BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007575
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               179   4e-43
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   179   4e-43
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   178   6e-43
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   178   6e-43
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               174   7e-42

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  179 bits (453), Expect = 4e-43
 Identities = 87/186 (46%), Positives = 121/186 (65%)
 Frame = -2

Query: 565 LDMQVSGDLILSTLKSMKRGRAPGPDGFNAEFFIHCWDIVGEEFTLGIQHFFNTGFIPTG 386
           L  +VS + I + L SM + ++PGPDG+ +EF+   WDI+G+EFTL +Q FF  GF+P G
Sbjct: 96  LTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKG 155

Query: 385 FQATSIALVPKCATPSEMSDFILISLCSTVYKCISKILANRLKSVMNSIIDKAQSAFVPG 206
             +  +AL+PK     EM D+  IS C+ +YK ISKI+ANRLK ++   I + QSAFV  
Sbjct: 156 INSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKD 215

Query: 205 RKISDNILIAQELFRGYNRMNGAPRCAIKVDLHKAFDSVNWDFLLKLLYKHKFPPKFAFW 26
           R + +N+L+A EL + Y++ + + RCAIK+D+ KAFDSV W FL   L    F P F  W
Sbjct: 216 RLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHW 275

Query: 25  IKSCIT 8
           I  CIT
Sbjct: 276 INLCIT 281


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  179 bits (453), Expect = 4e-43
 Identities = 89/188 (47%), Positives = 120/188 (63%)
 Frame = -2

Query: 571  NYLDMQVSGDLILSTLKSMKRGRAPGPDGFNAEFFIHCWDIVGEEFTLGIQHFFNTGFIP 392
            N L  +V+G+ I   L +M   ++PGPDG+ +EFF   W + G +F   IQ FF  GF+P
Sbjct: 744  NILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLP 803

Query: 391  TGFQATSIALVPKCATPSEMSDFILISLCSTVYKCISKILANRLKSVMNSIIDKAQSAFV 212
             G  AT +AL+PK     EM D+  IS C+ +YK ISKILANRLK ++ S I + QSAFV
Sbjct: 804  KGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFV 863

Query: 211  PGRKISDNILIAQELFRGYNRMNGAPRCAIKVDLHKAFDSVNWDFLLKLLYKHKFPPKFA 32
              R + +N+L+A EL + Y++ +  PRCA+K+D+ KAFDSV W FLL  L    FP  F 
Sbjct: 864  KERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFR 923

Query: 31   FWIKSCIT 8
             WIK CI+
Sbjct: 924  HWIKLCIS 931


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  178 bits (451), Expect = 6e-43
 Identities = 87/186 (46%), Positives = 120/186 (64%)
 Frame = -2

Query: 565 LDMQVSGDLILSTLKSMKRGRAPGPDGFNAEFFIHCWDIVGEEFTLGIQHFFNTGFIPTG 386
           L   VS + I   + SM   ++PGPDG+ AEF+   W+I+G EF L IQ FF  GF+P G
Sbjct: 337 LTNHVSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKG 396

Query: 385 FQATSIALVPKCATPSEMSDFILISLCSTVYKCISKILANRLKSVMNSIIDKAQSAFVPG 206
             +T +AL+PK     EM D+  IS C+ +YK ISKI+ANRLK V+   I   QSAFV  
Sbjct: 397 INSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKD 456

Query: 205 RKISDNILIAQELFRGYNRMNGAPRCAIKVDLHKAFDSVNWDFLLKLLYKHKFPPKFAFW 26
           R + +N+L+A E+ + Y++ + + RCA+K+D+ KAFDSV W FL+ +L    FPP+F  W
Sbjct: 457 RLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHW 516

Query: 25  IKSCIT 8
           I  CIT
Sbjct: 517 ITLCIT 522


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  178 bits (451), Expect = 6e-43
 Identities = 86/186 (46%), Positives = 117/186 (62%)
 Frame = -2

Query: 565  LDMQVSGDLILSTLKSMKRGRAPGPDGFNAEFFIHCWDIVGEEFTLGIQHFFNTGFIPTG 386
            L   VS   I   L SM   ++PGPDG+ +EF+   WDI+G EF L ++ FF  GF+P G
Sbjct: 864  LTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKG 923

Query: 385  FQATSIALVPKCATPSEMSDFILISLCSTVYKCISKILANRLKSVMNSIIDKAQSAFVPG 206
               T +AL+PK     EM D+  IS C+ +YK ISKI+ANRLK V+ + I   QSAFV  
Sbjct: 924  VNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKD 983

Query: 205  RKISDNILIAQELFRGYNRMNGAPRCAIKVDLHKAFDSVNWDFLLKLLYKHKFPPKFAFW 26
            R + +N+L+A EL + Y++   + RCAIK+D+ KAFDSV W FL  +L    FPP+F  W
Sbjct: 984  RLLIENLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQWSFLKNVLSALDFPPEFVHW 1043

Query: 25   IKSCIT 8
            +  C+T
Sbjct: 1044 VMLCVT 1049


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  174 bits (442), Expect = 7e-42
 Identities = 87/184 (47%), Positives = 117/184 (63%)
 Frame = -2

Query: 553 VSGDLILSTLKSMKRGRAPGPDGFNAEFFIHCWDIVGEEFTLGIQHFFNTGFIPTGFQAT 374
           VS + I   L SM   ++PGPDGF +EFF   W+I+G EF L IQ FF  GF+P G  +T
Sbjct: 6   VSAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNST 65

Query: 373 SIALVPKCATPSEMSDFILISLCSTVYKCISKILANRLKSVMNSIIDKAQSAFVPGRKIS 194
            +AL+PK     EM D+  IS C+ +YK ISKILANRLK ++   I   QS+FV  R + 
Sbjct: 66  ILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLI 125

Query: 193 DNILIAQELFRGYNRMNGAPRCAIKVDLHKAFDSVNWDFLLKLLYKHKFPPKFAFWIKSC 14
           +N+L+A +L + Y++ + + RCAIK+D+ KA DSV W FL+  L    FP  F  WI+ C
Sbjct: 126 ENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLC 185

Query: 13  ITNP 2
           IT P
Sbjct: 186 ITTP 189