BLASTX nr result

ID: Bupleurum21_contig00007744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007744
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26542.1| unknown [Picea sitchensis]                              70   2e-10
ref|XP_002311269.1| predicted protein [Populus trichocarpa] gi|1...    69   3e-10
ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|1...    69   3e-10
dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Gro...    69   5e-10
ref|XP_003575024.1| PREDICTED: U6 snRNA-associated Sm-like prote...    69   5e-10

>gb|ABK26542.1| unknown [Picea sitchensis]
          Length = 91

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   EEYVNGQLKNKYGDAFIRGNNVLYISTSKSTHGDGA 110
           EEYVNGQLKNKYGDAFIRGNNVLYISTSK T G+GA
Sbjct: 56  EEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLGEGA 91


>ref|XP_002311269.1| predicted protein [Populus trichocarpa] gi|118483023|gb|ABK93423.1|
           unknown [Populus trichocarpa]
           gi|222851089|gb|EEE88636.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/36 (91%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   EEYVNGQLKNKYGDAFIRGNNVLYISTSKSTHGDGA 110
           EEYVNGQLKNKYGDAFIRGNNVLYISTSK T  DGA
Sbjct: 56  EEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLADGA 91


>ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|118482915|gb|ABK93371.1|
           unknown [Populus trichocarpa]
           gi|222865208|gb|EEF02339.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/36 (91%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   EEYVNGQLKNKYGDAFIRGNNVLYISTSKSTHGDGA 110
           EEYVNGQLKNKYGDAFIRGNNVLYISTSK T  DGA
Sbjct: 56  EEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLADGA 91


>dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Group]
           gi|215765012|dbj|BAG86709.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222622927|gb|EEE57059.1| hypothetical protein
           OsJ_06869 [Oryza sativa Japonica Group]
          Length = 101

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/36 (91%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   EEYVNGQLKNKYGDAFIRGNNVLYISTSKSTHGDGA 110
           EEYVNGQLKNKYGDAFIRGNNVLYISTSK T  DGA
Sbjct: 66  EEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 101


>ref|XP_003575024.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           [Brachypodium distachyon]
          Length = 98

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/36 (91%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   EEYVNGQLKNKYGDAFIRGNNVLYISTSKSTHGDGA 110
           EEYVNGQLKNKYGDAFIRGNNVLYISTSK T  DGA
Sbjct: 63  EEYVNGQLKNKYGDAFIRGNNVLYISTSKRTVEDGA 98


Top