNYAAQQPRFRHNVSSFHITIKKLGAAKMYEE 180
            ++L PRF+PEEL D IT+++DP +C  LFN+A+QQPRF+H   S+HI I+KLGAAKMY+E
Sbjct: 125  TKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFKHVNCSYHIAIRKLGAAKMYKE 184

Query: 181  MDVIVNQVLAIQSIGSEALYNTMIYYFTEARKLNRAVNIFRHMRGNMKLSCRPSIRTYNL 360
            MD IVNQVL+++ IG+E LYN++I+YFT+A KL RAVNIFRHM  +M L CRP+IRTY++
Sbjct: 185  MDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSMNLECRPTIRTYHI 244

Query: 361  LFAALIGREGNSYVNHLYMQSIRGLFKLMIRDGVEPDIFSLNTMIKGYALSLHLNEALRI 540
            LF AL+GR  NSY +H+YM+++R LF+ M+  G+EPD+F+LN ++KGY LSLH+N+ALRI
Sbjct: 245  LFKALLGRGNNSYTSHMYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRI 304

Query: 541  FHQMEVVYNCPPNSFSYDYLIHGLCAQGRTNNAKELCGQMKEKGFVPSGKSYNSLINALA 720
            FHQM VVYNC PNSF+YDYLIHGLCAQGRT NA+EL  +MK KGFVP+GKSYNSL+NA A
Sbjct: 305  FHQMSVVYNCQPNSFTYDYLIHGLCAQGRTINARELLNEMKGKGFVPNGKSYNSLVNAFA 364

Query: 721  LGGNIDEAVAYLWEMIGERRMADFITYRTLFSEICRHQRSEDAMDLLQDLQRKGIVDRHT 900
            L G ID+AV  LWEMI   R+ DFITYRTL  E CR  + ++A  +L+ L+ K +VDR +
Sbjct: 365  LTGEIDDAVKCLWEMIENGRVVDFITYRTLVDESCRKGKYDEATRVLERLREKQLVDRDS 424

Query: 901  GRKL 912
              KL
Sbjct: 425  YEKL 428