BLASTX nr result
ID: Bupleurum21_contig00007642
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00007642
(1666 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ... 421 e-115
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 421 e-115
ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea ma... 391 e-106
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 389 e-106
ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [S... 389 e-105
>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
vinifera]
Length = 529
Score = 421 bits (1082), Expect = e-115
Identities = 232/469 (49%), Positives = 304/469 (64%), Gaps = 5/469 (1%)
Frame = +2
Query: 44 LWCTNCAKSVSPEPLDDGRLCCSFCGKVLVEDNYSEEVTFVKGAGGQSRAQGT-LNSLAS 220
+WCTNCA+ E L +G LCC+ CGKV+ +DN+S + FVK A GQS+ G + ++ S
Sbjct: 2 VWCTNCARDCRTERLLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSGNFVKTVQS 61
Query: 221 GISASRDRTLGVAAEDMEWMLSSVFSDDDASILRRAQNFYRIALERNFTKGRPKQLVEAA 400
SASR+RTL A ++ + +++ SI+R A FY IALERNFT+GR K+ V AA
Sbjct: 62 DYSASRERTLNDAYAEIGHIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAAA 121
Query: 401 CLYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYLMLVQKLSLQDVPAIQKAVDPSLF 580
CLY+ACR ++ KP+LLI+F+E L NVY LGAV+L L + LSL++ P +QK VDPSLF
Sbjct: 122 CLYIACRENK---KPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLF 178
Query: 581 IHRFANRLLGKTDNDVETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYSYTKS 760
IHRFA L G+T+ V TAL+IIASMKRDW+QTGRKPSGLCGAALYISA+S+G +K+
Sbjct: 179 IHRFAAGLPGETNMGVSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKT 238
Query: 761 HIVKVVHICEATLTKRLIEFENTESGSLTIDEFTQKAEKLDEELRSLGRSASGMKSSDGS 940
IVK+VHICEATLTKRLIEFENTESGSLTI+EF KAE+L++E S +S G
Sbjct: 239 DIVKIVHICEATLTKRLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKG 298
Query: 941 EVFCKHK--DEAAFAHGLCRECYAEFMTFSGGLDGEAEPPAFQRAQQERMEKEYAGKNAA 1114
E+ C+HK + FAHGLC CY EF+ SGGL+G +EPPAFQRA+++RM K A +NA
Sbjct: 299 ELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENA- 357
Query: 1115 DSSCDTIAHQKQNSNFTNNGKRSEISE-ASRDQAQFTENNSTEGSTKHKYIDDSTYSNLH 1291
+SN K S + + ++ E S S K ID+ S+LH
Sbjct: 358 ------------DSNQIQLDKGSSSPDVCGNESSKLAEPKSIGASDKQASIDEGAPSDLH 405
Query: 1292 GSDDMSGKP-XXXXXXXXXXXXXXXXYIHTAEETQYKTIIWEELNREYI 1435
G+DD + Y+H +E Q+K IIWE +N+EY+
Sbjct: 406 GADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYL 454
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 421 bits (1082), Expect = e-115
Identities = 232/469 (49%), Positives = 304/469 (64%), Gaps = 5/469 (1%)
Frame = +2
Query: 44 LWCTNCAKSVSPEPLDDGRLCCSFCGKVLVEDNYSEEVTFVKGAGGQSRAQGT-LNSLAS 220
+WCTNCA+ E L +G LCC+ CGKV+ +DN+S + FVK A GQS+ G + ++ S
Sbjct: 2 VWCTNCARDCRTERLLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSGNFVKTVQS 61
Query: 221 GISASRDRTLGVAAEDMEWMLSSVFSDDDASILRRAQNFYRIALERNFTKGRPKQLVEAA 400
SASR+RTL A ++ + +++ SI+R A FY IALERNFT+GR K+ V AA
Sbjct: 62 DYSASRERTLNDAYAEIGHIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAAA 121
Query: 401 CLYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYLMLVQKLSLQDVPAIQKAVDPSLF 580
CLY+ACR ++ KP+LLI+F+E L NVY LGAV+L L + LSL++ P +QK VDPSLF
Sbjct: 122 CLYIACRENK---KPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLF 178
Query: 581 IHRFANRLLGKTDNDVETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYSYTKS 760
IHRFA L G+T+ V TAL+IIASMKRDW+QTGRKPSGLCGAALYISA+S+G +K+
Sbjct: 179 IHRFAAGLPGETNMGVSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKT 238
Query: 761 HIVKVVHICEATLTKRLIEFENTESGSLTIDEFTQKAEKLDEELRSLGRSASGMKSSDGS 940
IVK+VHICEATLTKRLIEFENTESGSLTI+EF KAE+L++E S +S G
Sbjct: 239 DIVKIVHICEATLTKRLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKG 298
Query: 941 EVFCKHK--DEAAFAHGLCRECYAEFMTFSGGLDGEAEPPAFQRAQQERMEKEYAGKNAA 1114
E+ C+HK + FAHGLC CY EF+ SGGL+G +EPPAFQRA+++RM K A +NA
Sbjct: 299 ELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENA- 357
Query: 1115 DSSCDTIAHQKQNSNFTNNGKRSEISE-ASRDQAQFTENNSTEGSTKHKYIDDSTYSNLH 1291
+SN K S + + ++ E S S K ID+ S+LH
Sbjct: 358 ------------DSNQIQLDKGSSSPDVCGNESSKLAEPKSIGASDKQASIDEGAPSDLH 405
Query: 1292 GSDDMSGKP-XXXXXXXXXXXXXXXXYIHTAEETQYKTIIWEELNREYI 1435
G+DD + Y+H +E Q+K IIWE +N+EY+
Sbjct: 406 GADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYL 454
>ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea mays]
gi|194706710|gb|ACF87439.1| unknown [Zea mays]
gi|413946300|gb|AFW78949.1| hypothetical protein
ZEAMMB73_136276 [Zea mays]
Length = 580
Score = 391 bits (1005), Expect = e-106
Identities = 219/468 (46%), Positives = 298/468 (63%), Gaps = 4/468 (0%)
Frame = +2
Query: 44 LWCTNCAKSV-SPEPLDDGRLCCSFCGKVLVEDNYSEEVTFVKGAGGQSRAQGT-LNSLA 217
++CT+CA S + D G +CC CGKVL ++ Y++E TFVK GQSR G+ L S+
Sbjct: 2 VYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNKGQSRLAGSILESIE 61
Query: 218 SGISASRDRTLGVAAEDMEWMLSSVFSDDDASILRRAQNFYRIALERNFTKGRPKQLVEA 397
SG S SR RTL +++ +++++ +I+ +A FY +AL+RNFT+GR V A
Sbjct: 62 SGYSMSRQRTLDKGRDEIRQIVNNLHISGGETIVSKAFRFYELALDRNFTRGRRTTHVAA 121
Query: 398 ACLYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYLMLVQKLSLQDVPAIQKAVDPSL 577
ACLY+ACR S+ K YLLI+F++ L +VY LGAV+L L Q L L + P +QK VDPSL
Sbjct: 122 ACLYIACRQSK---KAYLLIDFSDHLQISVYVLGAVFLQLCQVLQLAEHPVVQKLVDPSL 178
Query: 578 FIHRFANRLLGKTDNDVETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYSYTK 757
FIHRF LLG+ +NDV TAL+I+ASMKRDWMQTGRKPSGLCGAALYI+A+SHG +YTK
Sbjct: 179 FIHRFTKLLLGRRNNDVSDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALSHGCNYTK 238
Query: 758 SHIVKVVHICEATLTKRLIEFENTESGSLTIDEFTQKAEKLDEELRSLGRSASGMKSSDG 937
+ IV VVH+CEATLTKRLIEFENT+SGSLTI+EF A++ +EE S SG
Sbjct: 239 ADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFLATADESNEEPVSKHSPKSG------ 292
Query: 938 SEVFCKHKDEA--AFAHGLCRECYAEFMTFSGGLDGEAEPPAFQRAQQERMEKEYAGKNA 1111
E+ CKHKD+ FAHGLC +CY +F SGGL+G ++PPAFQRA+++R+E A K A
Sbjct: 293 -EILCKHKDKGFEHFAHGLCEKCYNKFTKLSGGLEGGSDPPAFQRAEKKRLE---AAKRA 348
Query: 1112 ADSSCDTIAHQKQNSNFTNNGKRSEISEASRDQAQFTENNSTEGSTKHKYIDDSTYSNLH 1291
+++ A +++ T N SE+ A + + + S++ ++ D +
Sbjct: 349 EEAAAAKEAALEESLCDTQN---SEVESAMTPRKGLSGDKSSKMGSEGLINDSMPPKDPE 405
Query: 1292 GSDDMSGKPXXXXXXXXXXXXXXXXYIHTAEETQYKTIIWEELNREYI 1435
+ Y+H EETQYK IIWEE+N+EY+
Sbjct: 406 EGGENCEGNADPESLSDIDDAEVDGYLHNEEETQYKKIIWEEMNKEYL 453
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 389 bits (1000), Expect = e-106
Identities = 235/555 (42%), Positives = 307/555 (55%), Gaps = 43/555 (7%)
Frame = +2
Query: 44 LWCTNCAKSVSPEPLDDGRLCCSFCGKVLVEDNYSEEVTFVKGAGGQSRAQGT-LNSLAS 220
+WC+NC K+V+ + G L C CGKVL N+S+E TF K +GGQS+ G + S+ S
Sbjct: 2 VWCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQS 61
Query: 221 GISASRDRTLGVAAEDMEWMLSSVFSDDDASILRRAQNFYRIALERNFTKGRPKQLVEAA 400
SASR+RTL A EDM +M + + + I+R A FYRIALERNFT+GR + V+AA
Sbjct: 62 NYSASRERTLNKAFEDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNAEFVQAA 121
Query: 401 CLYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYLMLVQKLSLQDVPAIQKAVDPSLF 580
CLY+ACR KPYLLI+F+ +L NVY LGAV+L L + L L++ P +QK VDPSLF
Sbjct: 122 CLYIACREKN---KPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLF 178
Query: 581 IHRFANRLLGKTDND-----VETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGY 745
I +F LLG T +D V TALKII SMKRDWMQTGRKPSGLCGAALYISA+S+G
Sbjct: 179 IDKFTQCLLGGTKDDGMKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGV 238
Query: 746 SYTKSHIVKVVHICEATLTKRLIEFENTESGSLT-------------------------- 847
TKS I+K+VHIC+ATLTKRLIEFENTESGSLT
Sbjct: 239 KCTKSDIIKIVHICDATLTKRLIEFENTESGSLTNTCLLILVQALQHIDLLEYLPSGHAD 298
Query: 848 ------IDEFTQKAEKLDEELRSLGRSASGMKSSDGSEVFCKHKDEA--AFAHGLCRECY 1003
++EF A+KL ++ + EV C HK+E +A GLCR CY
Sbjct: 299 ISEKMNMEEFIVMADKLKGSNSYTNNGSNAL----SDEVLCVHKNECQKPYALGLCRSCY 354
Query: 1004 AEFMTFSGGLDGEAEPPAFQRAQQERMEKEYAGKNAADSSCDTIAHQKQNSNFTNNGKR- 1180
+F+ SGGLDG + PPAFQ A++ERMEK + + D C I Q NN ++
Sbjct: 355 DDFVELSGGLDGGSNPPAFQSAEKERMEKATVEEGSDD--CSAIGKFSQGLKPCNNTEKE 412
Query: 1181 -SEISEASRDQAQFTENNSTEGSTKHKYIDDSTYSNLHGSDDM-SGKPXXXXXXXXXXXX 1354
+ + + A F E + + + + DD N G+DD+ +
Sbjct: 413 SDNVHVDASETASFKEAEAKGTADEQRGPDDDV--NKVGADDLGTCASDDSENWSDIDDV 470
Query: 1355 XXXXYIHTAEETQYKTIIWEELNREYIXXXXXXXXXXXXXXXXXXXNLRNCPEDMEDXXX 1534
Y+H EE YK IIWEE+NREY+ N +NC ED++
Sbjct: 471 EVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKD 530
Query: 1535 XXXXXXXXMEQSKKE 1579
+ +S+KE
Sbjct: 531 LAEAAAAAVAKSRKE 545
>ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [Sorghum bicolor]
gi|241945449|gb|EES18594.1| hypothetical protein
SORBIDRAFT_09g027090 [Sorghum bicolor]
Length = 579
Score = 389 bits (999), Expect = e-105
Identities = 222/471 (47%), Positives = 298/471 (63%), Gaps = 7/471 (1%)
Frame = +2
Query: 44 LWCTNCAKSV-SPEPLDDGRLCCSFCGKVLVEDNYSEEVTFVKGAGGQSRAQGT-LNSLA 217
++CT+CA S + D G +CC CGKVL ++ Y+EE TFVKG G+SR G+ L S+
Sbjct: 2 VYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTEEPTFVKGNTGESRLAGSILASIE 61
Query: 218 SGISASRDRTLGVAAEDMEWMLSSVFSDDDASILRRAQNFYRIALERNFTKGRPKQLVEA 397
SG S S RTL +++ +++++ +I+ +A FY +A++RNFT+GR V A
Sbjct: 62 SGYSISHQRTLDKGKDEIRQIVNNLNVSGGETIVSKAYRFYELAVDRNFTRGRRTTHVAA 121
Query: 398 ACLYVACRTSEPDPKPYLLIEFAEFLGRNVYELGAVYLMLVQKLSLQDVPAIQKAVDPSL 577
ACLY+ACR ++ K YLLI+F+++L +VY LGAV+L L Q L L D P +QK VDPSL
Sbjct: 122 ACLYIACRQTK---KAYLLIDFSDYLQISVYVLGAVFLQLCQVLLLADHPVVQKLVDPSL 178
Query: 578 FIHRFANRLLGKTDNDVETTALKIIASMKRDWMQTGRKPSGLCGAALYISAISHGYSYTK 757
FIHRF +RLLGK DN V TAL+I+ASMKRDWMQTGRKPSGLCGAALYI+A+SHG +YTK
Sbjct: 179 FIHRFTHRLLGKRDNAVSDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALSHGKNYTK 238
Query: 758 SHIVKVVHICEATLTKRLIEFENTESGSLTIDEFTQKAEKLDEELRSLGRSASGMKSSDG 937
+ IV VVH+CEATLTKRLIEFENT+SGSLTI+EF A++ +EE SG
Sbjct: 239 ADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFLATADEYNEEPVPKHSPKSG------ 292
Query: 938 SEVFCKHKDEAA---FAHGLCRECYAEFMTFSGGLDGEAEPPAFQRAQQERMEKEYAGKN 1108
E+ CKHK++ FAHGLC +CY +F SGGL+G A+PPAFQRA+++R+E A K
Sbjct: 293 -EILCKHKNKKGFEHFAHGLCEKCYNKFTKLSGGLEGGADPPAFQRAEKKRLE---AAKR 348
Query: 1109 AADSSCDTIAHQKQNSNFTNNGKRSEISEASRDQAQFTENNSTEGSTKHKYIDDST--YS 1282
A +++ T+ + N S + + +ST GS + I+DS
Sbjct: 349 AEEAA--TVKEAALEESLCNTQNSEVESTITPRKGLSGHKSSTVGS--GELINDSVPPKD 404
Query: 1283 NLHGSDDMSGKPXXXXXXXXXXXXXXXXYIHTAEETQYKTIIWEELNREYI 1435
G ++ G Y+H EE QYK IIWEE+N+EY+
Sbjct: 405 PEEGGENCEGN-ADSESLSDIDDAEVDWYLHNEEEKQYKKIIWEEMNKEYL 454