BLASTX nr result

ID: Bupleurum21_contig00007606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007606
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...   615   e-174
ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...   602   e-170
ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-li...   598   e-169
ref|XP_002520666.1| peptide chain release factor, putative [Rici...   598   e-168
ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|2...   596   e-168

>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
            gi|296086617|emb|CBI32252.3| unnamed protein product
            [Vitis vinifera]
          Length = 411

 Score =  615 bits (1586), Expect = e-174
 Identities = 310/373 (83%), Positives = 337/373 (90%)
 Frame = -1

Query: 1486 TKRIICTAEPYLITKLDSAEKTWKELSVKLAEPDIVTNPSEYQKLVQSMAELEEVVNTYK 1307
            T RI+C AEPYLITKL+SAEKTWKELSVKLA+PDIV+NPSEYQKL QSMAEL+EVV+T+K
Sbjct: 38   TPRIVCMAEPYLITKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFK 97

Query: 1306 IFKDCQMQXXXXXXXXXXEGSDTDMAEMILSEIDTLSKQLKELEENIKQLLIPSDPLDAR 1127
             FKDC+ Q          +G D DMAEMI  EI TL+ QLKELEENIK LL+PSDPLD+R
Sbjct: 98   RFKDCEKQLEEAKALAKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSR 157

Query: 1126 NILLEVRAGTGGDEAGIWAGDLVRMYQRFCERSSLKYTPLSCSEAEKGGFKTYVMEIKGK 947
            NILLEVRAGTGGDEAGIWAGDLVRMYQ++ ER+S KY P+S SEAEKGGFKTYV+E+KG 
Sbjct: 158  NILLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGN 217

Query: 946  RVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVEIVIDPKDIELTTARSG 767
             VYSKLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPE DEVE+VIDPKDIELTTARSG
Sbjct: 218  CVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSG 277

Query: 766  GAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKNRALQLLRAKLYEIKLREQQESI 587
            GAGGQNVNKVETAVDLFHKPTGIRIFCTEER+QL+N++RALQLLRAKLYEIK+REQQE I
Sbjct: 278  GAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQELI 337

Query: 586  RNERKMQVGSGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCATMEQKE 407
            RN+RK QVG+GARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSC  MEQKE
Sbjct: 338  RNQRKSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCVAMEQKE 397

Query: 406  LLEELALSVGSPA 368
            LLEELA SV +PA
Sbjct: 398  LLEELAHSVATPA 410


>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score =  602 bits (1553), Expect = e-170
 Identities = 300/371 (80%), Positives = 335/371 (90%)
 Frame = -1

Query: 1480 RIICTAEPYLITKLDSAEKTWKELSVKLAEPDIVTNPSEYQKLVQSMAELEEVVNTYKIF 1301
            RI+C AEPYLITKL+SAEKTWKELSVKLA+PD+V++P EYQKL QS++EL+EVV+TY+ F
Sbjct: 58   RIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSDPKEYQKLAQSVSELDEVVSTYRRF 117

Query: 1300 KDCQMQXXXXXXXXXXEGSDTDMAEMILSEIDTLSKQLKELEENIKQLLIPSDPLDARNI 1121
            KDC+            +G+D DM EMI  EIDTLSKQL ELEE IK LL+PSDP+DARNI
Sbjct: 118  KDCEKVLEETKALAKDDGNDEDMVEMISFEIDTLSKQLAELEEKIKVLLLPSDPMDARNI 177

Query: 1120 LLEVRAGTGGDEAGIWAGDLVRMYQRFCERSSLKYTPLSCSEAEKGGFKTYVMEIKGKRV 941
            LLEVRAGTGGDEAGIWAGDLVRMY+R+ ER+S KY+ +S S AEKGG+KTYVMEIKG RV
Sbjct: 178  LLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRV 237

Query: 940  YSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVEIVIDPKDIELTTARSGGA 761
            YSKLKYESGVHRVQRVP TE QGRVHTSTATVAIMPE DEVE+VIDPKDIELTTARSGGA
Sbjct: 238  YSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGA 297

Query: 760  GGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKNRALQLLRAKLYEIKLREQQESIRN 581
            GGQNVNKVETA+DLFHKPTGIRIFCTEER+QLKN+NRA QLLRAKLYEIK+REQQES+RN
Sbjct: 298  GGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRN 357

Query: 580  ERKMQVGSGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCATMEQKELL 401
            +RK+QVG+GAR+EKIRTYNYKDNRVTDHRLK+N+ELTSFLDGDIE AVQSC TMEQKELL
Sbjct: 358  QRKLQVGTGARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELL 417

Query: 400  EELALSVGSPA 368
            EELA SVG+PA
Sbjct: 418  EELAESVGAPA 428


>ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 428

 Score =  598 bits (1543), Expect = e-169
 Identities = 296/371 (79%), Positives = 335/371 (90%)
 Frame = -1

Query: 1480 RIICTAEPYLITKLDSAEKTWKELSVKLAEPDIVTNPSEYQKLVQSMAELEEVVNTYKIF 1301
            RI+C AEPYLITKL+SAEKTW+ELSVKLA+PD+V++P EYQKL QS+AEL+EVV+TY+ F
Sbjct: 57   RIVCMAEPYLITKLESAEKTWQELSVKLADPDVVSDPKEYQKLAQSVAELDEVVSTYRRF 116

Query: 1300 KDCQMQXXXXXXXXXXEGSDTDMAEMILSEIDTLSKQLKELEENIKQLLIPSDPLDARNI 1121
            KDC+            +G+D DM EMI  EID+LSKQL ELEE +K LL+PSDP+DA+NI
Sbjct: 117  KDCEKVLEETKALAKDDGNDEDMVEMISFEIDSLSKQLAELEEKLKVLLLPSDPMDAKNI 176

Query: 1120 LLEVRAGTGGDEAGIWAGDLVRMYQRFCERSSLKYTPLSCSEAEKGGFKTYVMEIKGKRV 941
            LLEVRAGTGGDEAGIWAGDLVRMY+R+ ER+S KY+ +S S AEKGG+KTYVMEIKG RV
Sbjct: 177  LLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRV 236

Query: 940  YSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVEIVIDPKDIELTTARSGGA 761
            YSKLKYESGVHRVQRVP TE QGRVHTSTATVAIMPE DEVE++IDPKDIELTTARSGGA
Sbjct: 237  YSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVIIDPKDIELTTARSGGA 296

Query: 760  GGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKNRALQLLRAKLYEIKLREQQESIRN 581
            GGQNVNKVETA+DLFHKPTGIRIFCTEER+QLKNKNRA QLLRAKLYE+K+REQQES+RN
Sbjct: 297  GGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEMKIREQQESLRN 356

Query: 580  ERKMQVGSGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCATMEQKELL 401
            +RK+QVG+GAR+EKIRTYNYKDNRVTDHRLK+N+ELTSFLDGDIE AVQSC TMEQKELL
Sbjct: 357  QRKLQVGTGARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELL 416

Query: 400  EELALSVGSPA 368
            EELA SVG+PA
Sbjct: 417  EELAESVGAPA 427


>ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
            gi|223540051|gb|EEF41628.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 370

 Score =  598 bits (1541), Expect = e-168
 Identities = 296/365 (81%), Positives = 333/365 (91%)
 Frame = -1

Query: 1462 EPYLITKLDSAEKTWKELSVKLAEPDIVTNPSEYQKLVQSMAELEEVVNTYKIFKDCQMQ 1283
            EPYLITKL+SAEKTWKELSVKLA+PD+V+NP+EYQKL QS+AEL++VV+ Y+ FKDC+ Q
Sbjct: 5    EPYLITKLESAEKTWKELSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKDCEKQ 64

Query: 1282 XXXXXXXXXXEGSDTDMAEMILSEIDTLSKQLKELEENIKQLLIPSDPLDARNILLEVRA 1103
                      EG+D DMAEMI  EID+LS +LK LEE +K LL+PSDPLDARNI+LEVRA
Sbjct: 65   LEETKALAKEEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIMLEVRA 124

Query: 1102 GTGGDEAGIWAGDLVRMYQRFCERSSLKYTPLSCSEAEKGGFKTYVMEIKGKRVYSKLKY 923
            GTGGDEAG+WAGDLVRMY+++CE++S KY  +SCSEAEKGG+KTYVME+KG RVYSKLKY
Sbjct: 125  GTGGDEAGLWAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKY 184

Query: 922  ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVEIVIDPKDIELTTARSGGAGGQNVN 743
            ESGVHRVQRVPQTE QGRVHTSTATVAIMPE DEVE+VIDPKDIELTTARSGGAGGQNVN
Sbjct: 185  ESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 244

Query: 742  KVETAVDLFHKPTGIRIFCTEERSQLKNKNRALQLLRAKLYEIKLREQQESIRNERKMQV 563
            KVETAVDLFHKPTGIRIFCTEER+QL+NK RALQLLRAKLYE+K+REQQESIRN+RK+QV
Sbjct: 245  KVETAVDLFHKPTGIRIFCTEERTQLQNKTRALQLLRAKLYEMKVREQQESIRNQRKLQV 304

Query: 562  GSGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCATMEQKELLEELALS 383
            G+GARAEKIRTYNYKDNRVTDHRLKMNFELTSFL GDIE AVQ+CA+ EQKELLEELA S
Sbjct: 305  GTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLQGDIENAVQACASTEQKELLEELAES 364

Query: 382  VGSPA 368
            VG+PA
Sbjct: 365  VGAPA 369


>ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1|
            predicted protein [Populus trichocarpa]
          Length = 416

 Score =  596 bits (1536), Expect = e-168
 Identities = 297/373 (79%), Positives = 336/373 (90%)
 Frame = -1

Query: 1486 TKRIICTAEPYLITKLDSAEKTWKELSVKLAEPDIVTNPSEYQKLVQSMAELEEVVNTYK 1307
            T RI+C AEPYLITKL+SAEKTWKELSVKL +PD+V+NPSEYQKL QS+AEL+EVV+ +K
Sbjct: 43   TPRIVCMAEPYLITKLESAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFK 102

Query: 1306 IFKDCQMQXXXXXXXXXXEGSDTDMAEMILSEIDTLSKQLKELEENIKQLLIPSDPLDAR 1127
             FKDC+            +G+D DMAEMI  EI++LS +LK+LEE +  LL+PSDPLDAR
Sbjct: 103  RFKDCEKMLEDTRALAKEDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDAR 162

Query: 1126 NILLEVRAGTGGDEAGIWAGDLVRMYQRFCERSSLKYTPLSCSEAEKGGFKTYVMEIKGK 947
            NILLEVRAGTGGDEAG+WAGDLVRMYQR+ E++S K + +S SEAEKGG+KTYVME+KGK
Sbjct: 163  NILLEVRAGTGGDEAGLWAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGK 222

Query: 946  RVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVEIVIDPKDIELTTARSG 767
             VYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVE+VIDPK+ ELTTARSG
Sbjct: 223  SVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVEVVIDPKEYELTTARSG 282

Query: 766  GAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKNRALQLLRAKLYEIKLREQQESI 587
            GAGGQNVNKVETAVDL HKPTGIRIFCTEER+QL+N+NRALQLLRAKLYEIK+REQQESI
Sbjct: 283  GAGGQNVNKVETAVDLIHKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQESI 342

Query: 586  RNERKMQVGSGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCATMEQKE 407
            RN+RKMQVG+GARAEKIRTYNYKDNRVTDHRLK+NFELTSFL GDIE AVQ+C+ +EQKE
Sbjct: 343  RNQRKMQVGTGARAEKIRTYNYKDNRVTDHRLKVNFELTSFLAGDIENAVQACSALEQKE 402

Query: 406  LLEELALSVGSPA 368
            LLEELA SVG+PA
Sbjct: 403  LLEELAESVGAPA 415


Top