BLASTX nr result

ID: Bupleurum21_contig00007618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007618
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23653.3| unnamed protein product [Vitis vinifera]              116   2e-24
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]   116   2e-24
ref|XP_003632008.1| PREDICTED: probable methyltransferase PMT8 [...   103   1e-20
ref|XP_002883418.1| zinc finger family protein [Arabidopsis lyra...    99   3e-19
gb|AAM65682.1| unknown [Arabidopsis thaliana]                          97   1e-18

>emb|CBI23653.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  116 bits (291), Expect = 2e-24
 Identities = 69/135 (51%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
 Frame = +1

Query: 4   KLELAIYTNPQDAKPRTIIPLWKARLEELNINQADPAVVISVVSNIPXXXXXXXGLLSSE 183
           KLELAIY++ QDA+PRT I LWKA ++E      DPAV+I   S I           +S 
Sbjct: 177 KLELAIYSSLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRR-CYTSR 235

Query: 184 EARCRPQGFRQYQIKLAPAKVGDKQQLQGFCNAWKGISE-VKQPSYPFQPQVPA--ETGP 354
           EARC+P+  RQ QIKLAP K  D QQLQ FCNA KGI + +  P++    Q PA   T P
Sbjct: 236 EARCKPRALRQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPTAP 295

Query: 355 SNAGNLELAMAISAS 399
             A +LELAMAI+AS
Sbjct: 296 PTAEDLELAMAINAS 310


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score =  116 bits (291), Expect = 2e-24
 Identities = 69/135 (51%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
 Frame = +1

Query: 4   KLELAIYTNPQDAKPRTIIPLWKARLEELNINQADPAVVISVVSNIPXXXXXXXGLLSSE 183
           KLELAIY++ QDA+PRT I LWKA ++E      DPAV+I   S I           +S 
Sbjct: 177 KLELAIYSSLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRR-CYTSR 235

Query: 184 EARCRPQGFRQYQIKLAPAKVGDKQQLQGFCNAWKGISE-VKQPSYPFQPQVPA--ETGP 354
           EARC+P+  RQ QIKLAP K  D QQLQ FCNA KGI + +  P++    Q PA   T P
Sbjct: 236 EARCKPRALRQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPTAP 295

Query: 355 SNAGNLELAMAISAS 399
             A +LELAMAI+AS
Sbjct: 296 PTAEDLELAMAINAS 310


>ref|XP_003632008.1| PREDICTED: probable methyltransferase PMT8 [Vitis vinifera]
          Length = 988

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/125 (47%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
 Frame = +1

Query: 4   KLELAIYTNPQDAKPRTIIPLWKARLEELNINQADPAVVISVVSNIPXXXXXXXGLLSSE 183
           KLELAIY++ QDA+PRT I LWKA ++E      DPAV+I   S I           +S 
Sbjct: 177 KLELAIYSSLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRR-CYTSR 235

Query: 184 EARCRPQGFRQYQIKLAPAKVGDKQQLQGFCNAWKGISEVKQPSYPFQ-----PQVPAET 348
           EARC+P+  RQ QIKLAP K  D QQLQ FCNA KGI +VK      Q     P +P + 
Sbjct: 236 EARCKPRALRQTQIKLAPEKKSDSQQLQWFCNACKGIPQVKYTLSHIQIETHIPDIPVQA 295

Query: 349 GPSNA 363
             ++A
Sbjct: 296 STASA 300


>ref|XP_002883418.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329258|gb|EFH59677.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 462

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/132 (46%), Positives = 79/132 (59%)
 Frame = +1

Query: 4   KLELAIYTNPQDAKPRTIIPLWKARLEELNINQADPAVVISVVSNIPXXXXXXXGLLSSE 183
           KLEL +Y + QDA+PRT++PLWKA LEE    Q+D +V+I   S IP        + +S 
Sbjct: 177 KLELVVYASLQDAQPRTMMPLWKANLEEPKAKQSDTSVMIVDNSTIPSRRMKKRRVYAS- 235

Query: 184 EARCRPQGFRQYQIKLAPAKVGDKQQLQGFCNAWKGISEVKQPSYPFQPQVPAETGPSNA 363
             R RPQ  RQ ++KLAPA  GD QQL+ FC+A KGI +  +P    Q    A   PS  
Sbjct: 236 HGRRRPQVVRQTRLKLAPATEGDSQQLKWFCDACKGIPQPMRPPVFLQTAPSAPPPPSED 295

Query: 364 GNLELAMAISAS 399
              ELAMA++AS
Sbjct: 296 ---ELAMAMNAS 304


>gb|AAM65682.1| unknown [Arabidopsis thaliana]
          Length = 462

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 59/132 (44%), Positives = 77/132 (58%)
 Frame = +1

Query: 4   KLELAIYTNPQDAKPRTIIPLWKARLEELNINQADPAVVISVVSNIPXXXXXXXGLLSSE 183
           KLEL +Y + QDA+PRT++PLWKA LEE    Q+D +V+I   S IP        + +S 
Sbjct: 177 KLELVVYASLQDAQPRTVMPLWKANLEEPKAKQSDTSVMIVDNSTIPSRRMKKRRVCAS- 235

Query: 184 EARCRPQGFRQYQIKLAPAKVGDKQQLQGFCNAWKGISEVKQPSYPFQPQVPAETGPSNA 363
             R RPQ  RQ ++KLAP+  GD QQL+ FC+A KGI +   P    Q    A   PS  
Sbjct: 236 HGRRRPQVVRQTRLKLAPSTEGDSQQLKWFCDACKGIPQPMHPPVFLQAPPSAPPPPSED 295

Query: 364 GNLELAMAISAS 399
           G   LAM ++AS
Sbjct: 296 G---LAMGMNAS 304


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