BLASTX nr result

ID: Bupleurum21_contig00007750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007750
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|...    85   7e-15
ref|XP_002870588.1| translation elongation factor EF-1 alpha [Ar...    85   7e-15
ref|XP_002868555.1| AT.I.24-9 protein [Arabidopsis lyrata subsp....    85   7e-15
ref|XP_002526361.1| hypothetical protein RCOM_1399970 [Ricinus c...    85   7e-15
ref|XP_004167073.1| PREDICTED: uncharacterized protein LOC101224...    83   2e-14

>ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata]
           gi|297320893|gb|EFH51315.1| ATRNL [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1064

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/50 (76%), Positives = 42/50 (84%)
 Frame = -2

Query: 155 LVKMPLLKPDRIPLPESIKSTLEEGINLFKLHSNRHGRSDSTKGTYAQEW 6
           L+KMPLLK DR PLP+ +KS LEEGINLF LHS RHGR +STKGTYA EW
Sbjct: 808 LIKMPLLKSDRTPLPDPVKSVLEEGINLFNLHSRRHGRLESTKGTYAAEW 857



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -1

Query: 294 IPGCAKSGLCKEILSSTGGLGDDRPLHSLMGDLVK 190
           IPGCAKS LCKE+L++ GG GDDRP+H+LMGDLVK
Sbjct: 655 IPGCAKSALCKELLNAPGGFGDDRPVHTLMGDLVK 689


>ref|XP_002870588.1| translation elongation factor EF-1 alpha [Arabidopsis lyrata subsp.
           lyrata] gi|297316424|gb|EFH46847.1| translation
           elongation factor EF-1 alpha [Arabidopsis lyrata subsp.
           lyrata]
          Length = 381

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/50 (76%), Positives = 42/50 (84%)
 Frame = -2

Query: 155 LVKMPLLKPDRIPLPESIKSTLEEGINLFKLHSNRHGRSDSTKGTYAQEW 6
           L+KMPLLK DR PLP+ +KS LEEGINLF LHS RHGR +STKGTYA EW
Sbjct: 125 LIKMPLLKSDRTPLPDPVKSVLEEGINLFNLHSRRHGRLESTKGTYAAEW 174


>ref|XP_002868555.1| AT.I.24-9 protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314391|gb|EFH44814.1| AT.I.24-9 protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 768

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/50 (76%), Positives = 42/50 (84%)
 Frame = -2

Query: 155 LVKMPLLKPDRIPLPESIKSTLEEGINLFKLHSNRHGRSDSTKGTYAQEW 6
           L+KMPLLK DR PLP+ +KS LEEGINLF LHS RHGR +STKGTYA EW
Sbjct: 512 LIKMPLLKSDRTPLPDPVKSVLEEGINLFNLHSRRHGRLESTKGTYAAEW 561



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -1

Query: 294 IPGCAKSGLCKEILSSTGGLGDDRPLHSLMGDLVK 190
           IPGCAKS LCKE+L++ GG GDDRP+H+LMGDLVK
Sbjct: 359 IPGCAKSALCKELLNAPGGFGDDRPVHTLMGDLVK 393


>ref|XP_002526361.1| hypothetical protein RCOM_1399970 [Ricinus communis]
           gi|223534320|gb|EEF36032.1| hypothetical protein
           RCOM_1399970 [Ricinus communis]
          Length = 1073

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/51 (72%), Positives = 46/51 (90%)
 Frame = -2

Query: 155 LVKMPLLKPDRIPLPESIKSTLEEGINLFKLHSNRHGRSDSTKGTYAQEWA 3
           LVKMPLLK DR PLP+ ++S LEEGINL++LH+NRHGR +STKG+YA+EWA
Sbjct: 792 LVKMPLLKSDRSPLPDPVRSILEEGINLYRLHTNRHGRLESTKGSYAKEWA 842



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 294 IPGCAKSGLCKEILSSTGGLGDDRPLHSLMGDLVK 190
           IPGCAKS LCKE+L++ GGLGDDRP+HSLMGDLVK
Sbjct: 639 IPGCAKSALCKELLNAPGGLGDDRPIHSLMGDLVK 673


>ref|XP_004167073.1| PREDICTED: uncharacterized protein LOC101224355, partial [Cucumis
           sativus]
          Length = 341

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/51 (72%), Positives = 46/51 (90%)
 Frame = -2

Query: 155 LVKMPLLKPDRIPLPESIKSTLEEGINLFKLHSNRHGRSDSTKGTYAQEWA 3
           LVKMPLLK DR PLP+ +K+ LEEGI+L+KLH++RHGR DSTKG+YA+EWA
Sbjct: 87  LVKMPLLKSDRNPLPDDLKTILEEGISLYKLHTSRHGRVDSTKGSYAKEWA 137


Top