BLASTX nr result

ID: Bupleurum21_contig00007567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007567
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera]   193   7e-47
ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265...   191   2e-46
ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259...   181   3e-43
emb|CBI16673.3| unnamed protein product [Vitis vinifera]              181   3e-43
gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana ...   177   4e-42

>emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera]
          Length = 363

 Score =  193 bits (491), Expect = 7e-47
 Identities = 121/287 (42%), Positives = 150/287 (52%)
 Frame = +1

Query: 151  NRDSAGNENSFDMSNNSFSGGYRQPEEGGTEKSYERRGYDXXXXXXXXXXXXXXXDFSNG 330
            NRDS  NE++ + +N+ FSGGYR  EEG T KS+ERRG                  FSNG
Sbjct: 92   NRDSFNNESTLN-NNDGFSGGYRPSEEGDTGKSFERRG--SGGPRSPYRGGGRRGGFSNG 148

Query: 331  EVADGERPRRVFERHSGTGRGHENLKRDGAGRANWGTPADDIIPDNEETVDAVEKNVDAE 510
            EV +GERPRR +ER SGTGRG+E +KRDGAGR NWGTPAD+I P+NEE ++  EKN  AE
Sbjct: 149  EVGEGERPRRAYERRSGTGRGNE-IKRDGAGRGNWGTPADEIAPENEEPINETEKNTSAE 207

Query: 511  KQGQENVEDDDNKEKSVAXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXRKVDLDK 690
            KQ  E +  D NKE  V                 Y                  RKVD+ K
Sbjct: 208  KQLGEEIAADANKENPVNESEEKEPEDKEMTLEEYQKVLEEKRKALLALKTEERKVDV-K 266

Query: 691  DFESMQLLSSKKNDEEIFVKLGSDXXXXXXXXXXXXXXXXXLSINEFLRPAXXXXXXXXX 870
            DFE+MQ LSSKK+++++F+KLGS+                 +SINEFL+PA         
Sbjct: 267  DFEAMQQLSSKKDNDDVFIKLGSEKDKRKELADKEERAKKSVSINEFLKPAEGERYYGGR 326

Query: 871  XXXXXXXXXXXXXXXXXYTGFGGRSTANNVPAPKIEDVKHFPSLGAK 1011
                               GF G +T +NV AP IED   FP+LG K
Sbjct: 327  GRGCGRGTRG---------GFAG-NTYSNVAAPSIEDPGQFPTLGGK 363


>ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265608 [Vitis vinifera]
            gi|296085734|emb|CBI29539.3| unnamed protein product
            [Vitis vinifera]
          Length = 363

 Score =  191 bits (486), Expect = 2e-46
 Identities = 121/287 (42%), Positives = 149/287 (51%)
 Frame = +1

Query: 151  NRDSAGNENSFDMSNNSFSGGYRQPEEGGTEKSYERRGYDXXXXXXXXXXXXXXXDFSNG 330
            NRDS  NE++ + +N+ FSGGYR  EEG T KS ERRG                  FSNG
Sbjct: 92   NRDSFNNESTLN-NNDGFSGGYRPSEEGDTGKSSERRG--SGGPRSPYRGGGRRGGFSNG 148

Query: 331  EVADGERPRRVFERHSGTGRGHENLKRDGAGRANWGTPADDIIPDNEETVDAVEKNVDAE 510
            EV +GERPRR +ER SGTGRG+E +KRDGAGR NWGTPAD+I P+NEE ++  EKN  AE
Sbjct: 149  EVGEGERPRRAYERRSGTGRGNE-IKRDGAGRGNWGTPADEIAPENEEPINETEKNTSAE 207

Query: 511  KQGQENVEDDDNKEKSVAXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXRKVDLDK 690
            KQ  E +  D NKE  V                 Y                  RKVD+ K
Sbjct: 208  KQLGEEIAADANKENPVNESEEKEPEDKEMTLEEYQKVLEEKRKALLALKTEERKVDV-K 266

Query: 691  DFESMQLLSSKKNDEEIFVKLGSDXXXXXXXXXXXXXXXXXLSINEFLRPAXXXXXXXXX 870
            DFE+MQ LSSKK+++++F+KLGS+                 +SINEFL+PA         
Sbjct: 267  DFEAMQQLSSKKDNDDVFIKLGSEKDKRKELADKEERAKKSVSINEFLKPAEGERYYGGR 326

Query: 871  XXXXXXXXXXXXXXXXXYTGFGGRSTANNVPAPKIEDVKHFPSLGAK 1011
                               GF G +T +NV AP IED   FP+LG K
Sbjct: 327  GRGRGRGTRG---------GFAG-NTYSNVAAPSIEDPGQFPTLGGK 363


>ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259885 [Vitis vinifera]
          Length = 370

 Score =  181 bits (459), Expect = 3e-43
 Identities = 123/315 (39%), Positives = 148/315 (46%), Gaps = 1/315 (0%)
 Frame = +1

Query: 70   VREGRNES-QXXXXXXXXXXXXXXXXQFNRDSAGNENSFDMSNNSFSGGYRQPEEGGTEK 246
            VREG+NES +                 FNRD A NENSF  SN   +GG   PE+G   K
Sbjct: 61   VREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSF--SNMGVAGGQGAPEDGEGGK 118

Query: 247  SYERRGYDXXXXXXXXXXXXXXXDFSNGEVADGERPRRVFERHSGTGRGHENLKRDGAGR 426
              ERR Y                 FSNGE  DG+RPRR FER SGTGRG+E LKR+G+GR
Sbjct: 119  PSERRNYGGPRPPFRGRRGG----FSNGEAGDGDRPRRAFERRSGTGRGNE-LKREGSGR 173

Query: 427  ANWGTPADDIIPDNEETVDAVEKNVDAEKQGQENVEDDDNKEKSVAXXXXXXXXXXXXXX 606
             NWGT  D++    EE V+  EKN+ AEK   E    D NKE  V               
Sbjct: 174  GNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEEKEMTL 233

Query: 607  XXYXXXXXXXXXXXXXXXXXXRKVDLDKDFESMQLLSSKKNDEEIFVKLGSDXXXXXXXX 786
              Y                  RKVD+DK+F+SMQ LSSKK +++IF+KLGSD        
Sbjct: 234  EEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGSDKDKRKEAA 293

Query: 787  XXXXXXXXXLSINEFLRPAXXXXXXXXXXXXXXXXXXXXXXXXXXYTGFGGRSTANNVPA 966
                     +SINEFL+PA                            G+GG +  +NV A
Sbjct: 294  EKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRG-------GYGGGNAMSNVAA 346

Query: 967  PKIEDVKHFPSLGAK 1011
            P IED   FP+LGAK
Sbjct: 347  PSIEDPGQFPTLGAK 361


>emb|CBI16673.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score =  181 bits (459), Expect = 3e-43
 Identities = 123/315 (39%), Positives = 148/315 (46%), Gaps = 1/315 (0%)
 Frame = +1

Query: 70   VREGRNES-QXXXXXXXXXXXXXXXXQFNRDSAGNENSFDMSNNSFSGGYRQPEEGGTEK 246
            VREG+NES +                 FNRD A NENSF  SN   +GG   PE+G   K
Sbjct: 61   VREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSF--SNMGVAGGQGAPEDGEGGK 118

Query: 247  SYERRGYDXXXXXXXXXXXXXXXDFSNGEVADGERPRRVFERHSGTGRGHENLKRDGAGR 426
              ERR Y                 FSNGE  DG+RPRR FER SGTGRG+E LKR+G+GR
Sbjct: 119  PSERRNYGGPRPPFRGRRGG----FSNGEAGDGDRPRRAFERRSGTGRGNE-LKREGSGR 173

Query: 427  ANWGTPADDIIPDNEETVDAVEKNVDAEKQGQENVEDDDNKEKSVAXXXXXXXXXXXXXX 606
             NWGT  D++    EE V+  EKN+ AEK   E    D NKE  V               
Sbjct: 174  GNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEEKEMTL 233

Query: 607  XXYXXXXXXXXXXXXXXXXXXRKVDLDKDFESMQLLSSKKNDEEIFVKLGSDXXXXXXXX 786
              Y                  RKVD+DK+F+SMQ LSSKK +++IF+KLGSD        
Sbjct: 234  EEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGSDKDKRKEAA 293

Query: 787  XXXXXXXXXLSINEFLRPAXXXXXXXXXXXXXXXXXXXXXXXXXXYTGFGGRSTANNVPA 966
                     +SINEFL+PA                            G+GG +  +NV A
Sbjct: 294  EKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRG-------GYGGGNAMSNVAA 346

Query: 967  PKIEDVKHFPSLGAK 1011
            P IED   FP+LGAK
Sbjct: 347  PSIEDPGQFPTLGAK 361


>gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana tabacum]
          Length = 299

 Score =  177 bits (450), Expect = 4e-42
 Identities = 118/291 (40%), Positives = 148/291 (50%), Gaps = 3/291 (1%)
 Frame = +1

Query: 148  FNRDSAGNENSFDMSNNSFSGGYRQPEEGGTEKSYERRGYDXXXXXXXXXXXXXXXDFSN 327
            FN++SA +EN+F  SNN FSG YR  E+G + K  ERRG                  F+N
Sbjct: 23   FNQESADDENAFG-SNNGFSGRYRVQEDGESGKLSERRG--GYGGPRGGFHGGRRGGFNN 79

Query: 328  GEVADGE--RPRRVFERHSGTGRGHENLKRDGAGRANWGTPADDIIPDNEETVDAVEKNV 501
            G+ A+GE  RPRRVF+R SGTGRG+E +KR+G+GR NWGTPADDI  + E  V+  EK V
Sbjct: 80   GDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADDIAQETEVPVNDGEKIV 139

Query: 502  DAEKQGQENVEDDDNKEKSVAXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXRKVD 681
            +AEK+  +   +D NK+ + A                Y                  RKV+
Sbjct: 140  EAEKEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLMEEKRKALLALKPEERKVN 199

Query: 682  LDKDFESMQLLSSKKNDEEIFVKLGSDXXXXXXXXXXXXXXXXXLSINEFLRPAXXXXXX 861
            LDK+ ESMQLLS+KKND+EIF+KLGS+                  SINEFL+PA      
Sbjct: 200  LDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAVEKARKTQ---SINEFLKPAEGENYS 256

Query: 862  XXXXXXXXXXXXXXXXXXXXYTGFGGRSTAN-NVPAPKIEDVKHFPSLGAK 1011
                                  GFGG    N +  AP IEDV  FPSL AK
Sbjct: 257  RRGGRGRGPGRGRG--------GFGGGVGGNKSFSAPSIEDVGQFPSLVAK 299


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