BLASTX nr result

ID: Bupleurum21_contig00007832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007832
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vi...    87   2e-15
gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]                               84   9e-15
gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]                               82   4e-14
gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]                               82   6e-14
ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vi...    82   6e-14

>ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/101 (46%), Positives = 59/101 (58%)
 Frame = +1

Query: 1   FSLIPNLEELYLECCTNLIELHQSAGYLKKLTVLNCFRCMNLERFPGDXXXXXXXXXXXX 180
           FS IPNLE L  E CT+L E+HQS G L KL  LN   C NL+ FP              
Sbjct: 669 FSGIPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIELESLKVLILS 728

Query: 181 GCSKLESLPEGLGNSKALVKLLAAGTNIKQFPLSIKYLSNL 303
           GCSKL++ PE L N + L +L   GT IK+ PLS+++L+ L
Sbjct: 729 GCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGL 769



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = +1

Query: 19   LEELYLECCTNLIELHQSAGYLKKLTVLNCFRCMNLERFPGDXXXXXXXXXXXX-GCSKL 195
            L EL+L+  T + EL  S  +L  L +LN   C  L   P               GCS+L
Sbjct: 746  LRELFLDG-TAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCSQL 804

Query: 196  ESLPEGLGNSKALVKLLAAGTNIKQFPLSIKYLSNLQEL 312
            E LPE LGN + LV+L+A G+ + Q P SI  L NL+ L
Sbjct: 805  EKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVL 843


>gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/99 (43%), Positives = 63/99 (63%)
 Frame = +1

Query: 1   FSLIPNLEELYLECCTNLIELHQSAGYLKKLTVLNCFRCMNLERFPGDXXXXXXXXXXXX 180
           F+ IPNLE+L LE CTNL+E+HQS G L+KL +LN   C +++  P +            
Sbjct: 595 FTGIPNLEKLVLEGCTNLVEVHQSTGLLQKLRILNLRNCKSIKSLPSEVHMEFLETFDVS 654

Query: 181 GCSKLESLPEGLGNSKALVKLLAAGTNIKQFPLSIKYLS 297
           GCSKL+ +PE +G  K L +L  +GT +++ P SI++LS
Sbjct: 655 GCSKLKMIPEFVGQMKRLSRLSLSGTAVEKLP-SIEHLS 692


>gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/99 (39%), Positives = 60/99 (60%)
 Frame = +1

Query: 1   FSLIPNLEELYLECCTNLIELHQSAGYLKKLTVLNCFRCMNLERFPGDXXXXXXXXXXXX 180
           F++ PNLE+L LE CTNL+++H S   LK+L + N   C +++  P +            
Sbjct: 647 FTVFPNLEKLVLEGCTNLVKIHPSIALLKRLKLCNFRNCKSIKSLPSELNMEFLETFDIS 706

Query: 181 GCSKLESLPEGLGNSKALVKLLAAGTNIKQFPLSIKYLS 297
           GCSKL+ +PE +G +K L KL   GT +++ P SI++LS
Sbjct: 707 GCSKLKKIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLS 745


>gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/99 (40%), Positives = 60/99 (60%)
 Frame = +1

Query: 1   FSLIPNLEELYLECCTNLIELHQSAGYLKKLTVLNCFRCMNLERFPGDXXXXXXXXXXXX 180
           F+ IPNLE+L LE CTNL+++H S   LK+L + N   C +++  P +            
Sbjct: 616 FTGIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVS 675

Query: 181 GCSKLESLPEGLGNSKALVKLLAAGTNIKQFPLSIKYLS 297
           GCSKL+ +PE +G +K L KL   GT +++ P SI++LS
Sbjct: 676 GCSKLKMIPEFVGQTKRLSKLYLGGTAVEKLPSSIEHLS 714


>ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 47/104 (45%), Positives = 59/104 (56%)
 Frame = +1

Query: 1   FSLIPNLEELYLECCTNLIELHQSAGYLKKLTVLNCFRCMNLERFPGDXXXXXXXXXXXX 180
           FS +PNLE L LE CT+L ELH S G LK+LT LN   C  L+ FP +            
Sbjct: 608 FSSMPNLERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLN 667

Query: 181 GCSKLESLPEGLGNSKALVKLLAAGTNIKQFPLSIKYLSNLQEL 312
            C KL+ +P+ LGN   L KL   G+ IK+ P SI YL +L+ L
Sbjct: 668 QCRKLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEIL 711


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