BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007608
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]     159   2e-36
ref|XP_001754987.1| predicted protein [Physcomitrella patens sub...    86   3e-14
ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar pr...    85   4e-14
ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumi...    85   4e-14
ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis...    84   6e-14

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score =  159 bits (401), Expect = 2e-36
 Identities = 104/232 (44%), Positives = 138/232 (59%), Gaps = 2/232 (0%)
 Frame = +1

Query: 649  FLFELALGYALFDTRDMNLHPGVVTTFKISEKYLNNN--PFTLRAFYPFPSPGDALVQMK 822
            F  E A GYALF  R +N     +  ++ +E+Y+N +  PF L+A+ PF S G+AL+QM 
Sbjct: 70   FFVECATGYALFLARGINDID--MNKYQPAEEYINRSDTPFELKAYLPFSSLGEALLQMN 127

Query: 823  AICTSTVTKELKSFIADNIPEPSSGYVLGVSTPRLAETMCSAARKNCISGQLTDHVMRAL 1002
            AI  S+VT+ L  FI  N   P   +VL  + P L E + +  R +  S  LT  VMR L
Sbjct: 128  AISNSSVTEMLIKFIQKNFEPPFHRHVLTTADPVLGEKIVNNVRLSDHSSLLTLSVMRGL 187

Query: 1003 RVKIDKLIVGLKPGDLKRAQLNLARSYHRQGGYHRQSRVCKESSNVQRIFQNVNVHKVMV 1182
            R KIDKLI GL+PG+L +AQ  LA  Y  Q     +  +    S V     +    +VMV
Sbjct: 188  REKIDKLI-GLQPGELDKAQRQLAHLYKDQ-----KRTILDTKSPVPVSSSSFLQEQVMV 241

Query: 1183 EPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEYRV 1338
             PH+FEG +  K  GKKN +CT+NLVPG+ LYG++LI V+NED  TEVEYRV
Sbjct: 242  VPHRFEGFFNAK--GKKNILCTRNLVPGEALYGEKLIHVQNEDG-TEVEYRV 290


>ref|XP_001754987.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162694091|gb|EDQ80441.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 590

 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
 Frame = +1

Query: 652  LFELALGYALFDTRDMNLHPGVVTTFKISEKYLNNNPF----TLRAFYPFPSPGDALVQM 819
            L+E A GYALF+T  M L         I E  ++ N F     L AF PF S  DAL Q 
Sbjct: 6    LYESASGYALFET--MGLDEIGQNAEAIQESIMDLNRFGKVVKLLAFSPFTSAADALEQC 63

Query: 820  KAICTSTVTKELKSFIADNIPEPSSG----YVLGVSTPRLAETMCSAARKNCISGQLTDH 987
             A+    +T ELK+F+  N+P+  +G      LGV+ P+L   +  A    C S    + 
Sbjct: 64   NAVTEGIMTAELKNFLELNLPKAKAGKKAKVSLGVAEPKLGSAILEATSIPCQSNDYVNE 123

Query: 988  VMRALRVKIDKLIVGLKPGDLKRAQLNLARSYHR 1089
             +R +R    + I  LK GD+++AQL LA SY R
Sbjct: 124  FLRGVRFHFSRFIKDLKEGDIEKAQLGLAHSYSR 157


>ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 56-like [Cucumis
            sativus]
          Length = 552

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
 Frame = +1

Query: 652  LFELALGYALFDTRDMNLHPGVVTTFKISEKYLNN--NPFTLRAFYPFPSPGDALVQMKA 825
            L+E A GYALF    ++         + S   LN       L AF+PF S  DAL Q  +
Sbjct: 7    LYESASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALKQCNS 66

Query: 826  ICTSTVTKELKSFIADNIPEPSSG----YVLGVSTPRLAETMCSAARKNCISGQLTDHVM 993
            +    +T EL+SF+  N+P+   G    +VLG++ P++   +    +  C S +    ++
Sbjct: 67   VSEGLMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNEFVLELL 126

Query: 994  RALRVKIDKLIVGLKPGDLKRAQLNLARSYHRQGGYHRQSRVCKESSNVQRIF 1152
            R +R+  DK I  LK GDL++AQL L  SY R       +RV  ++  +Q IF
Sbjct: 127  RGVRLHFDKFIKDLKQGDLEKAQLGLGHSYSRAKVKFNVNRV--DNMVIQAIF 177


>ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumis sativus]
          Length = 552

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
 Frame = +1

Query: 652  LFELALGYALFDTRDMNLHPGVVTTFKISEKYLNN--NPFTLRAFYPFPSPGDALVQMKA 825
            L+E A GYALF    ++         + S   LN       L AF+PF S  DAL Q  +
Sbjct: 7    LYESASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALKQCNS 66

Query: 826  ICTSTVTKELKSFIADNIPEPSSG----YVLGVSTPRLAETMCSAARKNCISGQLTDHVM 993
            +    +T EL+SF+  N+P+   G    +VLG++ P++   +    +  C S +    ++
Sbjct: 67   VSEGLMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNEFVLELL 126

Query: 994  RALRVKIDKLIVGLKPGDLKRAQLNLARSYHRQGGYHRQSRVCKESSNVQRIF 1152
            R +R+  DK I  LK GDL++AQL L  SY R       +RV  ++  +Q IF
Sbjct: 127  RGVRLHFDKFIKDLKQGDLEKAQLGLGHSYSRAKVKFNVNRV--DNMVIQAIF 177


>ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis thaliana]
            gi|6056371|gb|AAF02835.1|AC009894_6 nucleolar protein
            [Arabidopsis thaliana]
            gi|11878189|gb|AAG40838.1|AF302492_1 NOP56-like protein
            [Arabidopsis thaliana] gi|14517412|gb|AAK62596.1|
            At1g56110/T6H22_9 [Arabidopsis thaliana]
            gi|20857405|gb|AAM26718.1| At1g56110/T6H22_9 [Arabidopsis
            thaliana] gi|21592692|gb|AAM64641.1| SAR DNA binding
            protein, putative [Arabidopsis thaliana]
            gi|332195224|gb|AEE33345.1| homolog of nucleolar protein
            NOP56 [Arabidopsis thaliana]
          Length = 522

 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
 Frame = +1

Query: 634  MEHYVFLFELALGYALFDTR---DMNLHPGVVTTFKISEKYLNNNPFTLRAFYPFPSPGD 804
            M  YV ++E + GY LF+     ++  +   V T  +S+         L AF+PF S  D
Sbjct: 1    MAMYV-IYESSSGYGLFEVHGLDEIGQNTEAVRT-SVSDLSRFGRVVQLTAFHPFESALD 58

Query: 805  ALVQMKAICTSTVTKELKSFIADNIPEPSSG----YVLGVSTPRLAETMCSAARKNCISG 972
            AL Q+ A+    +T EL+SF+  N+P+   G    + LG++ P+L   +  A +  C S 
Sbjct: 59   ALNQVNAVSEGVMTDELRSFLELNLPKVKEGKKPKFSLGLAEPKLGSHIFEATKIPCQSN 118

Query: 973  QLTDHVMRALRVKIDKLIVGLKPGDLKRAQLNLARSYHRQGGYHRQSRVCKESSNVQRIF 1152
            +    ++R +R   D+ I  LKPGDL+++QL LA SY R       +RV  ++  +Q IF
Sbjct: 119  EFVLELLRGVRQHFDRFIKDLKPGDLEKSQLGLAHSYSRAKVKFNVNRV--DNMVIQAIF 176