BLASTX nr result

ID: Bupleurum21_contig00007796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007796
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34389.1| unknown [Medicago truncatula]                          110   1e-22
ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula] g...   110   1e-22
ref|NP_001242472.1| uncharacterized protein LOC100800402 [Glycin...   105   4e-21
ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycin...   104   9e-21
ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula] g...   104   9e-21

>gb|AFK34389.1| unknown [Medicago truncatula]
          Length = 275

 Score =  110 bits (275), Expect = 1e-22
 Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
 Frame = +1

Query: 82  LPQELIEDIVSRTTPLDVCGNLSLVSRRFLSAAISDNVWNKFLPADLISRLAVSNTLPNL 261
           LP+  I  ++S TTP+D C  LS +S+ FLSA+ SD VWN+FLP+D+ S ++   +L N+
Sbjct: 7   LPEGCIAAVLSSTTPVDAC-RLSFISKNFLSASDSDAVWNRFLPSDISSIISQFPSLSNI 65

Query: 262 PTRKDLYLFLSDNPSVIDDGAMYFWLDKPSGNKCYHIVSDKLSISEPDT---WATRTTDY 432
           PT+KDLY+ LSD P +ID+G   F L++ SG KCY + +  L+I+  DT   W       
Sbjct: 66  PTKKDLYIALSDRPIIIDNGKKSFQLERKSGKKCYMLSARSLAITWGDTDQYWNWTVMPE 125

Query: 433 GYIFGSEVPEMQFVHHLEVDGKIST 507
                 EV E+  V  LE+ GK++T
Sbjct: 126 SRF--PEVAELLHVCWLEIRGKLNT 148


>ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355479928|gb|AES61131.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score =  110 bits (275), Expect = 1e-22
 Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
 Frame = +1

Query: 82  LPQELIEDIVSRTTPLDVCGNLSLVSRRFLSAAISDNVWNKFLPADLISRLAVSNTLPNL 261
           LP+  I  ++S TTP+D C  LS +S+ FLSA+ SD VWN+FLP+D+ S ++   +L N+
Sbjct: 7   LPEGCIAAVLSSTTPVDAC-RLSFISKNFLSASDSDAVWNRFLPSDISSIISQFPSLSNI 65

Query: 262 PTRKDLYLFLSDNPSVIDDGAMYFWLDKPSGNKCYHIVSDKLSISEPDT---WATRTTDY 432
           PT+KDLY+ LSD P +ID+G   F L++ SG KCY + +  L+I+  DT   W       
Sbjct: 66  PTKKDLYIALSDRPIIIDNGKKSFQLERKSGKKCYMLSARSLAITWGDTDQYWNWTVMPE 125

Query: 433 GYIFGSEVPEMQFVHHLEVDGKIST 507
                 EV E+  V  LE+ GK++T
Sbjct: 126 SRF--PEVAELLHVCWLEIRGKLNT 148


>ref|NP_001242472.1| uncharacterized protein LOC100800402 [Glycine max]
           gi|255632332|gb|ACU16524.1| unknown [Glycine max]
          Length = 254

 Score =  105 bits (262), Expect = 4e-21
 Identities = 66/144 (45%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
 Frame = +1

Query: 82  LPQELIEDIVSRTTPLDVCGNLSLVSRRFLSAAISDNVWNKFLPADLISRLAVSNTLPNL 261
           LP+  I  I+SRTTP DVC   S+VS+ F S A SD VW +FLP+D  S ++ S +  N 
Sbjct: 6   LPEGCIASILSRTTPADVC-RFSVVSKIFRSTAESDAVWKRFLPSDYHSIISQSPSPLNY 64

Query: 262 PTRKDLYLFLSDNPSVIDDGAMYFWLDKPSGNKCYHIVSDKLSISEPDT--WATRTTDYG 435
           P++K+LYL LSD P +ID G   F L+K SG KCY + +  LSI   DT  +   TTD  
Sbjct: 65  PSKKELYLALSDRPIIIDQGKKSFQLEKKSGKKCYMLAARALSIIWGDTEQYWNWTTDTN 124

Query: 436 YIFGSEVPEMQFVHHLEVDGKIST 507
             F  EV E++ V  LE+ G ++T
Sbjct: 125 SRF-PEVAELRDVCWLEIRGVLNT 147


>ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycine max]
          Length = 303

 Score =  104 bits (259), Expect = 9e-21
 Identities = 69/147 (46%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
 Frame = +1

Query: 76  NALPQELIEDIVSRTTPLDVCGNLSLVSRRFLSAAISDNVWNKFLPADLISRLAVSNTLP 255
           N LP+  I +I+S T+P DVC  LSL+S  F SAA SD VWNKFLP+D  + L+ S++L 
Sbjct: 10  NNLPEGCIANILSFTSPRDVC-RLSLLSSTFRSAAQSDAVWNKFLPSDFHTILSQSSSL- 67

Query: 256 NLPTRKDLYLFLSDNPSVIDDGAMYFWLDKPSGNKCYHIVSDKLSISEPDT---WATRTT 426
           +LP++KDL+L+L   P +IDDG   F LDK  G KCY + +  L I   DT   W  R T
Sbjct: 68  SLPSKKDLFLYLCQKPLLIDDGKKSFQLDKVYGKKCYMLSARNLFIVWGDTPRYW--RWT 125

Query: 427 DYGYIFGSEVPEMQFVHHLEVDGKIST 507
                  SEV E++ V  LE+ G I+T
Sbjct: 126 SLPDARFSEVAELRSVCWLEIRGWINT 152


>ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355504305|gb|AES85508.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score =  104 bits (259), Expect = 9e-21
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
 Frame = +1

Query: 70  GINALPQELIEDIVSRTTPLDVCGNLSLVSRRFLSAAISDNVWNKFLPADLISRLAVSNT 249
           G   L +  I  I+SRTTP+D  G LS+VS+ FLSAA SD VWN FLP+D+ S ++ S +
Sbjct: 3   GFEDLAEGCISSILSRTTPVDA-GRLSVVSKTFLSAADSDAVWNHFLPSDVNSIISQSPS 61

Query: 250 LPNLPTRKDLYLFLSDNPSVIDDGAMYFWLDKPSGNKCYHIVSDKLSISEPDT---WA-T 417
           L N P++K LYL LSD P +IDD    F LD+ SG KCY + +  L I   D    W  T
Sbjct: 62  LANAPSKKALYLTLSDRPIIIDDAKKSFQLDRKSGKKCYMLAARSLHIIWGDDDRYWIWT 121

Query: 418 RTTDYGYIFGSEVPEMQFVHHLEVDGKIS 504
              D  +    EV  ++ V  LE+ G I+
Sbjct: 122 AMPDSRF---PEVANLRLVWWLEIRGMIN 147


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