BLASTX nr result
ID: Bupleurum21_contig00007809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00007809
(1978 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 740 0.0
ref|XP_002303572.1| predicted protein [Populus trichocarpa] gi|2... 731 0.0
ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putativ... 706 0.0
ref|XP_003546841.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 697 0.0
ref|XP_003531472.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 687 0.0
>ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial
[Vitis vinifera] gi|147852111|emb|CAN82264.1|
hypothetical protein VITISV_009282 [Vitis vinifera]
Length = 557
Score = 740 bits (1910), Expect = 0.0
Identities = 391/540 (72%), Positives = 441/540 (81%), Gaps = 2/540 (0%)
Frame = +2
Query: 2 VKKFSRVSRTAPLYKSIRLFTRVSHDNGPLTLTSLGFRDELEMTTKDEENNLHPLMXXXX 181
V K VSR + S+R +RV ++GPLTL SLGF+ E E T ++ LH L
Sbjct: 19 VGKLLHVSR---FHGSVRFLSRVDREHGPLTLASLGFKSEFETTKGNKTKPLHQLNAVPE 75
Query: 182 XXXXXXXGVRSAGVKSVTEKNSREIEGAPFSAKSFSELGLPSLLIERLEREGFTVPTDVQ 361
VRS +K+V K S EIE APF+AKSFSELGLP LLI+RLEREGF+VPTDVQ
Sbjct: 76 VSKNKVKAVRSNEMKAVGTKKSIEIEAAPFAAKSFSELGLPPLLIDRLEREGFSVPTDVQ 135
Query: 362 SSAIPTILENHDVVIQSYTGSGKTLAYLLPILAGVGPL-NEVRNAD-ISRKKMDIEAVIV 535
S+AIPTIL+NHDVVIQSYTGSGKTLAYLLPIL+ VGPL N+ NAD SR KM+IEAVI+
Sbjct: 136 SAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPLKNKPPNADNTSRNKMEIEAVIL 195
Query: 536 APSRELGMQIVREVEKLLGPDDKKLVQQLVGGANRSRQEEALRKNKPIIIVGTPGRLAEI 715
APSRELGMQIVREVEKLLGP DKKLVQQLVGGANR+RQEEAL+KNKP I+VGTPGR+AE+
Sbjct: 196 APSRELGMQIVREVEKLLGPADKKLVQQLVGGANRTRQEEALKKNKPSIVVGTPGRIAEM 255
Query: 716 SAAGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGKRSGSGRNDFKIPTARKAGRQ 895
SA+GKL TH CRYLVLDEVDELLSFNFREDMHRILEHVG+RSG+ + K P R+ RQ
Sbjct: 256 SASGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHVGRRSGADPHGTKSPLERRTERQ 315
Query: 896 TIMVSATVPFSVVRAARSWGCDPLLVQAKKVLSLDSVTPSGPVNLXXXXXXXXXXXXLNA 1075
TIMVSATVPFSV+RAARSWG DPLLVQAK V+ L+S+ P+GPVNL L
Sbjct: 316 TIMVSATVPFSVIRAARSWGRDPLLVQAKSVIPLESL-PTGPVNLLGPTSTSSSSSSL-- 372
Query: 1076 QTSSGVQNLPPALKHYYCVTRLQHKIDTLRRCVHALDAKSVIAFMNHTRQLKDAVYKLEA 1255
QT + + LPP LKHY+CVT+LQHKIDTLRRCVHALDAK VIAFMNHT++LKDAV+KLEA
Sbjct: 373 QTQAAAEGLPPVLKHYFCVTKLQHKIDTLRRCVHALDAKCVIAFMNHTKRLKDAVFKLEA 432
Query: 1256 RGMNAIELHGDLGKLARSTILKKFKSGEVRVLVTNELSARGLDVPECDLVVNLDLPTDSI 1435
RGM A ELHGDLGKLARST LKKFK+GEVRVLVTNELSARGLDV ECDLVVNLDLPTDSI
Sbjct: 433 RGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVSECDLVVNLDLPTDSI 492
Query: 1436 HYAHRAGRTGRLGRKGSVVTICEEREVFVIKKMQKQLAVPIQSCDFAEGKLLVTEDEKTT 1615
HYAHRAGRTGRLGRKG+VV ICEE EVFV+KK+Q+QL VPIQ+C+F EGKL+ T DE+ T
Sbjct: 493 HYAHRAGRTGRLGRKGTVVNICEEPEVFVVKKLQRQLGVPIQACEFTEGKLVATTDEEKT 552
>ref|XP_002303572.1| predicted protein [Populus trichocarpa] gi|222841004|gb|EEE78551.1|
predicted protein [Populus trichocarpa]
Length = 563
Score = 731 bits (1886), Expect = 0.0
Identities = 389/541 (71%), Positives = 439/541 (81%), Gaps = 5/541 (0%)
Frame = +2
Query: 2 VKKFSRVSRTAPLYKSIRLFTRVSHD-NGPLTLTSLGFRDELEMTTKDEENNLHPLMXXX 178
+KK SR S +A +S+R F+RV D N PLTL +LGF E E TTK++ N L +
Sbjct: 19 LKKLSRGSSSALCQRSVRFFSRVDRDKNAPLTLANLGFNTEFETTTKNKRNKLENVKVNY 78
Query: 179 XXXXXXXXGVRSAGVKS--VTEKNSREIEGAPFSAKSFSELGLPSLLIERLEREGFTVPT 352
+ KS V K + EIE APF+AKSFSELGLP LIERLEREGF VPT
Sbjct: 79 PIEAPKSREKVATSNKSRVVRVKKTLEIESAPFAAKSFSELGLPPPLIERLEREGFNVPT 138
Query: 353 DVQSSAIPTILENHDVVIQSYTGSGKTLAYLLPILAGVGPL-NEVRNADISR-KKMDIEA 526
DVQS+AIPTIL+NHD VIQSYTGSGKTLAY+LPIL+ VGPL N +AD KK +IEA
Sbjct: 139 DVQSAAIPTILKNHDAVIQSYTGSGKTLAYVLPILSEVGPLKNNYSSADKETGKKTEIEA 198
Query: 527 VIVAPSRELGMQIVREVEKLLGPDDKKLVQQLVGGANRSRQEEALRKNKPIIIVGTPGRL 706
V+VAPSREL MQIVREVEKLLGP++K++VQQLVGGANRSRQEEAL+KNKP+I+VGTPGR+
Sbjct: 199 VVVAPSRELAMQIVREVEKLLGPENKRVVQQLVGGANRSRQEEALKKNKPLIVVGTPGRI 258
Query: 707 AEISAAGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGKRSGSGRNDFKIPTARKA 886
AEISAAGKLHTH CR+LVLDEVDELLSFNFR+D+HRILEHVG+RSG+ K R A
Sbjct: 259 AEISAAGKLHTHGCRFLVLDEVDELLSFNFRQDIHRILEHVGRRSGADPQGQKNSLVRWA 318
Query: 887 GRQTIMVSATVPFSVVRAARSWGCDPLLVQAKKVLSLDSVTPSGPVNLXXXXXXXXXXXX 1066
R+TIMVSATVPFSVVRAARSW CDPLLVQAK V+ L+S+ P G VNL
Sbjct: 319 DRRTIMVSATVPFSVVRAARSWACDPLLVQAKSVIPLESLAP-GTVNLSSPTSSSNSDSN 377
Query: 1067 LNAQTSSGVQNLPPALKHYYCVTRLQHKIDTLRRCVHALDAKSVIAFMNHTRQLKDAVYK 1246
L Q + VQ+LPPALKHYYCVTRLQHK+DTLRRCVHAL+A+SVIAFMNHTRQLKDAV+K
Sbjct: 378 LQHQAT--VQSLPPALKHYYCVTRLQHKVDTLRRCVHALNAQSVIAFMNHTRQLKDAVFK 435
Query: 1247 LEARGMNAIELHGDLGKLARSTILKKFKSGEVRVLVTNELSARGLDVPECDLVVNLDLPT 1426
LEARGM A ELHGDLGKL RSTILKKFKSGEVRVLVTNEL+ARGLDVPECDLVVNLDLPT
Sbjct: 436 LEARGMKAAELHGDLGKLGRSTILKKFKSGEVRVLVTNELAARGLDVPECDLVVNLDLPT 495
Query: 1427 DSIHYAHRAGRTGRLGRKGSVVTICEEREVFVIKKMQKQLAVPIQSCDFAEGKLLVTEDE 1606
DSIHYAHRAGRTGRLGRKG+VVTICEEREVFV+KK+QKQL VPI +CDF EGKL+VT+ E
Sbjct: 496 DSIHYAHRAGRTGRLGRKGTVVTICEEREVFVVKKLQKQLGVPIPACDFTEGKLIVTDKE 555
Query: 1607 K 1609
+
Sbjct: 556 E 556
>ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549643|gb|EEF51131.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 595
Score = 706 bits (1822), Expect = 0.0
Identities = 374/539 (69%), Positives = 427/539 (79%), Gaps = 5/539 (0%)
Frame = +2
Query: 8 KFSRVSRTAPLYKSIRLFTRVSHDNGPLTLTSLGFRDELEMTTKDEENNLHPLMXXXXXX 187
K RVSRT ++++ +++V D PLTL SLG + + E K + N H
Sbjct: 52 KLLRVSRTGWCHRNVLFYSQVRQDQAPLTLESLGIKSQFERKEKITKTNKHEKFKQNSAI 111
Query: 188 XXXXXGVR--SAGVKSVTEKNSREIEGAPFSAKSFSELGLPSLLIERLEREGFTVPTDVQ 361
V+ + G + V+ S E E A F+AKSFSELGLP LL+ERLE EGF VPT+VQ
Sbjct: 112 DVPRSKVKVVNKGTRDVSVNKSLEDETALFAAKSFSELGLPPLLLERLESEGFKVPTEVQ 171
Query: 362 SSAIPTILENHDVVIQSYTGSGKTLAYLLPILAGVGPL---NEVRNADISRKKMDIEAVI 532
S+AIPTIL+NHDVVIQSYTGSGKTLAYLLPIL+ VGPL + N ++ KK +IEAVI
Sbjct: 172 SAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPLIDKSSKGNEEVG-KKSEIEAVI 230
Query: 533 VAPSRELGMQIVREVEKLLGPDDKKLVQQLVGGANRSRQEEALRKNKPIIIVGTPGRLAE 712
VAPSREL MQIVREVEKLLGP +KK VQQLVGGANRSRQEEALRKNKP IIVGTPGR++E
Sbjct: 231 VAPSRELAMQIVREVEKLLGPANKKAVQQLVGGANRSRQEEALRKNKPAIIVGTPGRISE 290
Query: 713 ISAAGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGKRSGSGRNDFKIPTARKAGR 892
ISAAGKLHTH CRYLVLDEVDELLSFNFRED+HRIL+HVG+RS + + AR+A R
Sbjct: 291 ISAAGKLHTHGCRYLVLDEVDELLSFNFREDVHRILDHVGRRSNADSHGPNSQLARRAAR 350
Query: 893 QTIMVSATVPFSVVRAARSWGCDPLLVQAKKVLSLDSVTPSGPVNLXXXXXXXXXXXXLN 1072
QTI+VSATVPFSV+RAARSWG DPLLVQAK V+ L+SV S PVN N
Sbjct: 351 QTILVSATVPFSVIRAARSWGHDPLLVQAKTVIPLESVPASRPVNASGPISSSSSNS--N 408
Query: 1073 AQTSSGVQNLPPALKHYYCVTRLQHKIDTLRRCVHALDAKSVIAFMNHTRQLKDAVYKLE 1252
Q + +Q+LPPALKHYYCVTR+QHK+DTLRRCVHALDAKSVIAFMN TRQLKDAV+KLE
Sbjct: 409 PQPQAAIQSLPPALKHYYCVTRIQHKVDTLRRCVHALDAKSVIAFMNQTRQLKDAVFKLE 468
Query: 1253 ARGMNAIELHGDLGKLARSTILKKFKSGEVRVLVTNELSARGLDVPECDLVVNLDLPTDS 1432
ARGM A ELHGDLGKL+RSTILKKFK+GEVRVLVTNELSARGLDVPECDLVVNLDLPTDS
Sbjct: 469 ARGMKAAELHGDLGKLSRSTILKKFKNGEVRVLVTNELSARGLDVPECDLVVNLDLPTDS 528
Query: 1433 IHYAHRAGRTGRLGRKGSVVTICEEREVFVIKKMQKQLAVPIQSCDFAEGKLLVTEDEK 1609
IHYAHRAGRTGRLGRKG+VVTICEE EVFV+KKMQKQL + I +C+F EGKL +T +E+
Sbjct: 529 IHYAHRAGRTGRLGRKGTVVTICEESEVFVVKKMQKQLGITIPTCEFTEGKLSMTVEEE 587
>ref|XP_003546841.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like
[Glycine max]
Length = 562
Score = 697 bits (1799), Expect = 0.0
Identities = 364/540 (67%), Positives = 430/540 (79%), Gaps = 7/540 (1%)
Frame = +2
Query: 23 SRTAPLYKSIRLFTRVSHDNGPLTLTSLGFRDELEMTTKDEENNLHPL--MXXXXXXXXX 196
SR+ L+ S++ ++V +G LT++ +G + E E + + N + PL
Sbjct: 26 SRSVLLHTSVKCMSQVEPHHGSLTVSGIGLQTETEPRNRSKTNKVKPLGSPSENRKSKGK 85
Query: 197 XXGVRSAGVKSVTEKNSREIEGAPFSAKSFSELGLPSLLIERLEREGFTVPTDVQSSAIP 376
G+ K+ ++IE APF+A+SFSELGLP +LIERLE+EGFTVPT+VQS+A+P
Sbjct: 86 PLGINEKKKKAFRVVEKQQIESAPFAAESFSELGLPHVLIERLEKEGFTVPTEVQSAAVP 145
Query: 377 TILENHDVVIQSYTGSGKTLAYLLPILAGVGPLNEVR---NAD--ISRKKMDIEAVIVAP 541
TIL NHDV+IQSYTGSGKTLAYLLPIL+ VGPL N+D S KK+ IEAVIVAP
Sbjct: 146 TILNNHDVIIQSYTGSGKTLAYLLPILSVVGPLRGKTPEGNSDGGESGKKLGIEAVIVAP 205
Query: 542 SRELGMQIVREVEKLLGPDDKKLVQQLVGGANRSRQEEALRKNKPIIIVGTPGRLAEISA 721
SRELGMQIVRE EK+LG D+K++VQQLVGGANR+RQE+AL+KNKP I+VGTPGR+AE+SA
Sbjct: 206 SRELGMQIVREFEKVLGMDNKRVVQQLVGGANRTRQEDALKKNKPAIVVGTPGRIAELSA 265
Query: 722 AGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGKRSGSGRNDFKIPTARKAGRQTI 901
+GKL TH CRYLVLDEVDELLSFNFREDMHRILEHVG+RSG+ N +RKA RQ I
Sbjct: 266 SGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHVGRRSGADPNS----DSRKAERQLI 321
Query: 902 MVSATVPFSVVRAARSWGCDPLLVQAKKVLSLDSVTPSGPVNLXXXXXXXXXXXXLNAQT 1081
MVSATVPFSVVRAARSWGCDPLLVQA KV L++V+PS P++L + +
Sbjct: 322 MVSATVPFSVVRAARSWGCDPLLVQANKVAPLETVSPSEPISLSRSSPSSSPSSAM--PS 379
Query: 1082 SSGVQNLPPALKHYYCVTRLQHKIDTLRRCVHALDAKSVIAFMNHTRQLKDAVYKLEARG 1261
+ V++LPPALKHYY VTR+QHK+D LRRC+HALDAK VIAFMNHT+QLKD V+KLEARG
Sbjct: 380 PAAVESLPPALKHYYFVTRVQHKVDVLRRCIHALDAKFVIAFMNHTKQLKDVVFKLEARG 439
Query: 1262 MNAIELHGDLGKLARSTILKKFKSGEVRVLVTNELSARGLDVPECDLVVNLDLPTDSIHY 1441
M A+ELHGDLGKLARST LKKFK+GEVRVLVTNELSARGLDV ECDLVVNLDLPTDSIHY
Sbjct: 440 MKAMELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHY 499
Query: 1442 AHRAGRTGRLGRKGSVVTICEEREVFVIKKMQKQLAVPIQSCDFAEGKLLVTEDEKTTDT 1621
AHRAGRTGRLGR G+VVTICEE EVFV+KK+QKQLA+PI +CDFAEGK LVTE+EKT T
Sbjct: 500 AHRAGRTGRLGRNGTVVTICEESEVFVVKKLQKQLAIPIAACDFAEGKFLVTEEEKTVST 559
>ref|XP_003531472.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47A-like [Glycine max]
Length = 562
Score = 687 bits (1774), Expect = 0.0
Identities = 368/552 (66%), Positives = 432/552 (78%), Gaps = 19/552 (3%)
Frame = +2
Query: 23 SRTAPLY-KSIRLFTRVSHDNGPLTLTSLGFRDELEMTTKDEENNLHPLMXXXXXXXXXX 199
SR+ L+ S++ ++V +G +TL+S+G + E E + + N + PL
Sbjct: 26 SRSVLLHTSSVQCMSQVEPHHGSVTLSSIGLQTETEPRNRSKTNKVKPL----------- 74
Query: 200 XGVRSAGVKS------VTEKNS-------REIEGAPFSAKSFSELGLPSLLIERLEREGF 340
G S +KS + EK ++IE APF+A SFSELGLP +LIERLE+EGF
Sbjct: 75 -GSPSENLKSKGKPFGINEKKKTFRVVEKQQIESAPFAANSFSELGLPLVLIERLEKEGF 133
Query: 341 TVPTDVQSSAIPTILENHDVVIQSYTGSGKTLAYLLPILAGVGPLN-EVRNADISR---- 505
TVPT+VQS+A+PTIL N DV+IQSYTGSGKTLAYLLPIL+ VGPL E+ D
Sbjct: 134 TVPTEVQSAAVPTILNNRDVIIQSYTGSGKTLAYLLPILSVVGPLRGEIGEGDSDGGECG 193
Query: 506 KKMDIEAVIVAPSRELGMQIVREVEKLLGPDDKKLVQQLVGGANRSRQEEALRKNKPIII 685
KK+ IEAVIVAPSRELGMQIVRE EK+LG D+K+ VQQLVGGANR+RQE+AL+KNKP I+
Sbjct: 194 KKLGIEAVIVAPSRELGMQIVREFEKVLGMDNKRAVQQLVGGANRTRQEDALKKNKPAIV 253
Query: 686 VGTPGRLAEISAAGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGKRSGSGRNDFK 865
VGTPGR+AE+SA+GKL TH CR+LVLDEVDELLSFNFREDMHRILEHVG+RSG+ +N
Sbjct: 254 VGTPGRIAELSASGKLRTHSCRFLVLDEVDELLSFNFREDMHRILEHVGRRSGADQNS-- 311
Query: 866 IPTARKAGRQTIMVSATVPFSVVRAARSWGCDPLLVQAKKVLSLDSVTPSGPVNLXXXXX 1045
+RKA RQ IMVSATVPFSVVRAARSWGCDPLLVQAKKV L +V+PS P++L
Sbjct: 312 --DSRKAERQLIMVSATVPFSVVRAARSWGCDPLLVQAKKVAPLGTVSPSEPISLSQSSP 369
Query: 1046 XXXXXXXLNAQTSSGVQNLPPALKHYYCVTRLQHKIDTLRRCVHALDAKSVIAFMNHTRQ 1225
L + + V++LPPALKHYY VTR+QHK+D LRRC+HALDAK VIAFMNHT+Q
Sbjct: 370 SSSPS--LAMPSPAAVESLPPALKHYYFVTRVQHKVDVLRRCIHALDAKFVIAFMNHTKQ 427
Query: 1226 LKDAVYKLEARGMNAIELHGDLGKLARSTILKKFKSGEVRVLVTNELSARGLDVPECDLV 1405
LKD V+KLEARGM A+ELHGDLGKLARST LKKFK+GEVRVLVTNELSARGLDV ECDLV
Sbjct: 428 LKDVVFKLEARGMKAMELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLV 487
Query: 1406 VNLDLPTDSIHYAHRAGRTGRLGRKGSVVTICEEREVFVIKKMQKQLAVPIQSCDFAEGK 1585
VNLDLPTDSIHYAHRAGRTGRLGR G+VVTICEE EVFV+KK+QKQL +PI SCDFAEGK
Sbjct: 488 VNLDLPTDSIHYAHRAGRTGRLGRNGTVVTICEESEVFVVKKLQKQLGIPIASCDFAEGK 547
Query: 1586 LLVTEDEKTTDT 1621
LLV+E+EKT T
Sbjct: 548 LLVSEEEKTVST 559