BLASTX nr result

ID: Bupleurum21_contig00007616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007616
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162868.1| PREDICTED: UBX domain-containing protein 6-l...    94   1e-17
ref|XP_004151550.1| PREDICTED: uncharacterized protein LOC101209...    94   1e-17
ref|XP_003530725.1| PREDICTED: UBX domain-containing protein 6-l...    93   2e-17
ref|XP_003630914.1| UBX domain-containing protein [Medicago trun...    92   4e-17
ref|XP_002525983.1| nucleic acid binding protein, putative [Rici...    89   3e-16

>ref|XP_004162868.1| PREDICTED: UBX domain-containing protein 6-like [Cucumis sativus]
          Length = 472

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
 Frame = -3

Query: 401 SNVKQFDKPNHSNPNSTRPVSQKKYESDNQAEYINQVTNDTEMLRKLELDSESKKEGFDP 222
           S  K    P++S+ NS  PV+       N+++  N    D               +GFDP
Sbjct: 55  SKPKLVSPPSNSSANSKPPVANSIATGQNRSDPSNTSNPD-----------RIPADGFDP 103

Query: 221 FESLVTSGKRNKNGYNLDNVFECPVCGGGFVSEDEVAVHIESCLSNVESDNVCNEAKADS 42
           F+S +TSGKR+ NGY+L NVFECP+CG  + SE+EV+VH++SC+++  +    +   +D+
Sbjct: 104 FDSFITSGKRSGNGYSL-NVFECPICGRSYRSEEEVSVHVDSCVNDSTAKGAEDPPTSDA 162

Query: 41  Q--SELEVCVGAYVS 3
           +  SELE C+G ++S
Sbjct: 163 EPRSELEACIGTFLS 177


>ref|XP_004151550.1| PREDICTED: uncharacterized protein LOC101209321 [Cucumis sativus]
          Length = 324

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
 Frame = -3

Query: 401 SNVKQFDKPNHSNPNSTRPVSQKKYESDNQAEYINQVTNDTEMLRKLELDSESKKEGFDP 222
           S  K    P++S+ NS  PV+       N+++  N    D               +GFDP
Sbjct: 55  SKPKLVSPPSNSSANSKPPVANSIATGQNRSDPSNTSNPD-----------RIPADGFDP 103

Query: 221 FESLVTSGKRNKNGYNLDNVFECPVCGGGFVSEDEVAVHIESCLSNVESDNVCNEAKADS 42
           F+S +TSGKR+ NGY+L NVFECP+CG  + SE+EV+VH++SC+++  +    +   +D+
Sbjct: 104 FDSFITSGKRSGNGYSL-NVFECPICGRSYRSEEEVSVHVDSCVNDSTAKGAEDPPTSDA 162

Query: 41  Q--SELEVCVGAYVS 3
           +  SELE C+G ++S
Sbjct: 163 EPRSELEACIGTFLS 177


>ref|XP_003530725.1| PREDICTED: UBX domain-containing protein 6-like [Glycine max]
          Length = 464

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 59/141 (41%), Positives = 79/141 (56%), Gaps = 16/141 (11%)
 Frame = -3

Query: 377 PNHSNPNSTRPVSQKKYESDNQAEYINQVTNDTEMLRKLE----LDSESKKEGFDPFESL 210
           P +SNP + RP    +  S + A     VTN     +K E     D   K +GFDPF+SL
Sbjct: 41  PANSNP-TPRPYPNSQKPSSSSA-----VTNPKPSPQKTEQNKTTDKPRKDDGFDPFDSL 94

Query: 209 VTSGKRNKNGYNLDNVFECPVCGGGFVSEDEVAVHIESCLSN------------VESDNV 66
           VT+  R++NGY+L NVFECP+C   F SE+EV+ H++ CL+N             ESD  
Sbjct: 95  VTNSNRSQNGYSL-NVFECPICKQPFRSEEEVSAHVDGCLNNPVERGSDDGNGVSESDGG 153

Query: 65  CNEAKADSQSELEVCVGAYVS 3
            N    D+ +ELEVCVG Y+S
Sbjct: 154 SN----DTNTELEVCVGTYIS 170


>ref|XP_003630914.1| UBX domain-containing protein [Medicago truncatula]
           gi|355524936|gb|AET05390.1| UBX domain-containing
           protein [Medicago truncatula]
          Length = 463

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/87 (52%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
 Frame = -3

Query: 236 EGFDPFESLVTSGKRNKNGYNLDNVFECPVCGGGFVSEDEVAVHIESCLSN-VESDNVCN 60
           +GFDPF+SLVTS +R++NGY+L NV+ECP+C   F SEDEV  H+ESCLSN +E+D+V  
Sbjct: 85  DGFDPFDSLVTSSQRSQNGYSL-NVYECPICKQPFRSEDEVTEHVESCLSNPIENDDVDE 143

Query: 59  EA--------KADSQSELEVCVGAYVS 3
           +          ++S +ELE+C+G YVS
Sbjct: 144 KCVSKLKESQVSESNTELEICIGTYVS 170


>ref|XP_002525983.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534715|gb|EEF36407.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 470

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
 Frame = -3

Query: 440 SDNQAVINRSNYDSNVKQFDKPNHS-NPNSTRPVSQKKYESDNQAEYINQVTNDTEMLRK 264
           S +   IN++   +   Q   P  + NP+ ++ + Q+   SD      N + N       
Sbjct: 44  SSSSGPINQNPIHAPYSQSTHPKPTPNPSISKSLPQQTPTSDQNQNKANLIPNP------ 97

Query: 263 LELDSESKKEGFDPFESLVTSGKRNKNGYNLDNVFECPVCGGGFVSEDEVAVHIESCL-S 87
                    +GF+PF+SL+T+G+R++NGY+L NVFECP+CG  F SE EV++H+ESC+ +
Sbjct: 98  ------KPADGFNPFDSLITTGERSQNGYSL-NVFECPICGQPFGSEGEVSIHVESCVDN 150

Query: 86  NVESDNVCNEAKADSQSELEVCVGAYVS 3
           N  S  + +     S S L+ CV AY+S
Sbjct: 151 NKNSSALVDGGNEYSGSGLQACVSAYIS 178


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