BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007628
         (1615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ...   411   e-112
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...   397   e-108
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-102

>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498545|gb|AES79748.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  411 bits (1057), Expect = e-112
 Identities = 207/404 (51%), Positives = 291/404 (72%), Gaps = 5/404 (1%)
 Frame = -3

Query: 1556 LLYSLINSFAIYECTPTPDAYHFVIKSL--IKTRQFHQLHPLLDRLENHEIFETPEIIFI 1383
            LL +LI+SF  Y   P+P AY F+IK++  I T   H++  +L+ LE++E FETPE IF+
Sbjct: 57   LLSTLIHSFKAYHTDPSPKAYFFLIKTITNINTSHLHEIPHILNHLEHNEKFETPEFIFM 116

Query: 1382 DLIQAYGNSNRFQEAIHLFFKIPNFRCNPSVDALNTLLSVLCNTPTKMECLKMVPQIVFK 1203
             LI+ YG ++R Q+A+ LFF+IP FRC P+V +LN LLS+LC    K ECL+MVP I+ K
Sbjct: 117  YLIRFYGFNDRVQDAVDLFFRIPRFRCTPTVCSLNLLLSLLCG---KRECLRMVPDILLK 173

Query: 1202 SQ---IRLEESSYYILIKALCTINKANHAFGLLHYMIDDGFEIDERICSLIISTLCKQGD 1032
            S+   IRLEESS+++LIKALC I + ++A  +++ M++DG+ +D++ICSLIIS+LC+Q D
Sbjct: 174  SRDMKIRLEESSFWVLIKALCRIKRVDYAIKMMNCMVEDGYCLDDKICSLIISSLCEQND 233

Query: 1031 LTVVEFMSYFREMKTFGFCPGRLDWCNLIRFLVKNGKGIDALNILNQMKVDGIKPDVICY 852
            LT VE +  +  M+  GFCPG +D  N+IRFLVK GKG+DAL ILNQ+K DGIKPD++CY
Sbjct: 234  LTSVEALVVWGNMRKLGFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCY 293

Query: 851  TMVLDGVISEGAYSKADELFDEMLILGVVPDICTYNVYICGLFKQKNIYAGLDLLACIED 672
            T+VL G++ EG Y K DELFDE+L+LG+VPD+ TYNVYI GL KQ N    L ++  +E 
Sbjct: 294  TIVLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEK 353

Query: 671  VGCKPDVVTYNGILKALCDSGELSQAKSIVNLMRSKGVEQNFKTYEILIGVMVHQGDISE 492
            +GCKP+VVTYN +L ALC SG+L +AK ++  MR KGVE N  TY I++  +V +G+I E
Sbjct: 354  LGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGE 413

Query: 491  ACNLLEQMVGKGLVQQAISFFKLLPDFDQTGSVSRVLDVLRDII 360
            AC LLE+M+ K    ++ +F  ++    Q G +S  L ++  I+
Sbjct: 414  ACVLLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNKIV 457


>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  397 bits (1021), Expect = e-108
 Identities = 202/406 (49%), Positives = 283/406 (69%), Gaps = 3/406 (0%)
 Frame = -3

Query: 1568 TNTHLLYSLINSFAIYECTPTPDAYHFVIKSLIKTRQFHQLHPLLDRLENHEIFETPEII 1389
            +N+  L  LI+SF IY   PTP+AY FVI +L + RQFH L PLL RLE  E FETPE I
Sbjct: 56   SNSQFLSILIDSFRIYNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFI 115

Query: 1388 FIDLIQAYGNSNRFQEAIHLFFKIPNFRCNPSVDALNTLLSVLCNTPTKMECLKMVPQIV 1209
            F +LI+ YGN+N F++A+ LFF+IPNFRC PSV +LN LL VLC    + E L MVPQI+
Sbjct: 116  FTNLIKVYGNANMFEDAVDLFFRIPNFRCVPSVYSLNALLYVLCK---RREGLVMVPQIL 172

Query: 1208 FKSQ---IRLEESSYYILIKALCTINKANHAFGLLHYMIDDGFEIDERICSLIISTLCKQ 1038
             KSQ   IRLEESS+ IL+ ALC I K N+A  +L+YM++DG+ +D ++CS+I+S+LC+Q
Sbjct: 173  LKSQAMNIRLEESSFRILVAALCRIKKHNYAIRILNYMLNDGYAVDAKMCSIILSSLCEQ 232

Query: 1037 GDLTVVEFMSYFREMKTFGFCPGRLDWCNLIRFLVKNGKGIDALNILNQMKVDGIKPDVI 858
              L+  E + +  EM+  GF PGR+D  N+IRFLVK G  +DAL + +QMK DGIKPD +
Sbjct: 233  KGLSGDEVLRFMEEMRKLGFYPGRVDCNNVIRFLVKEGMVMDALGVFDQMKTDGIKPDTV 292

Query: 857  CYTMVLDGVISEGAYSKADELFDEMLILGVVPDICTYNVYICGLFKQKNIYAGLDLLACI 678
             YTM+L+GV ++G Y KAD+LFDEML+LGVVPDI  YNVYI  L KQ NI  G+ +LA +
Sbjct: 293  SYTMILNGVTADGDYEKADDLFDEMLVLGVVPDIHAYNVYINSLCKQNNIEEGVRMLASM 352

Query: 677  EDVGCKPDVVTYNGILKALCDSGELSQAKSIVNLMRSKGVEQNFKTYEILIGVMVHQGDI 498
             ++GCKPD VTYN +L+ +    +L   + +   M  +GV+ N++TY I++  +V +G+I
Sbjct: 353  RELGCKPDYVTYNMLLEGMSKVRDLGGMRELAREMELEGVQWNWETYRIMLDGLVGKGEI 412

Query: 497  SEACNLLEQMVGKGLVQQAISFFKLLPDFDQTGSVSRVLDVLRDII 360
             E+C+LLE+M+ K       +F +++ +  Q G V + L ++  ++
Sbjct: 413  DESCSLLEEMLDKYFSCWCSTFDEIICELCQRGLVCKALQLVNKMV 458


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Glycine max]
          Length = 499

 Score =  390 bits (1001), Expect = e-106
 Identities = 193/402 (48%), Positives = 284/402 (70%), Gaps = 3/402 (0%)
 Frame = -3

Query: 1556 LLYSLINSFAIYECTPTPDAYHFVIKSLIKTRQFHQLHPLLDRLENHEIFETPEIIFIDL 1377
            LL +L++SF  Y   PTP AY FV+K+L  T Q   + P+L  LE+ E FETPE I + L
Sbjct: 65   LLSTLLDSFKAYSIDPTPKAYFFVLKTLTSTSQLQDIPPVLYHLEHLEKFETPESILVYL 124

Query: 1376 IQAYGNSNRFQEAIHLFFKIPNFRCNPSVDALNTLLSVLCNTPTKMECLKMVPQIVFKSQ 1197
            I+ YG S+R Q+A+ LFF+IP FRC P+V +LN +LS+LC    K +CL+MVP+I+ KSQ
Sbjct: 125  IRFYGLSDRVQDAVDLFFRIPRFRCTPTVCSLNLVLSLLCR---KRDCLEMVPEILLKSQ 181

Query: 1196 ---IRLEESSYYILIKALCTINKANHAFGLLHYMIDDGFEIDERICSLIISTLCKQGDLT 1026
               IR+EES++ +LI+ALC I +  +A  +L++M++DG+ +DE+ICSL+IS LC+Q DLT
Sbjct: 182  HMNIRVEESTFRVLIRALCRIKRVGYAIKMLNFMVEDGYGLDEKICSLVISALCEQKDLT 241

Query: 1025 VVEFMSYFREMKTFGFCPGRLDWCNLIRFLVKNGKGIDALNILNQMKVDGIKPDVICYTM 846
              E +  +R+M+  GFCPG +D+ N+IRFLVK G+G+DAL+ILNQ K DGIK DV+ YTM
Sbjct: 242  SAEALVVWRDMRKLGFCPGVMDYTNMIRFLVKEGRGMDALDILNQQKQDGIKLDVVSYTM 301

Query: 845  VLDGVISEGAYSKADELFDEMLILGVVPDICTYNVYICGLFKQKNIYAGLDLLACIEDVG 666
            VL G+++EG Y   DELFDEML++G++PD  TYNVYI GL KQ N+   L ++A +E++G
Sbjct: 302  VLSGIVAEGEYVMLDELFDEMLVIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEELG 361

Query: 665  CKPDVVTYNGILKALCDSGELSQAKSIVNLMRSKGVEQNFKTYEILIGVMVHQGDISEAC 486
            CKP+VVTYN +L AL  +G+  +A+ ++  M  KGV  N  TY I++  +V +G+I E+C
Sbjct: 362  CKPNVVTYNTLLGALSVAGDFVKARELMKEMGWKGVGLNLHTYRIVLDGLVGKGEIGESC 421

Query: 485  NLLEQMVGKGLVQQAISFFKLLPDFDQTGSVSRVLDVLRDII 360
             LLE+M+ K L  ++ +F  ++    Q    +  +++ + ++
Sbjct: 422  LLLEEMLEKCLFPRSSTFDNIIFQMCQKDLFTEAMELTKKVV 463


>ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|222855149|gb|EEE92696.1|
            predicted protein [Populus trichocarpa]
          Length = 506

 Score =  385 bits (989), Expect = e-104
 Identities = 191/383 (49%), Positives = 267/383 (69%), Gaps = 3/383 (0%)
 Frame = -3

Query: 1559 HLLYSLINSFAIYECTPTPDAYHFVIKSLIKTRQFHQLHPLLDRLENHEIFETPEIIFID 1380
            HLL SLI+SF+IY+  P P A+ F+ K+L+KT QFH +  +LD LE  E FE PE  F  
Sbjct: 59   HLLSSLIHSFSIYDVEPAPKAFDFIFKTLVKTSQFHHIPSVLDHLEKVESFEPPESTFAY 118

Query: 1379 LIQAYGNSNRFQEAIHLFFKIPNFRCNPSVDALNTLLSVLCNTPTKMECLKMVPQIVFKS 1200
            LI+ YG +N+  EAI LF++IP FRC PSV +LNTL+SVLC      + LK+VP+I+ KS
Sbjct: 119  LIEVYGRTNKTHEAIELFYRIPKFRCVPSVYSLNTLISVLCRNS---KGLKLVPEILLKS 175

Query: 1199 Q---IRLEESSYYILIKALCTINKANHAFGLLHYMIDDGFEIDERICSLIISTLCKQGDL 1029
            Q   IR+EES++ +LI ALC + K   A  +L+ M++DGF ++  I SL++S LC+Q D 
Sbjct: 176  QVMNIRVEESTFQVLITALCRVRKVGFAIEMLNCMVNDGFIVNAEIYSLLLSCLCEQKDA 235

Query: 1028 TVVEFMSYFREMKTFGFCPGRLDWCNLIRFLVKNGKGIDALNILNQMKVDGIKPDVICYT 849
            T  E + +  +++  GF PG +D+ N+IRFLVK  +G+DAL++LN MK D IKPD+ CYT
Sbjct: 236  TKFEVIGFLEQLRKLGFFPGMVDYSNVIRFLVKGKRGLDALHVLNHMKSDRIKPDIFCYT 295

Query: 848  MVLDGVISEGAYSKADELFDEMLILGVVPDICTYNVYICGLFKQKNIYAGLDLLACIEDV 669
            MVL GVI +  Y KADELFDE+L+ G+VPD  TYNVYI GL KQ N+ AG+ ++A +E++
Sbjct: 296  MVLHGVIEDKDYLKADELFDELLVFGLVPDAYTYNVYINGLCKQNNVQAGIKMVASMEEL 355

Query: 668  GCKPDVVTYNGILKALCDSGELSQAKSIVNLMRSKGVEQNFKTYEILIGVMVHQGDISEA 489
            GCKP+++TYN ++K LC  GELS+A  +V  M  KG+  N +TY I+I  +   G I EA
Sbjct: 356  GCKPNLITYNMLVKQLCKVGELSKAGELVREMGLKGIGLNMQTYRIMIDGLASNGKIVEA 415

Query: 488  CNLLEQMVGKGLVQQAISFFKLL 420
            C L E+ + KGL  Q++ F +++
Sbjct: 416  CGLFEEALDKGLCTQSLMFDEII 438



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 77/352 (21%), Positives = 138/352 (39%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1562 THLLYSLINSFAIYECTPTPDAYHFVIKSLIKTRQFHQLHPLLDRLENHEIFETPEIIFI 1383
            TH    L      + C P+  + + +I  L +  +  +L P +            E  F 
Sbjct: 129  THEAIELFYRIPKFRCVPSVYSLNTLISVLCRNSKGLKLVPEILLKSQVMNIRVEESTFQ 188

Query: 1382 DLIQAYGNSNRFQEAIHLFFKIPNFRCNPSVDALNTLLSVLCNTP--TKMECLKMVPQI- 1212
             LI A     +   AI +   + N     + +  + LLS LC     TK E +  + Q+ 
Sbjct: 189  VLITALCRVRKVGFAIEMLNCMVNDGFIVNAEIYSLLLSCLCEQKDATKFEVIGFLEQLR 248

Query: 1211 ---VFKSQIRLEESSYYILIKALCTINKANHAFGLLHYMIDDGFEIDERICSLIISTLCK 1041
                F   +      Y  +I+ L    +   A  +L++M  D  + D    ++++  + +
Sbjct: 249  KLGFFPGMV-----DYSNVIRFLVKGKRGLDALHVLNHMKSDRIKPDIFCYTMVLHGVIE 303

Query: 1040 QGDLTVVEFMSYFREMKTFGFCPGRLDWCNLIRFLVKNGKGIDALNILNQMKVDGIKPDV 861
              D    + +  F E+  FG  P    +   I  L K       + ++  M+  G KP++
Sbjct: 304  DKDYLKADEL--FDELLVFGLVPDAYTYNVYINGLCKQNNVQAGIKMVASMEELGCKPNL 361

Query: 860  ICYTMVLDGVISEGAYSKADELFDEMLILGVVPDICTYNVYICGLFKQKNIYAGLDLLAC 681
            I Y M++  +   G  SKA EL  EM + G+  ++ TY + I GL     I     L   
Sbjct: 362  ITYNMLVKQLCKVGELSKAGELVREMGLKGIGLNMQTYRIMIDGLASNGKIVEACGLFEE 421

Query: 680  IEDVGCKPDVVTYNGILKALCDSGELSQAKSIVNLMRSKGVEQNFKTYEILI 525
              D G     + ++ I+  LC      +A  ++  M  K V    + ++ L+
Sbjct: 422  ALDKGLCTQSLMFDEIICGLCHRDLSCKALKLLEKMVGKNVSPGARAWKALL 473


>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Cucumis sativus]
            gi|449483740|ref|XP_004156675.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g38420,
            mitochondrial-like [Cucumis sativus]
          Length = 491

 Score =  379 bits (973), Expect = e-102
 Identities = 187/398 (46%), Positives = 275/398 (69%), Gaps = 3/398 (0%)
 Frame = -3

Query: 1556 LLYSLINSFAIYECTPTPDAYHFVIKSLIKTRQFHQLHPLLDRLENHEIFETPEIIFIDL 1377
            LL +L+ SF  Y C PTP+AY+FV+K+L +T QFH + P+L RL+  E F+TPE IF+DL
Sbjct: 55   LLSALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDL 114

Query: 1376 IQAYGNSNRFQEAIHLFFKIPNFRCNPSVDALNTLLSVLCNTPTKMECLKMVPQIVFKSQ 1197
            I+ YG  NR Q+A+ LF +IP FRC PS  +LN+LLS L       + L ++P I+  S 
Sbjct: 115  IKLYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNA---QGLPIIPDIILNSH 171

Query: 1196 ---IRLEESSYYILIKALCTINKANHAFGLLHYMIDDGFEIDERICSLIISTLCKQGDLT 1026
               IRLE S++ ILI ALC +NK  HA  L +YMI +G+ ++ +ICSLI+++LC+Q   +
Sbjct: 172  SMGIRLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSS 231

Query: 1025 VVEFMSYFREMKTFGFCPGRLDWCNLIRFLVKNGKGIDALNILNQMKVDGIKPDVICYTM 846
                + +  EM+  GFCP  +D+ N+I+F V  G G DA+++LN+MK DG KPD++CYTM
Sbjct: 232  GDVVLGFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTM 291

Query: 845  VLDGVISEGAYSKADELFDEMLILGVVPDICTYNVYICGLFKQKNIYAGLDLLACIEDVG 666
            VL+GVI++G Y  ADELFDE+L+ G+VPDI TYNVYI GL KQ +  AGL ++  +E +G
Sbjct: 292  VLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALG 351

Query: 665  CKPDVVTYNGILKALCDSGELSQAKSIVNLMRSKGVEQNFKTYEILIGVMVHQGDISEAC 486
            C+P+V+TYN ILK+LC +GEL +A+ + + M+ KG+ +N +T+ I+I  + H G++ EAC
Sbjct: 352  CQPNVITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEAC 411

Query: 485  NLLEQMVGKGLVQQAISFFKLLPDFDQTGSVSRVLDVL 372
             LLE+M+G     Q  +F ++L    +   V + +++L
Sbjct: 412  VLLEEMLGSRFPPQISTFSEILSWLCKRHMVGKAVELL 449



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 8/349 (2%)
 Frame = -3

Query: 1547 SLINSFAIYECTPTPDAYHFVIKSLIKTRQFHQLHPLLDRLENHEI-FETPEIIFIDLIQ 1371
            +L     ++ C P+  + + ++  L +  Q   + P +  L +H +        F  LI 
Sbjct: 129  TLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDII-LNSHSMGIRLEHSTFQILIT 187

Query: 1370 AYGNSNRFQEAIHLFFKI--PNFRCNPSVDALNTLLSVLCNTPTK-----MECLKMVPQI 1212
            A    N+   A+ LF  +    +  NP + +L  +L+ LC          +  L+ + Q 
Sbjct: 188  ALCKVNKVGHAMELFNYMITEGYGLNPQICSL--ILASLCQQKKSSGDVVLGFLEEMRQK 245

Query: 1211 VFKSQIRLEESSYYILIKALCTINKANHAFGLLHYMIDDGFEIDERICSLIISTLCKQGD 1032
             F   +      Y  +IK   T    + A  LL+ M  DGF+ D    +++++ +   GD
Sbjct: 246  GFCPAV----VDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301

Query: 1031 LTVVEFMSYFREMKTFGFCPGRLDWCNLIRFLVKNGKGIDALNILNQMKVDGIKPDVICY 852
              + + +  F E+  FG  P    +   I  L K G  +  L ++  M+  G +P+VI Y
Sbjct: 302  YKMADEL--FDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITY 359

Query: 851  TMVLDGVISEGAYSKADELFDEMLILGVVPDICTYNVYICGLFKQKNIYAGLDLLACIED 672
             ++L  +   G   +A +L  +M + G+  ++ T+ + I GLF    +     LL  +  
Sbjct: 360  NVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLG 419

Query: 671  VGCKPDVVTYNGILKALCDSGELSQAKSIVNLMRSKGVEQNFKTYEILI 525
                P + T++ IL  LC    + +A  ++ LM  K      K +EIL+
Sbjct: 420  SRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILL 468