BLASTX nr result

ID: Bupleurum21_contig00007761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007761
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g...   142   3e-32
ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g...   142   3e-32
ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus ...   140   1e-31
ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g...   140   1e-31
emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]   140   1e-31

>ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
           [Cucumis sativus]
          Length = 531

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/96 (68%), Positives = 84/96 (87%)
 Frame = -3

Query: 289 VEVDDEFDDKTALCSAQDALLMVHNVISTALASSSDSDKKERDMEECRILVPASQSANII 110
           VEVDDEF+D+  LC+AQDALL VH  I+ ALAS+ D D+K+RD E+C+IL+P+SQSAN+I
Sbjct: 95  VEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANVI 154

Query: 109 GKSGSTIKKLRSKTRTNIRVTSKDASDPTHSCAMHF 2
           GK+GSTIKKLRSKTRT+I+++ KDA+DP HSCAM F
Sbjct: 155 GKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDF 190


>ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 625

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/96 (68%), Positives = 84/96 (87%)
 Frame = -3

Query: 289 VEVDDEFDDKTALCSAQDALLMVHNVISTALASSSDSDKKERDMEECRILVPASQSANII 110
           VEVDDEF+D+  LC+AQDALL VH  I+ ALAS+ D D+K+RD E+C+IL+P+SQSAN+I
Sbjct: 95  VEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANVI 154

Query: 109 GKSGSTIKKLRSKTRTNIRVTSKDASDPTHSCAMHF 2
           GK+GSTIKKLRSKTRT+I+++ KDA+DP HSCAM F
Sbjct: 155 GKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDF 190


>ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 462

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/96 (71%), Positives = 80/96 (83%)
 Frame = -3

Query: 289 VEVDDEFDDKTALCSAQDALLMVHNVISTALASSSDSDKKERDMEECRILVPASQSANII 110
           VE+DDEF D    C+AQDALL VH+ IS A++S  DSD+K +D EECRILVP+SQSANII
Sbjct: 98  VELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEECRILVPSSQSANII 157

Query: 109 GKSGSTIKKLRSKTRTNIRVTSKDASDPTHSCAMHF 2
           GK+G+TIKKLRSKTR  I+VT KDASDPTHSCAM F
Sbjct: 158 GKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDF 193


>ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
          Length = 623

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/96 (68%), Positives = 83/96 (86%)
 Frame = -3

Query: 289 VEVDDEFDDKTALCSAQDALLMVHNVISTALASSSDSDKKERDMEECRILVPASQSANII 110
           VEVDDEF+DK  LC AQDALL VH  I  A+AS  +SDKK++D EEC+ILVP+SQSAN+I
Sbjct: 96  VEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVI 155

Query: 109 GKSGSTIKKLRSKTRTNIRVTSKDASDPTHSCAMHF 2
           GK+G+TIK+LRSKTR NI++T+KD++DP+HSCAM F
Sbjct: 156 GKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEF 191


>emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
          Length = 637

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/96 (68%), Positives = 83/96 (86%)
 Frame = -3

Query: 289 VEVDDEFDDKTALCSAQDALLMVHNVISTALASSSDSDKKERDMEECRILVPASQSANII 110
           VEVDDEF+DK  LC AQDALL VH  I  A+AS  +SDKK++D EEC+ILVP+SQSAN+I
Sbjct: 96  VEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVI 155

Query: 109 GKSGSTIKKLRSKTRTNIRVTSKDASDPTHSCAMHF 2
           GK+G+TIK+LRSKTR NI++T+KD++DP+HSCAM F
Sbjct: 156 GKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEF 191


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