BLASTX nr result

ID: Bupleurum21_contig00007655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007655
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541316.1| PREDICTED: RRP12-like protein-like [Glycine ...   105   3e-21
ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like p...   101   5e-20
ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis ...   101   5e-20
ref|XP_003590720.1| RRP12-like protein [Medicago truncatula] gi|...    94   9e-18
ref|XP_003590714.1| RRP12-like protein [Medicago truncatula] gi|...    92   6e-17

>ref|XP_003541316.1| PREDICTED: RRP12-like protein-like [Glycine max]
          Length = 1274

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = -3

Query: 305 MEVSQMSESPISLDDS-DDFCTSILSRYSNSADEHHHHLCAVIGAMSQALKDQNQPLSPL 129
           ME  +M E+   +D+S DD C+SILSR++NS DE HHHLCAV+GAMSQ LKD NQP +P 
Sbjct: 1   MEGIEMEEAAFGIDESNDDLCSSILSRFANSTDETHHHLCAVVGAMSQELKDNNQPSTPF 60

Query: 128 AYFGAASSSLDRISGESEPSGHTIDA 51
           AYF AA  SLD+ + E  P  H IDA
Sbjct: 61  AYFCAARVSLDKFTSEPNPPSHVIDA 86


>ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like protein-like [Cucumis
           sativus]
          Length = 1265

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -3

Query: 284 ESPISLDDSDDFCTSILSRYSNSADEHHHHLCAVIGAMSQALKDQNQPLSPLAYFGAASS 105
           E+    + +DDFC SIL R+S+S +E H HLCAVIGAM+Q L+DQ+ P +PLAYFGA  S
Sbjct: 9   EASFDFESNDDFCNSILFRFSDSTNEEHQHLCAVIGAMAQELRDQSLPSTPLAYFGATCS 68

Query: 104 SLDRISGESEPSGHTIDA 51
           SLDRIS E EPS H ++A
Sbjct: 69  SLDRISSEPEPSPHLLEA 86


>ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis sativus]
          Length = 1264

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -3

Query: 284 ESPISLDDSDDFCTSILSRYSNSADEHHHHLCAVIGAMSQALKDQNQPLSPLAYFGAASS 105
           E+    + +DDFC SIL R+S+S +E H HLCAVIGAM+Q L+DQ+ P +PLAYFGA  S
Sbjct: 9   EASFDFESNDDFCNSILFRFSDSTNEEHQHLCAVIGAMAQELRDQSLPSTPLAYFGATCS 68

Query: 104 SLDRISGESEPSGHTIDA 51
           SLDRIS E EPS H ++A
Sbjct: 69  SLDRISSEPEPSPHLLEA 86


>ref|XP_003590720.1| RRP12-like protein [Medicago truncatula]
           gi|355479768|gb|AES60971.1| RRP12-like protein [Medicago
           truncatula]
          Length = 589

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/85 (56%), Positives = 57/85 (67%)
 Frame = -3

Query: 305 MEVSQMSESPISLDDSDDFCTSILSRYSNSADEHHHHLCAVIGAMSQALKDQNQPLSPLA 126
           ME  +M ES  + + +DD C SILSR+SNS   +H HLCAVIGAMSQ LKD N   SP+A
Sbjct: 1   MEGIEMEESTFNNESNDDICNSILSRFSNSTAVNHQHLCAVIGAMSQELKDHNLSSSPVA 60

Query: 125 YFGAASSSLDRISGESEPSGHTIDA 51
           YF A  SSLDR + E  P  H +DA
Sbjct: 61  YFCATCSSLDRTASEPNPPIHLMDA 85


>ref|XP_003590714.1| RRP12-like protein [Medicago truncatula]
           gi|355479762|gb|AES60965.1| RRP12-like protein [Medicago
           truncatula]
          Length = 1328

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = -3

Query: 305 MEVSQMSESPISLDDSDDFCTSILSRYSNSADEHHHHLCAVIGAMSQALKDQNQPLSPLA 126
           ME  +M +   + + +DD C SILSR+S S    H HLC VIGAMSQ LKD N P +P+A
Sbjct: 1   MEGIEMEQPTFNNESNDDICNSILSRFSKSTAVSHQHLCTVIGAMSQELKDHNLPSTPVA 60

Query: 125 YFGAASSSLDRISGESEPSGHTIDA 51
           YFGA  SSL+RI  E  P  H ID+
Sbjct: 61  YFGATCSSLNRIVPEPNPPDHVIDS 85


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