BLASTX nr result
ID: Bupleurum21_contig00007594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00007594
(1027 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-contai... 188 8e-73
ref|XP_002517064.1| coated vesicle membrane protein, putative [R... 185 8e-70
ref|XP_004134119.1| PREDICTED: transmembrane emp24 domain-contai... 186 2e-68
ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing p... 185 2e-68
ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arab... 184 4e-68
>ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-containing protein A [Vitis
vinifera] gi|297737114|emb|CBI26315.3| unnamed protein
product [Vitis vinifera]
Length = 215
Score = 188 bits (478), Expect(2) = 8e-73
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +2
Query: 422 PRSGMYKFCFHNSYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTA 601
PRSGMYKFCF NSY+TPETVSFYIHVGHIPNEH+LAKDEHLDPINVKIAELREALESVTA
Sbjct: 98 PRSGMYKFCFQNSYATPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVTA 157
Query: 602 EQKYLKARDARHRRTNESTRKRVIFYTLAEYVLLALAS 715
EQKYLKARD RHR TNESTRKRVIFYTL EY+LLALAS
Sbjct: 158 EQKYLKARDTRHRHTNESTRKRVIFYTLGEYLLLALAS 195
Score = 112 bits (281), Expect(2) = 8e-73
Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Frame = +3
Query: 108 MERKRWSKLALGFLLV--FSVCVRDLSALSITVNDVECVYEYVLYEGDTISGNFVVVDHD 281
MER+ + A GF+ + F + +SALS+TVN+VECVYEYV+YEGDT+SGNFVVVDHD
Sbjct: 1 MERRHTHRCATGFIFIALFFSFIHRISALSVTVNEVECVYEYVIYEGDTVSGNFVVVDHD 60
Query: 282 IFWGSDHPGIDMIVTSP 332
IFWGSDHPGID VTSP
Sbjct: 61 IFWGSDHPGIDFTVTSP 77
>ref|XP_002517064.1| coated vesicle membrane protein, putative [Ricinus communis]
gi|223543699|gb|EEF45227.1| coated vesicle membrane
protein, putative [Ricinus communis]
Length = 210
Score = 185 bits (469), Expect(2) = 8e-70
Identities = 89/98 (90%), Positives = 92/98 (93%)
Frame = +2
Query: 422 PRSGMYKFCFHNSYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTA 601
PRSGMYKFCFHN YSTPETVSFYIHVGHIPN HDLAKDEHL+PINVKIAELREALESVTA
Sbjct: 93 PRSGMYKFCFHNPYSTPETVSFYIHVGHIPNAHDLAKDEHLNPINVKIAELREALESVTA 152
Query: 602 EQKYLKARDARHRRTNESTRKRVIFYTLAEYVLLALAS 715
EQKYLKARDARHRRTNESTRKRVI YT+ EY+LL L S
Sbjct: 153 EQKYLKARDARHRRTNESTRKRVIGYTVGEYILLGLVS 190
Score = 106 bits (264), Expect(2) = 8e-70
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +3
Query: 138 LGFLLVFSVCVRDLSALSITVNDVECVYEYVLYEGDTISGNFVVVDHDIFWGSDHPGIDM 317
+G LL+ ++ R +S+LS+TVNDVECVYEYVLYEGDT+SGNFVVVDHDIFW SDHPGID+
Sbjct: 9 VGILLLMNLIGR-ISSLSVTVNDVECVYEYVLYEGDTVSGNFVVVDHDIFWSSDHPGIDL 67
Query: 318 IVTSP 332
VTSP
Sbjct: 68 TVTSP 72
>ref|XP_004134119.1| PREDICTED: transmembrane emp24 domain-containing protein
p24beta3-like [Cucumis sativus]
gi|449504149|ref|XP_004162266.1| PREDICTED:
transmembrane emp24 domain-containing protein
p24beta3-like [Cucumis sativus]
Length = 215
Score = 186 bits (471), Expect(2) = 2e-68
Identities = 89/98 (90%), Positives = 93/98 (94%)
Frame = +2
Query: 422 PRSGMYKFCFHNSYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTA 601
PRSGMYKFCFHN YSTPETVSFYIHVGHIPNEHD AKDEHLDPINVKIAELREALESV +
Sbjct: 98 PRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDHAKDEHLDPINVKIAELREALESVIS 157
Query: 602 EQKYLKARDARHRRTNESTRKRVIFYTLAEYVLLALAS 715
EQKYLKARDARHR TNESTRKRVIFYT+ EY+LLA+AS
Sbjct: 158 EQKYLKARDARHRHTNESTRKRVIFYTVGEYLLLAVAS 195
Score = 101 bits (251), Expect(2) = 2e-68
Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Frame = +3
Query: 108 MERKRWSKLALGFLLVFSVC---VRDLSALSITVNDVECVYEYVLYEGDTISGNFVVVDH 278
MER+ K LGFLL + + + ++S+TVN+VECVYEYVLYEGD++SGNFVVVDH
Sbjct: 1 MERRVREK-GLGFLLAAFLLLSLIAGIDSISVTVNEVECVYEYVLYEGDSVSGNFVVVDH 59
Query: 279 DIFWGSDHPGIDMIVTSP 332
DIFWG+DHPGI+ VTSP
Sbjct: 60 DIFWGADHPGIEFTVTSP 77
>ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis
thaliana] gi|75273406|sp|Q9LIL4.1|P24B3_ARATH RecName:
Full=Transmembrane emp24 domain-containing protein
p24beta3; AltName: Full=p24 family protein beta2;
Short=p24beta2; AltName: Full=p24 family protein beta3;
Short=p24beta3; Flags: Precursor
gi|11994713|dbj|BAB03029.1| coated vesicle membrane
protein-like [Arabidopsis thaliana]
gi|17979492|gb|AAL50082.1| AT3g22845/MWI23_22
[Arabidopsis thaliana] gi|20147305|gb|AAM10366.1|
AT3g22845/MWI23_22 [Arabidopsis thaliana]
gi|332643162|gb|AEE76683.1| emp24/gp25L/p24 family/GOLD
domain-containing protein [Arabidopsis thaliana]
Length = 214
Score = 185 bits (470), Expect(2) = 2e-68
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 422 PRSGMYKFCFHNSYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTA 601
P+SGMYKFCFHN YSTPETVSFYIHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV A
Sbjct: 97 PKSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVA 156
Query: 602 EQKYLKARDARHRRTNESTRKRVIFYTLAEYVLLALAS 715
EQKYLKARD RHR TNESTRKRVIFYT+ EY+ LA AS
Sbjct: 157 EQKYLKARDTRHRHTNESTRKRVIFYTVGEYIFLAAAS 194
Score = 101 bits (251), Expect(2) = 2e-68
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = +3
Query: 138 LGFLLVFSVCVRDLSALSITVNDVECVYEYVLYEGDTISGNFVVVDHDIFWGSDHPGIDM 317
+G +L+ S+ +S+LS+TVND ECV EYVLYEGDT+SGNFVVVDHDIFWGSDHPG+D
Sbjct: 14 IGLILLNSI--NQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGSDHPGLDF 71
Query: 318 IVTSP 332
VTSP
Sbjct: 72 TVTSP 76
>ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arabidopsis lyrata subsp.
lyrata] gi|297329220|gb|EFH59639.1| hypothetical protein
ARALYDRAFT_479795 [Arabidopsis lyrata subsp. lyrata]
Length = 214
Score = 184 bits (467), Expect(2) = 4e-68
Identities = 87/98 (88%), Positives = 90/98 (91%)
Frame = +2
Query: 422 PRSGMYKFCFHNSYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTA 601
PRSGMYKFCFHN YSTPETVSFYIHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV A
Sbjct: 97 PRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVA 156
Query: 602 EQKYLKARDARHRRTNESTRKRVIFYTLAEYVLLALAS 715
EQKYLKARD RHR TNESTRKRVI YT+ EY+ LA AS
Sbjct: 157 EQKYLKARDTRHRHTNESTRKRVILYTVGEYIFLAAAS 194
Score = 101 bits (251), Expect(2) = 4e-68
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = +3
Query: 138 LGFLLVFSVCVRDLSALSITVNDVECVYEYVLYEGDTISGNFVVVDHDIFWGSDHPGIDM 317
+G +L+ S+ +S+LS+TVND ECV EYVLYEGDT+SGNFVVVDHDIFWGSDHPG+D
Sbjct: 14 IGLILLNSI--NQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGSDHPGLDF 71
Query: 318 IVTSP 332
VTSP
Sbjct: 72 TVTSP 76