BLASTX nr result

ID: Bupleurum21_contig00007605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007605
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525006.1| PREDICTED: ferredoxin, chloroplastic-like [G...   108   1e-21
gb|AEI83424.1| chloroplast ferredoxin I [Camellia sinensis]           107   1e-21
emb|CAC38395.1| ferredoxin I [Solanum tuberosum]                      105   5e-21
ref|NP_001234059.1| ferredoxin-1, chloroplastic [Solanum lycoper...   105   5e-21
ref|XP_002269617.1| PREDICTED: ferredoxin-1, chloroplastic-like ...   104   1e-20

>ref|XP_003525006.1| PREDICTED: ferredoxin, chloroplastic-like [Glycine max]
          Length = 147

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/85 (61%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
 Frame = +3

Query: 6   TTPLSSTMLNTSFLRRQQPAATSLRA--NTGSSLFGLKSSGRGRVTCMATYKVKLITPDG 179
           T  LS TM++TSF+RRQ    TSL+   N G +LFGLKS   GRVTCMA+YKVKLITP+G
Sbjct: 4   TAALSGTMVSTSFMRRQPMTTTSLKTFPNVGEALFGLKSGRGGRVTCMASYKVKLITPEG 63

Query: 180 EKEFKCPDDTYILDEAENLGMDLPF 254
           E EF+CPDD +I+D+AE+ G++LP+
Sbjct: 64  EVEFECPDDVFIVDKAEDEGIELPY 88


>gb|AEI83424.1| chloroplast ferredoxin I [Camellia sinensis]
          Length = 147

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
 Frame = +3

Query: 3   LTTPLSSTMLNTSFLRRQQPAATSLRA--NTGSSLFGLKSSGRGRVTCMATYKVKLITPD 176
           +   LSSTM++TSFL+RQQP  TSLR+  N G +LFG+K    GRVT MA YKVKL+TP+
Sbjct: 3   MAASLSSTMVSTSFLQRQQPV-TSLRSLPNVGQALFGVKGGRGGRVTAMAMYKVKLLTPE 61

Query: 177 GEKEFKCPDDTYILDEAENLGMDLPF 254
           G +EF+CPDD YILD+AE +G+DLP+
Sbjct: 62  GPQEFECPDDVYILDQAEEIGIDLPY 87


>emb|CAC38395.1| ferredoxin I [Solanum tuberosum]
          Length = 144

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 15  LSSTMLNTSFLRRQQPAATSLRA--NTGSSLFGLKSSGRGRVTCMATYKVKLITPDGEKE 188
           +S TM++TSFL R+ P  TSL+A  N G +LFGLKS   GR+TCMA+YKVKLITPDG  E
Sbjct: 4   ISGTMISTSFLPRK-PVVTSLKAISNVGEALFGLKSGRNGRITCMASYKVKLITPDGPIE 62

Query: 189 FKCPDDTYILDEAENLGMDLPF 254
           F+CPDD YILD+AE  G DLP+
Sbjct: 63  FECPDDVYILDQAEEEGHDLPY 84


>ref|NP_001234059.1| ferredoxin-1, chloroplastic [Solanum lycopersicum]
           gi|3023752|sp|Q43517.1|FER1_SOLLC RecName:
           Full=Ferredoxin-1, chloroplastic; AltName:
           Full=Ferredoxin I; Flags: Precursor
           gi|1418982|emb|CAA99756.1| ferredoxin-I [Solanum
           lycopersicum]
          Length = 144

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 15  LSSTMLNTSFLRRQQPAATSLRA--NTGSSLFGLKSSGRGRVTCMATYKVKLITPDGEKE 188
           +S TM++TSFL R+ PA TSL+A  N G +LFGLKS   GR+TCMA+YKVKLITP+G  E
Sbjct: 4   ISGTMISTSFLPRK-PAVTSLKAISNVGEALFGLKSGRNGRITCMASYKVKLITPEGPIE 62

Query: 189 FKCPDDTYILDEAENLGMDLPF 254
           F+CPDD YILD+AE  G DLP+
Sbjct: 63  FECPDDVYILDQAEEEGHDLPY 84


>ref|XP_002269617.1| PREDICTED: ferredoxin-1, chloroplastic-like [Vitis vinifera]
          Length = 142

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 15  LSSTMLNTSFLRRQQPAATSLRA--NTGSSLFGLKSSGRGRVTCMATYKVKLITPDGEKE 188
           LS  M++TSF+RRQ    TSLRA  N G +LFGLK+ GRGRVT MA YKVKLITP+G KE
Sbjct: 4   LSGAMVSTSFIRRQP--VTSLRALPNVGQALFGLKA-GRGRVTAMAVYKVKLITPEGAKE 60

Query: 189 FKCPDDTYILDEAENLGMDLPF 254
           F+CPDD Y+LD AE +G+DLP+
Sbjct: 61  FECPDDVYVLDHAEEIGIDLPY 82


Top