BLASTX nr result

ID: Bupleurum21_contig00007706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007706
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172078.2| uncharacterized protein [Arabidopsis thaliana] ...   135   4e-30
ref|NP_850169.1| uncharacterized protein [Arabidopsis thaliana] ...   133   1e-29
ref|XP_002327959.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002892311.1| hypothetical protein ARALYDRAFT_470598 [Arab...   131   5e-29
ref|XP_002529747.1| conserved hypothetical protein [Ricinus comm...   131   5e-29

>ref|NP_172078.2| uncharacterized protein [Arabidopsis thaliana]
           gi|42571351|ref|NP_973766.1| uncharacterized protein
           [Arabidopsis thaliana] gi|334182323|ref|NP_001184917.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|334182325|ref|NP_001184918.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|6850316|gb|AAF29393.1|AC009999_13 Contains similarity
           to an unknown protein from Arabidopsis thaliana
           gb|AC002335.2. ESTs gb|AI997584, gb|AA712406 come from
           this gene [Arabidopsis thaliana]
           gi|107738111|gb|ABF83638.1| At1g05870 [Arabidopsis
           thaliana] gi|332189785|gb|AEE27906.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332189786|gb|AEE27907.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332189787|gb|AEE27908.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332189788|gb|AEE27909.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 189

 Score =  135 bits (339), Expect = 4e-30
 Identities = 82/161 (50%), Positives = 96/161 (59%), Gaps = 7/161 (4%)
 Frame = -3

Query: 462 SSDSYQCPVLDFESNEEENYSCPQAEMND-----CLVDNRGVLKKKKNQVFLHGYVETXX 298
           SSD +Q     FES +E   +    E++          +R  L++KK+QV L GYVET  
Sbjct: 8   SSDPWQTSANAFESVDESGINEAWVEISSRRSFVAGEGSRKKLERKKSQVLLEGYVETAS 67

Query: 297 XXXXXXXXXXXDQKLGRSKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSL 118
                         L RSKSLTDDDLE+L+GCLDLGFGFSYDEIPELCNTLPALELCYS+
Sbjct: 68  SSSVDDQK----DDLTRSKSLTDDDLEDLRGCLDLGFGFSYDEIPELCNTLPALELCYSM 123

Query: 117 SQKFLDDQQQH--KXXXXXXXXXXXXXXXXPIANWKISSPG 1
           SQKFLDD+Q    +                PIANWKISSPG
Sbjct: 124 SQKFLDDKQNKSPETSSVEDCPSPPLVTATPIANWKISSPG 164


>ref|NP_850169.1| uncharacterized protein [Arabidopsis thaliana]
           gi|42571003|ref|NP_973575.1| uncharacterized protein
           [Arabidopsis thaliana] gi|17528942|gb|AAL38681.1|
           unknown protein [Arabidopsis thaliana]
           gi|50897252|gb|AAT85765.1| At2g31560 [Arabidopsis
           thaliana] gi|222423288|dbj|BAH19620.1| AT2G31560
           [Arabidopsis thaliana] gi|222423386|dbj|BAH19665.1|
           AT2G31560 [Arabidopsis thaliana]
           gi|330253466|gb|AEC08560.1| uncharacterized protein
           [Arabidopsis thaliana] gi|330253467|gb|AEC08561.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 202

 Score =  133 bits (335), Expect = 1e-29
 Identities = 74/123 (60%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
 Frame = -3

Query: 366 DNRGVLKKKKNQVFLHGYVETXXXXXXXXXXXXXDQKLGRSKSLTDDDLEELKGCLDLGF 187
           ++R  L+KKK+QV L GY                   L R+KSLTDDDLEELKGCLDLGF
Sbjct: 67  ESRKKLEKKKSQVLLEGYA------------LDDQDDLTRAKSLTDDDLEELKGCLDLGF 114

Query: 186 GFSYDEIPELCNTLPALELCYSLSQKFLDDQQQ-HKXXXXXXXXXXXXXXXXPIANWKIS 10
           GFSYDEIPELCNTLPALELCYS+SQKFLDD+QQ H                 PIANWKIS
Sbjct: 115 GFSYDEIPELCNTLPALELCYSMSQKFLDDKQQNHHKSQEEDDSSPPPTTTAPIANWKIS 174

Query: 9   SPG 1
           SPG
Sbjct: 175 SPG 177


>ref|XP_002327959.1| predicted protein [Populus trichocarpa] gi|222837368|gb|EEE75747.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  132 bits (332), Expect = 3e-29
 Identities = 73/124 (58%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
 Frame = -3

Query: 363 NRGVLKK---KKNQVFLHGYVETXXXXXXXXXXXXXDQKLGRSKSLTDDDLEELKGCLDL 193
           N+G L+K   KK+QV L GYVE              + +L R+KSLTDDDL+ELKGCLDL
Sbjct: 12  NKGSLRKILRKKSQVLLEGYVE---------GRSNSEDELKRTKSLTDDDLDELKGCLDL 62

Query: 192 GFGFSYDEIPELCNTLPALELCYSLSQKFLDDQQQHKXXXXXXXXXXXXXXXXPIANWKI 13
           GFGFSYDEIPELCNTLPALELCYS+SQKFLD+ Q+                  PIANWKI
Sbjct: 63  GFGFSYDEIPELCNTLPALELCYSMSQKFLDEHQKPPESSSPAEAEAEAASSSPIANWKI 122

Query: 12  SSPG 1
           SSPG
Sbjct: 123 SSPG 126


>ref|XP_002892311.1| hypothetical protein ARALYDRAFT_470598 [Arabidopsis lyrata subsp.
           lyrata] gi|297338153|gb|EFH68570.1| hypothetical protein
           ARALYDRAFT_470598 [Arabidopsis lyrata subsp. lyrata]
          Length = 187

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/122 (59%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
 Frame = -3

Query: 363 NRGVLKKKKNQVFLHGYVETXXXXXXXXXXXXXDQKLGRSKSLTDDDLEELKGCLDLGFG 184
           +R  L++KK+QV L GYVET                L RSKSLTDDDLE+LKGCLDLGFG
Sbjct: 48  SRKKLERKKSQVLLEGYVETAAVDDQK-------DDLTRSKSLTDDDLEDLKGCLDLGFG 100

Query: 183 FSYDEIPELCNTLPALELCYSLSQKFLDDQQQH-KXXXXXXXXXXXXXXXXPIANWKISS 7
           FSYDEIPELCNTLPALELCYS+SQKFLDD+ +  +                PIANWKISS
Sbjct: 101 FSYDEIPELCNTLPALELCYSMSQKFLDDKHKSPESSSVEDSPSPSPVTSTPIANWKISS 160

Query: 6   PG 1
           PG
Sbjct: 161 PG 162


>ref|XP_002529747.1| conserved hypothetical protein [Ricinus communis]
           gi|223530745|gb|EEF32613.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  131 bits (330), Expect = 5e-29
 Identities = 75/122 (61%), Positives = 81/122 (66%)
 Frame = -3

Query: 366 DNRGVLKKKKNQVFLHGYVETXXXXXXXXXXXXXDQKLGRSKSLTDDDLEELKGCLDLGF 187
           ++R   KKKKNQV L GYVE                 L R+KSLTDDDL+ELKGCLDLGF
Sbjct: 69  NSRSNSKKKKNQVLLEGYVEVASNNEE--------DDLKRTKSLTDDDLDELKGCLDLGF 120

Query: 186 GFSYDEIPELCNTLPALELCYSLSQKFLDDQQQHKXXXXXXXXXXXXXXXXPIANWKISS 7
           GFSYDEIPELCNTLPALELCYS+SQKFLD  +QHK                PIANWKISS
Sbjct: 121 GFSYDEIPELCNTLPALELCYSMSQKFLD--EQHK---SPERSTSPEPASSPIANWKISS 175

Query: 6   PG 1
           PG
Sbjct: 176 PG 177


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