BLASTX nr result

ID: Bupleurum21_contig00007568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007568
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511795.1| peroxisomal biogenesis factor, putative [Ric...   180   2e-43
ref|NP_001235755.1| peroxisomal biogenesis factor 11 family prot...   177   1e-42
ref|XP_002320762.1| predicted protein [Populus trichocarpa] gi|1...   177   1e-42
gb|AFK46771.1| unknown [Lotus japonicus]                              173   2e-41
ref|XP_002301325.1| predicted protein [Populus trichocarpa] gi|1...   173   3e-41

>ref|XP_002511795.1| peroxisomal biogenesis factor, putative [Ricinus communis]
           gi|223548975|gb|EEF50464.1| peroxisomal biogenesis
           factor, putative [Ricinus communis]
          Length = 235

 Score =  180 bits (456), Expect = 2e-43
 Identities = 91/118 (77%), Positives = 102/118 (86%), Gaps = 7/118 (5%)
 Frame = -1

Query: 618 RSGIYKNADRTQLIAKISLYCWMGSSVCTTLVEIGELGRLSASMKKLEKD-------KNE 460
           RSGIYKN +R  LI +ISLYCWMGSSVCTTLVEIGELGRLSAS+KKLEK+       +NE
Sbjct: 109 RSGIYKNKERADLIGRISLYCWMGSSVCTTLVEIGELGRLSASLKKLEKELKNSDKHQNE 168

Query: 459 EYRTKLQKSNERTLSFVKAAIDIVVAAGLLQLAPKKITPRVTGAFGFTSSLISCYQLL 286
           +YR KLQKSNER+L+ VKAA+DIVVA GLLQLAPKK+ PRVTGAFGF +SLISCYQLL
Sbjct: 169 QYRAKLQKSNERSLALVKAAMDIVVAVGLLQLAPKKVNPRVTGAFGFVTSLISCYQLL 226


>ref|NP_001235755.1| peroxisomal biogenesis factor 11 family protein [Glycine max]
           gi|218117595|dbj|BAH03205.1| peroxisomal biogenesis
           factor 11 family protein [Glycine max]
           gi|255632590|gb|ACU16645.1| unknown [Glycine max]
          Length = 235

 Score =  177 bits (450), Expect = 1e-42
 Identities = 89/118 (75%), Positives = 100/118 (84%), Gaps = 7/118 (5%)
 Frame = -1

Query: 618 RSGIYKNADRTQLIAKISLYCWMGSSVCTTLVEIGELGRLSASMKKLEKD-------KNE 460
           R+GIY+N +RT+LI +ISLYCW+GSSVCTTLVE+GELGRLS+SMKKLEKD        NE
Sbjct: 109 RTGIYQNKERTELIGRISLYCWLGSSVCTTLVELGELGRLSSSMKKLEKDLKNKNKYDNE 168

Query: 459 EYRTKLQKSNERTLSFVKAAIDIVVAAGLLQLAPKKITPRVTGAFGFTSSLISCYQLL 286
           +YR KL KSNERTLS +KA ID VVA GLLQLAPK +TPRVTGAFGF SSLISCYQLL
Sbjct: 169 QYRAKLNKSNERTLSLIKAGIDTVVAVGLLQLAPKTVTPRVTGAFGFVSSLISCYQLL 226


>ref|XP_002320762.1| predicted protein [Populus trichocarpa] gi|118489542|gb|ABK96573.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222861535|gb|EEE99077.1| predicted protein [Populus
           trichocarpa]
          Length = 235

 Score =  177 bits (450), Expect = 1e-42
 Identities = 88/118 (74%), Positives = 102/118 (86%), Gaps = 7/118 (5%)
 Frame = -1

Query: 618 RSGIYKNADRTQLIAKISLYCWMGSSVCTTLVEIGELGRLSASMKKLEKD-------KNE 460
           RSGIYKN +R +LI +ISL+CWMGSS+CTTLVE+GELGRLSASMKKLEK+        NE
Sbjct: 109 RSGIYKNKERVELIGRISLFCWMGSSICTTLVEVGELGRLSASMKKLEKELKEGEKNHNE 168

Query: 459 EYRTKLQKSNERTLSFVKAAIDIVVAAGLLQLAPKKITPRVTGAFGFTSSLISCYQLL 286
           +YR KL+KSNER+L+ VK+A+DIVVA GLLQLAPKK+TPRVTG FGF SSLISCYQLL
Sbjct: 169 QYRAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGGFGFVSSLISCYQLL 226


>gb|AFK46771.1| unknown [Lotus japonicus]
          Length = 235

 Score =  173 bits (439), Expect = 2e-41
 Identities = 87/118 (73%), Positives = 100/118 (84%), Gaps = 7/118 (5%)
 Frame = -1

Query: 618 RSGIYKNADRTQLIAKISLYCWMGSSVCTTLVEIGELGRLSASMKKLEKD-------KNE 460
           R+GI +N +RT+L+  ISL+CW+GSS CTTLVE+GELGRLS SMKKLEK+        NE
Sbjct: 109 RTGIIENKERTELLGPISLFCWLGSSACTTLVELGELGRLSTSMKKLEKELKNTNKYDNE 168

Query: 459 EYRTKLQKSNERTLSFVKAAIDIVVAAGLLQLAPKKITPRVTGAFGFTSSLISCYQLL 286
           +YR KLQKSNERTL+ VKA+IDIVVA GLLQLAPKK+TPRVTGAFGF SSLISCYQLL
Sbjct: 169 QYRAKLQKSNERTLALVKASIDIVVAVGLLQLAPKKVTPRVTGAFGFVSSLISCYQLL 226


>ref|XP_002301325.1| predicted protein [Populus trichocarpa] gi|118484040|gb|ABK93906.1|
           unknown [Populus trichocarpa]
           gi|222843051|gb|EEE80598.1| predicted protein [Populus
           trichocarpa]
          Length = 235

 Score =  173 bits (438), Expect = 3e-41
 Identities = 86/118 (72%), Positives = 100/118 (84%), Gaps = 7/118 (5%)
 Frame = -1

Query: 618 RSGIYKNADRTQLIAKISLYCWMGSSVCTTLVEIGELGRLSASMKKLEKD-------KNE 460
           RSGIYKN +R  LI +ISL+CWMGSS+CTTLVE+GELGRLS SMKKLEK+        NE
Sbjct: 109 RSGIYKNKERVDLIGRISLFCWMGSSICTTLVEVGELGRLSVSMKKLEKELKDGEKHHNE 168

Query: 459 EYRTKLQKSNERTLSFVKAAIDIVVAAGLLQLAPKKITPRVTGAFGFTSSLISCYQLL 286
           +YR KL+KSNER+L+ VK+A+DIVVA GLLQLAPKK+TPRVTGAFG  +SLISCYQLL
Sbjct: 169 QYRAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGVVTSLISCYQLL 226


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