BLASTX nr result

ID: Bupleurum21_contig00007598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007598
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264259.1| PREDICTED: GTPase Era-like [Vitis vinifera]       575   e-162
ref|XP_002310817.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_002521548.1| GTP-binding protein era, putative [Ricinus c...   564   e-158
gb|ABB45853.1| hypothetical protein [Eutrema halophilum]              559   e-157
ref|NP_201448.2| GTP-binding protein Era [Arabidopsis thaliana] ...   555   e-155

>ref|XP_002264259.1| PREDICTED: GTPase Era-like [Vitis vinifera]
          Length = 435

 Score =  575 bits (1482), Expect = e-162
 Identities = 286/341 (83%), Positives = 309/341 (90%), Gaps = 1/341 (0%)
 Frame = +1

Query: 1    DDESNLSV-LSLSEKPDRNTALLDDYEMEELDFAPDLDPNHRSGYVAVVGKPNVGKSTLS 177
            D+ES+ S  LSLSEKPDRN ALLDDYE+EELDFA +  PNHRSGYVAV+GKPNVGKSTL+
Sbjct: 97   DEESSASTFLSLSEKPDRNMALLDDYELEELDFASN--PNHRSGYVAVLGKPNVGKSTLA 154

Query: 178  NQMVGQKLSIVTDKPQTTRHRILGICSDSGYQMILYDTPGVIEKKMHKLDSMMMKNVRSA 357
            NQM+GQKLSIVTDKPQTTRHRILGICS   YQMILYDTPGVIEKKMHKLDSMMMKNVRSA
Sbjct: 155  NQMIGQKLSIVTDKPQTTRHRILGICSGPEYQMILYDTPGVIEKKMHKLDSMMMKNVRSA 214

Query: 358  TINADCVLVVVDACRAPENISEVLEEGRGSLESKVPTLLVLNKKDLIKPGEVAKKLEWYE 537
            TINADCV+V+VDAC+ P+ I EVLEEG G+L+ K+PTLLVLNKKDLIKPGE+AKKLEWYE
Sbjct: 215  TINADCVVVLVDACKEPQKIDEVLEEGVGNLKDKLPTLLVLNKKDLIKPGEIAKKLEWYE 274

Query: 538  KFTDVDEVIPVSAKYGHGVDDVKEWILSKLPLGPSYYPKDITSEHPERFFVAEIVREKIF 717
            KF DVDEVIPVSAKYG GVDDVK+WILSKLPLGP+YYPKDI SEHPERFFV EIVREKIF
Sbjct: 275  KFIDVDEVIPVSAKYGQGVDDVKDWILSKLPLGPAYYPKDIVSEHPERFFVGEIVREKIF 334

Query: 718  MQYRNEVPYACQVNVINYKTRPNAKDFIQVEIVVEKNSQKIILIGKEGXXXXXXXXXXXX 897
            MQYRNEVPYACQVNV++YKTRP AKDFIQVEIVVEKNSQKIILIGKEG            
Sbjct: 335  MQYRNEVPYACQVNVVSYKTRPTAKDFIQVEIVVEKNSQKIILIGKEGKALKLLATAARL 394

Query: 898  DIEDFLQKKVFLEIEVKIKENWRQDEGLLKHYGYGGQIRAL 1020
            DIEDFLQKKVFLE+EVK+KENWRQDEGLLK+YGYGGQI+AL
Sbjct: 395  DIEDFLQKKVFLEVEVKVKENWRQDEGLLKYYGYGGQIQAL 435


>ref|XP_002310817.1| predicted protein [Populus trichocarpa] gi|222853720|gb|EEE91267.1|
            predicted protein [Populus trichocarpa]
          Length = 414

 Score =  567 bits (1460), Expect = e-159
 Identities = 279/340 (82%), Positives = 302/340 (88%)
 Frame = +1

Query: 1    DDESNLSVLSLSEKPDRNTALLDDYEMEELDFAPDLDPNHRSGYVAVVGKPNVGKSTLSN 180
            +DE +  +LSLS KPDRNTALLDDYE+EEL F    + NHRSGYVAVVGKPNVGKSTLSN
Sbjct: 75   EDEMSSGLLSLSVKPDRNTALLDDYEIEELAFHDSSNSNHRSGYVAVVGKPNVGKSTLSN 134

Query: 181  QMVGQKLSIVTDKPQTTRHRILGICSDSGYQMILYDTPGVIEKKMHKLDSMMMKNVRSAT 360
            QM+GQKLSIVTDKPQTTRHRILGICS   YQMILYDTPGVIEKKMHKLDSMMMKNVRSA 
Sbjct: 135  QMIGQKLSIVTDKPQTTRHRILGICSAPDYQMILYDTPGVIEKKMHKLDSMMMKNVRSAA 194

Query: 361  INADCVLVVVDACRAPENISEVLEEGRGSLESKVPTLLVLNKKDLIKPGEVAKKLEWYEK 540
            INADCVLV+VDACRAPE I E+LEEG G+L+  VPTLLVLNKKDLIKPGE+AKKLEWYEK
Sbjct: 195  INADCVLVIVDACRAPEKIDEMLEEGVGNLKDNVPTLLVLNKKDLIKPGEIAKKLEWYEK 254

Query: 541  FTDVDEVIPVSAKYGHGVDDVKEWILSKLPLGPSYYPKDITSEHPERFFVAEIVREKIFM 720
            FT VDEVIPVSAK+G GV+D+KEWILSKLP+GP+YYPKDI SEHPERFFVAEIVREKIFM
Sbjct: 255  FTGVDEVIPVSAKFGQGVEDIKEWILSKLPMGPAYYPKDIVSEHPERFFVAEIVREKIFM 314

Query: 721  QYRNEVPYACQVNVINYKTRPNAKDFIQVEIVVEKNSQKIILIGKEGXXXXXXXXXXXXD 900
            Q+RNEVPYACQVNV+ YK RP AKDFIQVEIVVEKN+QKII+IGKEG            D
Sbjct: 315  QFRNEVPYACQVNVVGYKARPTAKDFIQVEIVVEKNTQKIIIIGKEGKALKLLATAARLD 374

Query: 901  IEDFLQKKVFLEIEVKIKENWRQDEGLLKHYGYGGQIRAL 1020
            IEDFLQKKV+LEIEVK+KENWRQDEGLLK+YGYGGQI AL
Sbjct: 375  IEDFLQKKVYLEIEVKVKENWRQDEGLLKYYGYGGQISAL 414


>ref|XP_002521548.1| GTP-binding protein era, putative [Ricinus communis]
            gi|223539226|gb|EEF40819.1| GTP-binding protein era,
            putative [Ricinus communis]
          Length = 443

 Score =  564 bits (1453), Expect = e-158
 Identities = 274/340 (80%), Positives = 304/340 (89%)
 Frame = +1

Query: 1    DDESNLSVLSLSEKPDRNTALLDDYEMEELDFAPDLDPNHRSGYVAVVGKPNVGKSTLSN 180
            ++E   + LSLS KP+RN ALLDDYE+EELD+A D  PNHRSGYVAVVGKPNVGKSTLSN
Sbjct: 106  EEEEETNTLSLSVKPERNMALLDDYELEELDYASD--PNHRSGYVAVVGKPNVGKSTLSN 163

Query: 181  QMVGQKLSIVTDKPQTTRHRILGICSDSGYQMILYDTPGVIEKKMHKLDSMMMKNVRSAT 360
            QM+GQKLSIVTDKPQTTRHRILGICS   YQM+LYDTPGVI+K+MHKLDSMMMKNVR+A 
Sbjct: 164  QMIGQKLSIVTDKPQTTRHRILGICSGPDYQMVLYDTPGVIQKQMHKLDSMMMKNVRNAA 223

Query: 361  INADCVLVVVDACRAPENISEVLEEGRGSLESKVPTLLVLNKKDLIKPGEVAKKLEWYEK 540
            INADCVLV+VDAC+ PE I EVLEEG GSL+ K P LLVLNKKDLIKPGE+AKKLEWYEK
Sbjct: 224  INADCVLVIVDACKVPEKIDEVLEEGVGSLKDKPPILLVLNKKDLIKPGEIAKKLEWYEK 283

Query: 541  FTDVDEVIPVSAKYGHGVDDVKEWILSKLPLGPSYYPKDITSEHPERFFVAEIVREKIFM 720
            FTDVDEVIPVSAKYGHGV+D+K+WILSKLP GP+YYPKDI SEHPERFFVAEIVREKIFM
Sbjct: 284  FTDVDEVIPVSAKYGHGVEDIKDWILSKLPFGPAYYPKDIVSEHPERFFVAEIVREKIFM 343

Query: 721  QYRNEVPYACQVNVINYKTRPNAKDFIQVEIVVEKNSQKIILIGKEGXXXXXXXXXXXXD 900
            Q+RNEVPYACQVNV++YK+RP AKDFIQ+EIVVEKNSQKII+IGKEG            D
Sbjct: 344  QFRNEVPYACQVNVVSYKSRPTAKDFIQMEIVVEKNSQKIIIIGKEGRALKLLATASRLD 403

Query: 901  IEDFLQKKVFLEIEVKIKENWRQDEGLLKHYGYGGQIRAL 1020
            IEDFLQKKV+LEIEVK+K+NWRQDEGLL +YGYGG+IRAL
Sbjct: 404  IEDFLQKKVYLEIEVKVKDNWRQDEGLLNYYGYGGKIRAL 443


>gb|ABB45853.1| hypothetical protein [Eutrema halophilum]
          Length = 429

 Score =  559 bits (1440), Expect = e-157
 Identities = 275/340 (80%), Positives = 298/340 (87%)
 Frame = +1

Query: 1    DDESNLSVLSLSEKPDRNTALLDDYEMEELDFAPDLDPNHRSGYVAVVGKPNVGKSTLSN 180
            D     S+LSLS KPDRN ALLDDYEMEEL   PD   NHRSGYVAV+G PNVGKSTLSN
Sbjct: 92   DISDEASLLSLSMKPDRNMALLDDYEMEELGHTPDT--NHRSGYVAVLGMPNVGKSTLSN 149

Query: 181  QMVGQKLSIVTDKPQTTRHRILGICSDSGYQMILYDTPGVIEKKMHKLDSMMMKNVRSAT 360
            QM+GQK+SIVTDKPQTTRHRILGICS   YQMILYDTPGVIEKKMH+LD+MMMKNVR A 
Sbjct: 150  QMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAA 209

Query: 361  INADCVLVVVDACRAPENISEVLEEGRGSLESKVPTLLVLNKKDLIKPGEVAKKLEWYEK 540
            INADCV+V+VDAC+ P NI EVL+EG G+LE + P LLV+NKKDLIKPGE+AKKLEWYEK
Sbjct: 210  INADCVVVLVDACKMPANIEEVLKEGLGNLEKRPPMLLVMNKKDLIKPGEIAKKLEWYEK 269

Query: 541  FTDVDEVIPVSAKYGHGVDDVKEWILSKLPLGPSYYPKDITSEHPERFFVAEIVREKIFM 720
            FTDVDEVIPVSAKYGHGV+DVKEWILSKLP GP YYPKDI SEHPERFFVAEIVREKIFM
Sbjct: 270  FTDVDEVIPVSAKYGHGVEDVKEWILSKLPFGPPYYPKDIVSEHPERFFVAEIVREKIFM 329

Query: 721  QYRNEVPYACQVNVINYKTRPNAKDFIQVEIVVEKNSQKIILIGKEGXXXXXXXXXXXXD 900
            QYRNEVPYACQVNV++YKTRP AKDFIQVE+VV+KNSQKIILIGKEG            D
Sbjct: 330  QYRNEVPYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGKEGKALKTLATAARLD 389

Query: 901  IEDFLQKKVFLEIEVKIKENWRQDEGLLKHYGYGGQIRAL 1020
            IEDFLQKKVFLE+EVK+KENWRQDEGLLK+YGYGGQIRA+
Sbjct: 390  IEDFLQKKVFLEVEVKVKENWRQDEGLLKYYGYGGQIRAM 429


>ref|NP_201448.2| GTP-binding protein Era [Arabidopsis thaliana]
            gi|17473914|gb|AAL38371.1| GTP-binding protein-like
            [Arabidopsis thaliana] gi|20259794|gb|AAM13244.1|
            GTP-binding protein-like [Arabidopsis thaliana]
            gi|332010835|gb|AED98218.1| GTP-binding protein Era
            [Arabidopsis thaliana]
          Length = 427

 Score =  555 bits (1429), Expect = e-155
 Identities = 271/334 (81%), Positives = 296/334 (88%)
 Frame = +1

Query: 19   SVLSLSEKPDRNTALLDDYEMEELDFAPDLDPNHRSGYVAVVGKPNVGKSTLSNQMVGQK 198
            S+LSLS KPDRN ALLDDYEMEEL   P+   +HRSGYVAVVG PNVGKSTLSNQM+GQK
Sbjct: 96   SLLSLSMKPDRNMALLDDYEMEELGHTPNT--HHRSGYVAVVGMPNVGKSTLSNQMIGQK 153

Query: 199  LSIVTDKPQTTRHRILGICSDSGYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCV 378
            +SIVTDKPQTTRHRILGICS   YQMILYDTPGVIEKKMH+LD+MMMKNVR A INADCV
Sbjct: 154  ISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVIEKKMHRLDTMMMKNVRDAAINADCV 213

Query: 379  LVVVDACRAPENISEVLEEGRGSLESKVPTLLVLNKKDLIKPGEVAKKLEWYEKFTDVDE 558
            +++VDAC+ P NI EVL+EG G LE K P LLV+NKKDLIKPGE+AKKLEWYEKFTDVDE
Sbjct: 214  VILVDACKTPTNIEEVLKEGLGDLEKKPPMLLVMNKKDLIKPGEIAKKLEWYEKFTDVDE 273

Query: 559  VIPVSAKYGHGVDDVKEWILSKLPLGPSYYPKDITSEHPERFFVAEIVREKIFMQYRNEV 738
            VIPVSAKYGHG++DVKEWILSKLP GP YYPKDI SEHPERFFV+EIVREKIFMQYRNEV
Sbjct: 274  VIPVSAKYGHGIEDVKEWILSKLPFGPPYYPKDIVSEHPERFFVSEIVREKIFMQYRNEV 333

Query: 739  PYACQVNVINYKTRPNAKDFIQVEIVVEKNSQKIILIGKEGXXXXXXXXXXXXDIEDFLQ 918
            PYACQVNV++YKTRP AKDFIQVE+VV+KNSQKIILIGKEG            DIEDFLQ
Sbjct: 334  PYACQVNVLSYKTRPAAKDFIQVEVVVDKNSQKIILIGKEGKALKTLATAARLDIEDFLQ 393

Query: 919  KKVFLEIEVKIKENWRQDEGLLKHYGYGGQIRAL 1020
            KKVFLE+EVK+KENWRQDEGLLK+YGYGGQIRA+
Sbjct: 394  KKVFLEVEVKVKENWRQDEGLLKYYGYGGQIRAM 427


Top