BLASTX nr result

ID: Bupleurum21_contig00007732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007732
         (1540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307913.1| predicted protein [Populus trichocarpa] gi|2...   838   0.0  
tpg|DAA59557.1| TPA: putative aminotransferase class III superfa...   828   0.0  
ref|NP_001233777.1| gamma aminobutyrate transaminase 3, chloropl...   828   0.0  
ref|XP_004147736.1| PREDICTED: gamma aminobutyrate transaminase ...   827   0.0  
gb|AFS28621.1| gamma-aminobutyrate transaminase 2 [Malus x domes...   824   0.0  

>ref|XP_002307913.1| predicted protein [Populus trichocarpa] gi|222853889|gb|EEE91436.1|
            predicted protein [Populus trichocarpa]
          Length = 514

 Score =  838 bits (2165), Expect = 0.0
 Identities = 405/470 (86%), Positives = 441/470 (93%), Gaps = 3/470 (0%)
 Frame = +3

Query: 9    SSDASLQKD---INDEGYRGHDMLAPFTAGWQTTDSNPLVIAKSEGSYVYDTNGKKYLDA 179
            S+ ASLQK+   I+   ++GHDMLAPFTAGWQ++D NPLVI KSEGSYVYD NGKKYLDA
Sbjct: 43   STKASLQKEDSTIDGNSFKGHDMLAPFTAGWQSSDLNPLVIEKSEGSYVYDINGKKYLDA 102

Query: 180  LAGLWCTSLGGNEPRLVEAAVKQLSTLPFYHSFWNRTTKPSLDLAKELLEMFTANKMAKV 359
            LAGLWCT+LGGNEPRLV AA +QL+ LPFYHSFWNRTTKPSLDLAKELLE FTA+KMAK 
Sbjct: 103  LAGLWCTALGGNEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLETFTASKMAKA 162

Query: 360  FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFD 539
            FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFD
Sbjct: 163  FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFD 222

Query: 540  LPAPFVLHTDCPHYWRHHLPGETEEEFSTRLANNLEELILKEGPDTVAAFIAEPVMGAGG 719
            LPAPFVLHTDCPHYWR+HLPGETEEEFSTRLANNLE LILKEGP+T+AAFIAEPVMGAGG
Sbjct: 223  LPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGG 282

Query: 720  VIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSIAKALSSG 899
            VIPPPATYF+KIQAVVKKY+ILFIADEVICAFGRLGTM+GCDKYNIKPDLVS+AKALSS 
Sbjct: 283  VIPPPATYFDKIQAVVKKYEILFIADEVICAFGRLGTMYGCDKYNIKPDLVSVAKALSSA 342

Query: 900  YMPIGAVFVSPEVSDVIYSQSNKLGTFSHGFTYSGHPVSCAVALETLKIYKERNIVDQVK 1079
            YMPIGAV VSPEVSDVI+SQS+KLG+FSHGFTYSGHPV+CAVA+E LKIYKERNI+DQV 
Sbjct: 343  YMPIGAVMVSPEVSDVIHSQSSKLGSFSHGFTYSGHPVACAVAIEALKIYKERNILDQVN 402

Query: 1080 ILSPKFQDGIKAYSNSPIIGEIRGTGLIIGTEFTDNKSPNDLFPPEWGVGAYFGAQCEKQ 1259
             ++PKFQDG+KA+++SPIIGEIRGTGLI+GTEF DNKSPND FPPEWGVGAYFGAQCEK 
Sbjct: 403  RIAPKFQDGVKAFADSPIIGEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAQCEKD 462

Query: 1260 GMLVRVAGDNIMMCPPFIITTEELDELISKYGAALKATEERVKELKAQQK 1409
            GMLVRVAGDNIMM PPFI++ EE+D LISKYG AL+ATEERVKELK+Q K
Sbjct: 463  GMLVRVAGDNIMMSPPFIMSPEEVDVLISKYGKALRATEERVKELKSQHK 512


>tpg|DAA59557.1| TPA: putative aminotransferase class III superfamily protein, partial
            [Zea mays]
          Length = 447

 Score =  828 bits (2139), Expect = 0.0
 Identities = 398/447 (89%), Positives = 427/447 (95%)
 Frame = +3

Query: 66   MLAPFTAGWQTTDSNPLVIAKSEGSYVYDTNGKKYLDALAGLWCTSLGGNEPRLVEAAVK 245
            MLAPFTAGWQTTD +PLVI KSEGSYVYD NGKKYLD+LAGLWCT+LGGNEPRLVEAA  
Sbjct: 1    MLAPFTAGWQTTDLHPLVIEKSEGSYVYDANGKKYLDSLAGLWCTALGGNEPRLVEAATA 60

Query: 246  QLSTLPFYHSFWNRTTKPSLDLAKELLEMFTANKMAKVFFTNSGSEANDTQVKLVWYYNN 425
            QL+ LPFYHSFWNRTTKPSLDLAK+LLE FTA KMAKVFFTNSGSEANDTQVKLVWYYNN
Sbjct: 61   QLNKLPFYHSFWNRTTKPSLDLAKDLLETFTATKMAKVFFTNSGSEANDTQVKLVWYYNN 120

Query: 426  ALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRHHLPGE 605
            ALGRPNKKKFIARAKSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPHYWR+HL GE
Sbjct: 121  ALGRPNKKKFIARAKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLEGE 180

Query: 606  TEEEFSTRLANNLEELILKEGPDTVAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDIL 785
            TEEEFSTRLANNLE LILKEGP+T+AAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDIL
Sbjct: 181  TEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDIL 240

Query: 786  FIADEVICAFGRLGTMFGCDKYNIKPDLVSIAKALSSGYMPIGAVFVSPEVSDVIYSQSN 965
            FIADEVICAFGRLGTMFGCDKYNIKPDLVS+AKALSS YMPIGAV VSPEVS+VIYSQSN
Sbjct: 241  FIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVMVSPEVSEVIYSQSN 300

Query: 966  KLGTFSHGFTYSGHPVSCAVALETLKIYKERNIVDQVKILSPKFQDGIKAYSNSPIIGEI 1145
            KLG+FSHGFTYSGHPVSCAVA+E LK+YKERNIV++VK +SP+FQDG+K++S+SPI+GEI
Sbjct: 301  KLGSFSHGFTYSGHPVSCAVAIEALKLYKERNIVEKVKTISPRFQDGLKSFSDSPIVGEI 360

Query: 1146 RGTGLIIGTEFTDNKSPNDLFPPEWGVGAYFGAQCEKQGMLVRVAGDNIMMCPPFIITTE 1325
            RGTGLI+GTEFTDNKSPN+ FPPEWGVG YFGAQCEK G+LVRVAGDNIMM PPFIIT +
Sbjct: 361  RGTGLILGTEFTDNKSPNNPFPPEWGVGTYFGAQCEKHGLLVRVAGDNIMMSPPFIITPQ 420

Query: 1326 ELDELISKYGAALKATEERVKELKAQQ 1406
            E+DELISKYG ALKATEERVKELK+QQ
Sbjct: 421  EVDELISKYGKALKATEERVKELKSQQ 447


>ref|NP_001233777.1| gamma aminobutyrate transaminase 3, chloroplastic [Solanum
            lycopersicum] gi|75147511|sp|Q84P52.1|GATP3_SOLLC
            RecName: Full=Gamma aminobutyrate transaminase 3,
            chloroplastic; AltName: Full=Gamma-aminobutyrate
            transaminase isozyme 3; Short=LeGABA-TP3;
            Short=SlGABA-T3; Flags: Precursor
            gi|29837286|gb|AAO92257.1| gamma-aminobutyrate
            transaminase subunit precursor isozyme 3 [Solanum
            lycopersicum] gi|171854587|dbj|BAG16484.1| gamma
            aminobutyrate transaminase isoform3 [Solanum
            lycopersicum]
          Length = 520

 Score =  828 bits (2138), Expect = 0.0
 Identities = 397/471 (84%), Positives = 437/471 (92%), Gaps = 3/471 (0%)
 Frame = +3

Query: 6    TSSDASLQKDIND---EGYRGHDMLAPFTAGWQTTDSNPLVIAKSEGSYVYDTNGKKYLD 176
            +S++ SL+ DI+     GY+GHDMLAPFTAGW +TD  PLVI KSEGSYVYD NGKKYLD
Sbjct: 46   SSTETSLKNDISATDVRGYKGHDMLAPFTAGWHSTDLEPLVIQKSEGSYVYDVNGKKYLD 105

Query: 177  ALAGLWCTSLGGNEPRLVEAAVKQLSTLPFYHSFWNRTTKPSLDLAKELLEMFTANKMAK 356
            ALAGLWCTSLGGNEPRLV AA KQL+ L FYHSFWNR+TKPSLDLAKELL++FTANKMAK
Sbjct: 106  ALAGLWCTSLGGNEPRLVAAATKQLNELAFYHSFWNRSTKPSLDLAKELLDLFTANKMAK 165

Query: 357  VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKF 536
             FFTNSGSEANDTQVKLVWYYNNALGRP+KKKFIAR KSYHGSTLI+ASLSGLPALHQ+F
Sbjct: 166  AFFTNSGSEANDTQVKLVWYYNNALGRPDKKKFIARTKSYHGSTLISASLSGLPALHQQF 225

Query: 537  DLPAPFVLHTDCPHYWRHHLPGETEEEFSTRLANNLEELILKEGPDTVAAFIAEPVMGAG 716
            DLPAPFVLHTDCPH+WR H PGETEEEFSTRLANNLE LILKEGP+T+AAFIAEPVMGAG
Sbjct: 226  DLPAPFVLHTDCPHFWRFHQPGETEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAG 285

Query: 717  GVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSIAKALSS 896
            GVIPPPATYFEK+QA++KKYDILFIADEVIC FGRLGTMFGC+KYNIKPDLVS+AKALSS
Sbjct: 286  GVIPPPATYFEKVQAILKKYDILFIADEVICGFGRLGTMFGCEKYNIKPDLVSVAKALSS 345

Query: 897  GYMPIGAVFVSPEVSDVIYSQSNKLGTFSHGFTYSGHPVSCAVALETLKIYKERNIVDQV 1076
            GYMPIGAV VSPEVSDVIYSQSNKLGTFSHGFTYSGHPVSCAVALETLKIYKERNI++QV
Sbjct: 346  GYMPIGAVLVSPEVSDVIYSQSNKLGTFSHGFTYSGHPVSCAVALETLKIYKERNIIEQV 405

Query: 1077 KILSPKFQDGIKAYSNSPIIGEIRGTGLIIGTEFTDNKSPNDLFPPEWGVGAYFGAQCEK 1256
              +SPKFQ+G+KA+S+SPIIGEIRGTGL+ GTEFTDNKSPND FPPEWG+GAYFGA+CEK
Sbjct: 406  NRISPKFQEGLKAFSDSPIIGEIRGTGLLHGTEFTDNKSPNDPFPPEWGIGAYFGARCEK 465

Query: 1257 QGMLVRVAGDNIMMCPPFIITTEELDELISKYGAALKATEERVKELKAQQK 1409
             G+LVRVAGDNIMM PP+I++ EE+DELI KYG ALK TE RV+ELK+Q+K
Sbjct: 466  HGVLVRVAGDNIMMSPPYILSLEEIDELIIKYGKALKDTENRVEELKSQKK 516


>ref|XP_004147736.1| PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like
            [Cucumis sativus]
          Length = 507

 Score =  827 bits (2137), Expect = 0.0
 Identities = 395/466 (84%), Positives = 439/466 (94%)
 Frame = +3

Query: 9    SSDASLQKDINDEGYRGHDMLAPFTAGWQTTDSNPLVIAKSEGSYVYDTNGKKYLDALAG 188
            S+ AS QK+  D G++GHDMLAPFTAGWQTTD NPL+I +SEGSYVYD +G+KYLD+LAG
Sbjct: 44   STQASAQKE--DSGFKGHDMLAPFTAGWQTTDVNPLIIERSEGSYVYDIDGRKYLDSLAG 101

Query: 189  LWCTSLGGNEPRLVEAAVKQLSTLPFYHSFWNRTTKPSLDLAKELLEMFTANKMAKVFFT 368
            LWCTSLGGNE RLV AA+KQL+TLPFYHSFWNRTT+PSLDLAK+LLEMFTA KM KVFF 
Sbjct: 102  LWCTSLGGNESRLVAAAMKQLNTLPFYHSFWNRTTRPSLDLAKDLLEMFTARKMGKVFFV 161

Query: 369  NSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPA 548
            NSGSEANDTQVKLVWYYNNALGRP+KKKFIAR+KSYHGSTLI+ASL+GLPALHQKFD+PA
Sbjct: 162  NSGSEANDTQVKLVWYYNNALGRPDKKKFIARSKSYHGSTLISASLTGLPALHQKFDIPA 221

Query: 549  PFVLHTDCPHYWRHHLPGETEEEFSTRLANNLEELILKEGPDTVAAFIAEPVMGAGGVIP 728
            PFVLHTDCPHYWR HLPGETEEEFSTRLA NLE+LI+KEGP+T+AAFIAEPVMGAGGVIP
Sbjct: 222  PFVLHTDCPHYWRFHLPGETEEEFSTRLAKNLEDLIIKEGPETIAAFIAEPVMGAGGVIP 281

Query: 729  PPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSIAKALSSGYMP 908
            PPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS+AKALSSGYMP
Sbjct: 282  PPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSGYMP 341

Query: 909  IGAVFVSPEVSDVIYSQSNKLGTFSHGFTYSGHPVSCAVALETLKIYKERNIVDQVKILS 1088
            IGAV VSPE+SDVI+SQSNKLG+FSHGFTYSGHPV+CAVA+ETLKIYKERNIV++V  +S
Sbjct: 342  IGAVIVSPEISDVIHSQSNKLGSFSHGFTYSGHPVACAVAIETLKIYKERNIVEKVNSIS 401

Query: 1089 PKFQDGIKAYSNSPIIGEIRGTGLIIGTEFTDNKSPNDLFPPEWGVGAYFGAQCEKQGML 1268
             +FQDG+KA+S+SPI+GEIRGTGLI+GTEF DNKSPND FPPEWGVGAYFGA+C+K GML
Sbjct: 402  SRFQDGLKAFSDSPIVGEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGML 461

Query: 1269 VRVAGDNIMMCPPFIITTEELDELISKYGAALKATEERVKELKAQQ 1406
            VRV+GD IMM PPFII+ +E+DELIS YG ALKATEERVKELKAQ+
Sbjct: 462  VRVSGDTIMMSPPFIISPQEVDELISIYGKALKATEERVKELKAQR 507


>gb|AFS28621.1| gamma-aminobutyrate transaminase 2 [Malus x domestica]
          Length = 514

 Score =  824 bits (2129), Expect = 0.0
 Identities = 394/454 (86%), Positives = 428/454 (94%)
 Frame = +3

Query: 48   GYRGHDMLAPFTAGWQTTDSNPLVIAKSEGSYVYDTNGKKYLDALAGLWCTSLGGNEPRL 227
            G++GHDMLAPFT GWQ+TD +PL+I KSEGSY YD+NGKKYLDALAGLWCT+LGGNEPRL
Sbjct: 61   GFKGHDMLAPFTPGWQSTDLHPLIIEKSEGSYAYDSNGKKYLDALAGLWCTALGGNEPRL 120

Query: 228  VEAAVKQLSTLPFYHSFWNRTTKPSLDLAKELLEMFTANKMAKVFFTNSGSEANDTQVKL 407
            V AA KQL+TLPFYHSFWNRTT+PSLDLAKELLE FTA KMAK FFTNSGSEANDTQVKL
Sbjct: 121  VAAATKQLNTLPFYHSFWNRTTRPSLDLAKELLETFTATKMAKAFFTNSGSEANDTQVKL 180

Query: 408  VWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 587
            VWYYNNALGRP+KKKFIAR KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR
Sbjct: 181  VWYYNNALGRPDKKKFIARHKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 240

Query: 588  HHLPGETEEEFSTRLANNLEELILKEGPDTVAAFIAEPVMGAGGVIPPPATYFEKIQAVV 767
            HHLPGETEEEFSTRLANNLE LILKEGP+T+AAFIAEPVMGAGGVI PPATYFEK+QAVV
Sbjct: 241  HHLPGETEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVITPPATYFEKVQAVV 300

Query: 768  KKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSIAKALSSGYMPIGAVFVSPEVSDV 947
            KKYDILFIADEVICAFGRLG M+GCDKYNIKPDLVS+AKALSS YMPIGAV VSPEVSDV
Sbjct: 301  KKYDILFIADEVICAFGRLGYMYGCDKYNIKPDLVSVAKALSSAYMPIGAVLVSPEVSDV 360

Query: 948  IYSQSNKLGTFSHGFTYSGHPVSCAVALETLKIYKERNIVDQVKILSPKFQDGIKAYSNS 1127
            I+SQS+KLG+FSHGFTYSGHPV+CAVA+ETLKIYKERNIV+QV+ ++P+FQDG+KA+S+S
Sbjct: 361  IHSQSSKLGSFSHGFTYSGHPVACAVAIETLKIYKERNIVEQVRSIAPRFQDGVKAFSDS 420

Query: 1128 PIIGEIRGTGLIIGTEFTDNKSPNDLFPPEWGVGAYFGAQCEKQGMLVRVAGDNIMMCPP 1307
            PIIGEIRGTGLI+GTEFTDNKSPND FP EWGVGAYFGAQCEK GML+RVAGDNIMM PP
Sbjct: 421  PIIGEIRGTGLILGTEFTDNKSPNDPFPAEWGVGAYFGAQCEKHGMLIRVAGDNIMMSPP 480

Query: 1308 FIITTEELDELISKYGAALKATEERVKELKAQQK 1409
            FI+T  E+DELIS YG ALK TEE VKELK++QK
Sbjct: 481  FIMTPSEVDELISLYGKALKDTEEYVKELKSKQK 514


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