BLASTX nr result

ID: Bupleurum21_contig00007802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007802
         (1509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glyci...   732   0.0  
ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glyci...   729   0.0  
ref|XP_002322192.1| histone deacetylase [Populus trichocarpa] gi...   727   0.0  
ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricin...   725   0.0  
ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucum...   719   0.0  

>ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 472

 Score =  732 bits (1890), Expect = 0.0
 Identities = 348/425 (81%), Positives = 381/425 (89%)
 Frame = -3

Query: 1399 GASLPTPGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRNMEINC 1220
            GASLP+ G+DAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHR MEIN 
Sbjct: 13   GASLPSSGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINR 72

Query: 1219 PFPAGPEDIRRFHSAEYVDFLSSVTPETLHDTAHSRYLKRFNVGEDCPVFDGLFRFCQAS 1040
            PFPA P DIRRFHS +YVDFLSSV+PETL D+A SR+LKRFNVGEDCPVFDGLF FCQAS
Sbjct: 73   PFPASPADIRRFHSDDYVDFLSSVSPETLADSAFSRHLKRFNVGEDCPVFDGLFPFCQAS 132

Query: 1039 AGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCFVNDIVLGILELLKVHRRVLYI 860
            AGGS+GAAVKLNR DADIAINWAGGLHHAKKSEASGFC+VNDIVLGILELLK HRRVLY+
Sbjct: 133  AGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKAHRRVLYV 192

Query: 859  DIDIHHGDGVEEAFFTTDRVMTVSFHKYGDFFPGTGHIKDIGHGQGKHYALNVPLNDGID 680
            DID+HHGDGVEEAF+TTDRVMTVSFHK+GDFFPGTGH+KDIG G GK+YA+NVPLNDG+D
Sbjct: 193  DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGVGSGKNYAVNVPLNDGMD 252

Query: 679  DESFRNLFQPVIRKVMEAYQPEAVVLQCGADSLAGDRLGVFNLSVKGHADCLRFLRSFNV 500
            DESFR+LF+ +I+KVME YQPEAVVLQCGADSL+GDRLG FNLSV+GHADCLRFLRSFNV
Sbjct: 253  DESFRSLFRSIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNV 312

Query: 499  PLMVLGGGGYTMRNVARCWCYETAVAVGVEPDNRLPYNDYYEYFGPDYTLHVRPNNPHEN 320
            PLMVLGGGGYT+RNVARCWCYETAVAVGVEPDN+LPYN+YYEYFGPDYTL+V P+N  EN
Sbjct: 313  PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVDPSN-MEN 371

Query: 319  KNSSTDLEKIRNLLLEQVSGLPHTPSVQFQTAXXXXXXXXXEDVKMDTRVKPQLWNGEDY 140
             N+S DLEK+RN LLEQ+S LPH PSV FQT           +  MD R K + W+GEDY
Sbjct: 372  LNTSKDLEKLRNTLLEQISRLPHAPSVPFQTTPPTLQLPEEAEENMDRRPKLRKWDGEDY 431

Query: 139  GSDSE 125
             SD E
Sbjct: 432  DSDPE 436


>ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 476

 Score =  729 bits (1881), Expect = 0.0
 Identities = 346/425 (81%), Positives = 380/425 (89%)
 Frame = -3

Query: 1399 GASLPTPGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRNMEINC 1220
            GASLP+ G+DAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHR MEIN 
Sbjct: 17   GASLPSTGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINR 76

Query: 1219 PFPAGPEDIRRFHSAEYVDFLSSVTPETLHDTAHSRYLKRFNVGEDCPVFDGLFRFCQAS 1040
            PFPA P DIRRFHS +YVDFLSSV+PETL D+A SR+LKRFNVGEDCPVFDGLF FCQAS
Sbjct: 77   PFPASPADIRRFHSDDYVDFLSSVSPETLADSAFSRHLKRFNVGEDCPVFDGLFPFCQAS 136

Query: 1039 AGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCFVNDIVLGILELLKVHRRVLYI 860
            AGGS+GAAVKLNR DADIAINWAGGLHHAKKSEASGFC+VNDIVLGILELLKVHRRVLY+
Sbjct: 137  AGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYV 196

Query: 859  DIDIHHGDGVEEAFFTTDRVMTVSFHKYGDFFPGTGHIKDIGHGQGKHYALNVPLNDGID 680
            DID+HHGDGVEEAF+TTDRVMTVSFHK+GDFFPGTGH+KDIG G GK+YA+NVPLNDG+D
Sbjct: 197  DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGVGSGKNYAVNVPLNDGMD 256

Query: 679  DESFRNLFQPVIRKVMEAYQPEAVVLQCGADSLAGDRLGVFNLSVKGHADCLRFLRSFNV 500
            DESFR+LF+ +I+KVME YQPEAVVLQCGADSL+GDRLG FNLSV+GHADCLRFLRSFNV
Sbjct: 257  DESFRSLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNV 316

Query: 499  PLMVLGGGGYTMRNVARCWCYETAVAVGVEPDNRLPYNDYYEYFGPDYTLHVRPNNPHEN 320
            PLMVLGGGGYT+RNVARCWCYETAVAVGVEPDN+LPYN+YYEYFGPDYTL+V P+N  EN
Sbjct: 317  PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVDPSN-MEN 375

Query: 319  KNSSTDLEKIRNLLLEQVSGLPHTPSVQFQTAXXXXXXXXXEDVKMDTRVKPQLWNGEDY 140
             N+  D+EKIRN LLEQ+S LPH P V FQT           +  MD R K + W+GEDY
Sbjct: 376  LNTPKDMEKIRNTLLEQISQLPHAPGVPFQTTPPTLQLPEEAEEDMDRRPKLRKWDGEDY 435

Query: 139  GSDSE 125
             SD +
Sbjct: 436  DSDPD 440


>ref|XP_002322192.1| histone deacetylase [Populus trichocarpa] gi|222869188|gb|EEF06319.1|
            histone deacetylase [Populus trichocarpa]
          Length = 435

 Score =  727 bits (1876), Expect = 0.0
 Identities = 343/425 (80%), Positives = 380/425 (89%)
 Frame = -3

Query: 1399 GASLPTPGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRNMEINC 1220
            GASLP+ GTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY+LHR MEIN 
Sbjct: 7    GASLPSTGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYALHRRMEINR 66

Query: 1219 PFPAGPEDIRRFHSAEYVDFLSSVTPETLHDTAHSRYLKRFNVGEDCPVFDGLFRFCQAS 1040
            PFPAGP DIR+FHS EYV+FLSSV+P+++ D A  R LKRFNVGEDCPVFDGLF FCQAS
Sbjct: 67   PFPAGPTDIRKFHSDEYVEFLSSVSPQSVGDPAFGRQLKRFNVGEDCPVFDGLFGFCQAS 126

Query: 1039 AGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCFVNDIVLGILELLKVHRRVLYI 860
            AGGSIGAAVKLNR DADIA+NWAGGLHHAKKSEASGFC+VNDIVLGILELLKVHRRVLY+
Sbjct: 127  AGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYV 186

Query: 859  DIDIHHGDGVEEAFFTTDRVMTVSFHKYGDFFPGTGHIKDIGHGQGKHYALNVPLNDGID 680
            DID+HHGDGVEEAF+TTDRVMTVSFHKYGDFFPGTGHIKD G GQGK YALN+PLNDG+D
Sbjct: 187  DIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGHIKDTGAGQGKSYALNIPLNDGMD 246

Query: 679  DESFRNLFQPVIRKVMEAYQPEAVVLQCGADSLAGDRLGVFNLSVKGHADCLRFLRSFNV 500
            DE+FR LF+P+I+KVME YQP+AVVLQCGADSL+GDRLG FNLSVKGHADCLRFLRS+NV
Sbjct: 247  DENFRGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNV 306

Query: 499  PLMVLGGGGYTMRNVARCWCYETAVAVGVEPDNRLPYNDYYEYFGPDYTLHVRPNNPHEN 320
            PLMVLGGGGYT+RNVARCWCYETAVAVGVEPDN+LPYN+Y+EYFGPDYTLHV P+N  EN
Sbjct: 307  PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVEPSNV-EN 365

Query: 319  KNSSTDLEKIRNLLLEQVSGLPHTPSVQFQTAXXXXXXXXXEDVKMDTRVKPQLWNGEDY 140
             NS  D+E+IRN+LLEQ+S LP+ PSV FQT           +  MD R K ++WNGED+
Sbjct: 366  LNSPKDMERIRNILLEQLSRLPNAPSVPFQTTPPTTEVPEEAEEDMDQRPKRRIWNGEDF 425

Query: 139  GSDSE 125
             SD +
Sbjct: 426  ESDHD 430


>ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
            gi|223550452|gb|EEF51939.1| histone deacetylase 1, 2 ,3,
            putative [Ricinus communis]
          Length = 468

 Score =  725 bits (1872), Expect = 0.0
 Identities = 344/429 (80%), Positives = 381/429 (88%)
 Frame = -3

Query: 1411 EEFSGASLPTPGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRNM 1232
            +E  GASLP+ GTDAKKRRVTYFYEPTIG+YYYGQGHPMKPHRIRMAHNLIVHYSLHR M
Sbjct: 3    DETGGASLPSTGTDAKKRRVTYFYEPTIGNYYYGQGHPMKPHRIRMAHNLIVHYSLHRRM 62

Query: 1231 EINCPFPAGPEDIRRFHSAEYVDFLSSVTPETLHDTAHSRYLKRFNVGEDCPVFDGLFRF 1052
            EIN PFPA   DIR+FHS +YVDFLSSV+PE+L D AH+R+LKRFNVGEDCPVFDGLF F
Sbjct: 63   EINRPFPASTIDIRKFHSDDYVDFLSSVSPESLADPAHNRHLKRFNVGEDCPVFDGLFGF 122

Query: 1051 CQASAGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCFVNDIVLGILELLKVHRR 872
            CQASAGGS+GAAVKLNR DADIA+NWAGGLHHAKKSEASGFC+VNDIVLGILELLKVHRR
Sbjct: 123  CQASAGGSMGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRR 182

Query: 871  VLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKYGDFFPGTGHIKDIGHGQGKHYALNVPLN 692
            VLY+DID+HHGDGVEEAF+TTDRVMTVSFHK+GDFFPGTGHIKD G GQGK+YALN+PLN
Sbjct: 183  VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGAGQGKNYALNIPLN 242

Query: 691  DGIDDESFRNLFQPVIRKVMEAYQPEAVVLQCGADSLAGDRLGVFNLSVKGHADCLRFLR 512
            DG+DD SFR LF+P+I+KVME YQP+AVVLQCGADSL GDRLG FNLSVKGHADCLRFLR
Sbjct: 243  DGMDDVSFRALFRPIIQKVMEVYQPDAVVLQCGADSLTGDRLGCFNLSVKGHADCLRFLR 302

Query: 511  SFNVPLMVLGGGGYTMRNVARCWCYETAVAVGVEPDNRLPYNDYYEYFGPDYTLHVRPNN 332
            SFNVPLMVLGGGGYT+RNVARCWCYETAVAVGVEPDN+LPYN+YYEYFGPDYTLH+ P+N
Sbjct: 303  SFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHIDPSN 362

Query: 331  PHENKNSSTDLEKIRNLLLEQVSGLPHTPSVQFQTAXXXXXXXXXEDVKMDTRVKPQLWN 152
              EN NS  D+E+IRN+LLEQ+S LP+ PSV FQT           D +MD R K ++W+
Sbjct: 363  -MENLNSPKDMERIRNILLEQLSKLPNAPSVPFQTTPAITEVPEEGDEEMDRRPKRRIWD 421

Query: 151  GEDYGSDSE 125
            GE Y S  E
Sbjct: 422  GEGYESPDE 430


>ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
            gi|449523768|ref|XP_004168895.1| PREDICTED: histone
            deacetylase 6-like [Cucumis sativus]
          Length = 465

 Score =  719 bits (1857), Expect = 0.0
 Identities = 345/425 (81%), Positives = 379/425 (89%)
 Frame = -3

Query: 1399 GASLPTPGTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRNMEINC 1220
            GASLP+ G D +KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY LHR MEIN 
Sbjct: 8    GASLPS-GPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINR 66

Query: 1219 PFPAGPEDIRRFHSAEYVDFLSSVTPETLHDTAHSRYLKRFNVGEDCPVFDGLFRFCQAS 1040
            P+PAGPEDIRRFHS +YVDFL+SV+PETL D A SR+LKRFNVGEDCPVFDGLF FCQAS
Sbjct: 67   PYPAGPEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQAS 126

Query: 1039 AGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCFVNDIVLGILELLKVHRRVLYI 860
            AGGSIGAAVKLNR DADIAINWAGGLHHAKKSEASGFC+VNDIVLGILELLK H+RVLYI
Sbjct: 127  AGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYI 186

Query: 859  DIDIHHGDGVEEAFFTTDRVMTVSFHKYGDFFPGTGHIKDIGHGQGKHYALNVPLNDGID 680
            DID+HHGDGVEEAF+TTDRVMTVSFHK+GDFFPGTGHIKD+G G GK+YALNVPLNDG+D
Sbjct: 187  DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGTGKNYALNVPLNDGMD 246

Query: 679  DESFRNLFQPVIRKVMEAYQPEAVVLQCGADSLAGDRLGVFNLSVKGHADCLRFLRSFNV 500
            D+SFR LF+P+I+KVME YQP+AVVLQCGADSL+GDRLG FNLSVKGHADCLRFLRSFNV
Sbjct: 247  DDSFRGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNV 306

Query: 499  PLMVLGGGGYTMRNVARCWCYETAVAVGVEPDNRLPYNDYYEYFGPDYTLHVRPNNPHEN 320
            PLMVLGGGGYT+RNVARCWCYETAVAVGVEPDN+LPYN+Y+EYFGPDY LH+ P+N  EN
Sbjct: 307  PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYALHIEPSN-MEN 365

Query: 319  KNSSTDLEKIRNLLLEQVSGLPHTPSVQFQTAXXXXXXXXXEDVKMDTRVKPQLWNGEDY 140
             NS  D+EKIRN LLEQ+S LPH PSV FQ           E+  ++ R K ++WNGEDY
Sbjct: 366  LNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEIPEEVEE-SIERRPKRRIWNGEDY 424

Query: 139  GSDSE 125
             SDSE
Sbjct: 425  DSDSE 429


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