BLASTX nr result

ID: Bupleurum21_contig00007728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007728
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616997.1| Transmembrane protein [Medicago truncatula] ...    80   2e-13
dbj|BAF98597.1| CM0545.360.nc [Lotus japonicus]                        80   2e-13
gb|AAC17615.1| Similar to hypothetical protein HYP1 gb|Z97338 fr...    79   5e-13
ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|NP_172660.5| putative ERD4 protein [Arabidopsis thaliana] gi...    79   5e-13

>ref|XP_003616997.1| Transmembrane protein [Medicago truncatula]
           gi|355518332|gb|AES99955.1| Transmembrane protein
           [Medicago truncatula]
          Length = 766

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -1

Query: 224 MATLGDIGXXXXXXXXXXXXXXXXXXXXXIQPLNDRVYFPKWYLRRLRNSPSSGG-LVGK 48
           MA+LGDIG                     IQP+NDRVYFPKWY++ LR+SP  GG  V K
Sbjct: 1   MASLGDIGLAAAINILTAIVFLLAFAILRIQPINDRVYFPKWYMKGLRSSPLQGGAFVSK 60

Query: 47  FVNVDIKSYVRFLNW 3
           FVN+D +SY+RFLNW
Sbjct: 61  FVNIDFRSYIRFLNW 75


>dbj|BAF98597.1| CM0545.360.nc [Lotus japonicus]
          Length = 755

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -1

Query: 224 MATLGDIGXXXXXXXXXXXXXXXXXXXXXIQPLNDRVYFPKWYLRRLRNSPSSGG-LVGK 48
           MA+LGDIG                     IQP+NDRVYFPKWYL+ LR+SP  GG  V K
Sbjct: 1   MASLGDIGLAAAINILTAFAFLIAFAVLRIQPINDRVYFPKWYLKGLRSSPLQGGAFVSK 60

Query: 47  FVNVDIKSYVRFLNW 3
           FVN+D +SY+RFLNW
Sbjct: 61  FVNLDFRSYIRFLNW 75


>gb|AAC17615.1| Similar to hypothetical protein HYP1 gb|Z97338 from A. thaliana
           [Arabidopsis thaliana]
          Length = 783

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/75 (54%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -1

Query: 224 MATLGDIGXXXXXXXXXXXXXXXXXXXXXIQPLNDRVYFPKWYLRRLRNSP-SSGGLVGK 48
           MATLGDIG                     IQP NDRVYFPKWYL+ +R+SP  SG LV K
Sbjct: 1   MATLGDIGVAAAINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSK 60

Query: 47  FVNVDIKSYVRFLNW 3
           FVNV++ SY+RFLNW
Sbjct: 61  FVNVNLGSYLRFLNW 75


>ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -1

Query: 224 MATLGDIGXXXXXXXXXXXXXXXXXXXXXIQPLNDRVYFPKWYLRRLRNSP-SSGGLVGK 48
           MAT+ DIG                     IQP+NDRVYFPKWY++ LR+SP  +G  VGK
Sbjct: 1   MATISDIGVAAAINILTAFAFFIVFAILRIQPVNDRVYFPKWYIKGLRSSPLGTGAFVGK 60

Query: 47  FVNVDIKSYVRFLNW 3
           FVN+D +SYVRFLNW
Sbjct: 61  FVNLDFRSYVRFLNW 75


>ref|NP_172660.5| putative ERD4 protein [Arabidopsis thaliana]
           gi|204324149|gb|ACI01072.1| putative membrane protein
           [Arabidopsis thaliana] gi|332190700|gb|AEE28821.1|
           putative ERD4 protein [Arabidopsis thaliana]
          Length = 771

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/75 (54%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -1

Query: 224 MATLGDIGXXXXXXXXXXXXXXXXXXXXXIQPLNDRVYFPKWYLRRLRNSP-SSGGLVGK 48
           MATLGDIG                     IQP NDRVYFPKWYL+ +R+SP  SG LV K
Sbjct: 1   MATLGDIGVAAAINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSK 60

Query: 47  FVNVDIKSYVRFLNW 3
           FVNV++ SY+RFLNW
Sbjct: 61  FVNVNLGSYLRFLNW 75


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