BLASTX nr result

ID: Bupleurum21_contig00007545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007545
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277295.1| PREDICTED: uncharacterized protein LOC100261...   378   e-102
ref|XP_002302850.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96
emb|CAN73938.1| hypothetical protein VITISV_031600 [Vitis vinifera]   356   7e-96
ref|XP_002528947.1| DNA binding protein, putative [Ricinus commu...   353   4e-95
ref|XP_002320497.1| predicted protein [Populus trichocarpa] gi|2...   341   2e-91

>ref|XP_002277295.1| PREDICTED: uncharacterized protein LOC100261969 [Vitis vinifera]
           gi|297739242|emb|CBI28893.3| unnamed protein product
           [Vitis vinifera]
          Length = 319

 Score =  378 bits (971), Expect = e-102
 Identities = 194/296 (65%), Positives = 236/296 (79%), Gaps = 2/296 (0%)
 Frame = +1

Query: 1   GLTGTIVLRSGRLSDIILQLQELTKGVNEPESSPG-YDGAFLAAQIRQLAQEIREMTTTN 177
           GLTG++VLRSGRLSD+I QLQEL KGVNE E SP  YD A LAAQIRQLAQEIRE+T +N
Sbjct: 19  GLTGSVVLRSGRLSDLIFQLQELLKGVNEVEISPQKYDTALLAAQIRQLAQEIRELTVSN 78

Query: 178 PVTIYTXXXXXXXXXXXXLMPAAALGAVGYCYMWWKGWSLSDVMFVTKHNMANAVATVSK 357
           PVT +             +MPAAALGA+GYCYMWWKG S SDVMFVTKHNMANAVATVSK
Sbjct: 79  PVTFFNGNSGSSGSYASYIMPAAALGAMGYCYMWWKGLSFSDVMFVTKHNMANAVATVSK 138

Query: 358 QLEHVSESLASTRKHLAKRLETLDWKMDEQKELSDIIASDVGEVRSNLNQIGFDIETIHQ 537
           QLEHVSE++ ST++HL+KRLE LDWK++EQKE S +IA+DV EV+S+L QIGFD+E I Q
Sbjct: 139 QLEHVSEAVVSTKRHLSKRLENLDWKLEEQKETSKLIANDVHEVKSDLFQIGFDVEMIQQ 198

Query: 538 MVSGLEGQIELLESKQDVTNAGLWYLCQ-AAGGIKDGTNSKPFLDVGAKIKEHSSIAYND 714
           MVSGLEG++ELLESKQD+TN+GLWYLCQ AAGGIKDG N+K F DVG +I +HS++ Y +
Sbjct: 199 MVSGLEGKLELLESKQDMTNSGLWYLCQAAAGGIKDGLNAKLFQDVGDRIPDHSAVTYEN 258

Query: 715 KLPKGLSLFAESSDELSTQKVIIGAKKSIHPDNPVKAFSTVRTRIHRSYPVSLSAT 882
            L KGL   A++++  + +K  I +K++   D PVK  STV+TRIHR+YPV +S T
Sbjct: 259 SL-KGLQFIADTNESSTIKKSGISSKETNPNDGPVKKMSTVKTRIHRAYPVGISLT 313


>ref|XP_002302850.1| predicted protein [Populus trichocarpa] gi|222844576|gb|EEE82123.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  357 bits (916), Expect = 3e-96
 Identities = 181/304 (59%), Positives = 231/304 (75%), Gaps = 3/304 (0%)
 Frame = +1

Query: 1   GLTGTIVLRSGRLSDIILQLQELTKGVNEPESSP-GYDGAFLAAQIRQLAQEIREMTTTN 177
           GLT +I+L++GRLS++I QLQEL KGV++ E +P  YD A LAAQIRQLAQEI+E+T ++
Sbjct: 19  GLTSSIILKNGRLSELIGQLQELLKGVDQVEIAPYKYDSALLAAQIRQLAQEIKELTLSS 78

Query: 178 PVTIYTXXXXXXXXXXXXLMPAAALGAVGYCYMWWKGWSLSDVMFVTKHNMANAVATVSK 357
           PVTIY             L+PAAALGA+GYCYMWWK WS SDVMFVTK NMANAVATVSK
Sbjct: 79  PVTIYNGNSASSGSFSSYLVPAAALGAMGYCYMWWKDWSFSDVMFVTKKNMANAVATVSK 138

Query: 358 QLEHVSESLASTRKHLAKRLETLDWKMDEQKELSDIIASDVGEVRSNLNQIGFDIETIHQ 537
           Q+E+VSE+LAST++HL KRLE LDWK++EQ E S +IASDV E++SNL+QIG+D+E+IHQ
Sbjct: 139 QMENVSETLASTKRHLTKRLENLDWKIEEQIETSKLIASDVDEMKSNLSQIGYDVESIHQ 198

Query: 538 MVSGLEGQIELLESKQDVTNAGLWYLCQAAGGIKDGTNSKPFLDVGAKIKEHSSIAYNDK 717
           M+SGLEG++ELLESKQD TN+GLW+LCQ AGG KDG  ++ + DVGAK+    ++AY ++
Sbjct: 199 MISGLEGKLELLESKQDTTNSGLWHLCQFAGGFKDGLGTQVYQDVGAKLANPPAMAYEER 258

Query: 718 LPKGLSLFAESSDELSTQKVIIGAKKSIH--PDNPVKAFSTVRTRIHRSYPVSLSATLDI 891
             KGL   AE+ +    +K +   K  +H  P   VK   TV+TR+HRSYPV  S T DI
Sbjct: 259 SLKGLQFIAETKESDKVEKPVENVKNDLHIYPGEKVK---TVKTRVHRSYPVGFSLTRDI 315

Query: 892 LG*G 903
           +G G
Sbjct: 316 VGSG 319


>emb|CAN73938.1| hypothetical protein VITISV_031600 [Vitis vinifera]
          Length = 358

 Score =  356 bits (913), Expect = 7e-96
 Identities = 192/332 (57%), Positives = 234/332 (70%), Gaps = 40/332 (12%)
 Frame = +1

Query: 1    GLTGTIVLRSGRLSDIILQLQELTKGVNEPESSPG-YDGAFLAAQ--------------- 132
            GLTG++VLRSGRLSD+I QLQEL KGVNE E SP  YD A LAAQ               
Sbjct: 19   GLTGSVVLRSGRLSDLIFQLQELLKGVNEVEISPQKYDTALLAAQLYCYSFMLFILMMVV 78

Query: 133  -----------IRQLAQEIREMTTTNPVTIYTXXXXXXXXXXXXLMPAAALGAVGYCYMW 279
                       IRQLAQEIRE+T +NPVT +             +MPAAALGA+GYCYMW
Sbjct: 79   DIHGHTFMCPQIRQLAQEIRELTVSNPVTFFNGNSGSSGSYASYIMPAAALGAMGYCYMW 138

Query: 280  WK------------GWSLSDVMFVTKHNMANAVATVSKQLEHVSESLASTRKHLAKRLET 423
            WK            G S SDVMFVTKHNMANAVATVSKQLEHVSE++ ST++HL+KRLE 
Sbjct: 139  WKARFTYDFKIYRLGLSFSDVMFVTKHNMANAVATVSKQLEHVSEAVVSTKRHLSKRLEN 198

Query: 424  LDWKMDEQKELSDIIASDVGEVRSNLNQIGFDIETIHQMVSGLEGQIELLESKQDVTNAG 603
            LDWK++EQKE S +IA+DV EV+S+L QIGFD+E I QMVSGLEG++ELLESKQD+TN+G
Sbjct: 199  LDWKLEEQKETSKLIANDVHEVKSDLXQIGFDVEMIQQMVSGLEGKLELLESKQDMTNSG 258

Query: 604  LWYLCQ-AAGGIKDGTNSKPFLDVGAKIKEHSSIAYNDKLPKGLSLFAESSDELSTQKVI 780
            LWYLCQ AAGGIKDG N+K F DVG +I +HS++ Y +   KGL   A++++  + +K  
Sbjct: 259  LWYLCQAAAGGIKDGLNAKLFQDVGDRIPDHSAVTYEENSLKGLQFIADTNESSTIKKSG 318

Query: 781  IGAKKSIHPDNPVKAFSTVRTRIHRSYPVSLS 876
            I +K++   D PVK  STV+TRIHR+YPV +S
Sbjct: 319  ISSKETNPNDGPVKKMSTVKTRIHRAYPVGIS 350


>ref|XP_002528947.1| DNA binding protein, putative [Ricinus communis]
           gi|223531593|gb|EEF33421.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 321

 Score =  353 bits (907), Expect = 4e-95
 Identities = 184/302 (60%), Positives = 227/302 (75%), Gaps = 1/302 (0%)
 Frame = +1

Query: 1   GLTGTIVLRSGRLSDIILQLQELTKGVNEPESSP-GYDGAFLAAQIRQLAQEIREMTTTN 177
           GLTG+I+L +GRLS+++ QL EL KGVNE E SP  YD A LAAQIRQLAQEI+E+T +N
Sbjct: 19  GLTGSIILNNGRLSELLAQLHELLKGVNEVEISPYKYDSALLAAQIRQLAQEIKELTFSN 78

Query: 178 PVTIYTXXXXXXXXXXXXLMPAAALGAVGYCYMWWKGWSLSDVMFVTKHNMANAVATVSK 357
           PVTIY             L+PAAALGA+GYCYMWWKG S SDVMFVTK NMANAVATVSK
Sbjct: 79  PVTIYNGNSSSSGGFASYLVPAAALGAMGYCYMWWKGLSFSDVMFVTKKNMANAVATVSK 138

Query: 358 QLEHVSESLASTRKHLAKRLETLDWKMDEQKELSDIIASDVGEVRSNLNQIGFDIETIHQ 537
           QL++VSE+LAST++HL KRLE LDWKM+EQ E S +IA+DV E+++NL+QIGFD+E I Q
Sbjct: 139 QLDNVSETLASTKRHLTKRLENLDWKMEEQIETSKLIANDVDEMKTNLSQIGFDVEMIQQ 198

Query: 538 MVSGLEGQIELLESKQDVTNAGLWYLCQAAGGIKDGTNSKPFLDVGAKIKEHSSIAYNDK 717
           M+SGLEG++ELLESKQD+TN+GL YLCQ A G KDG  +    DVGAK+  HS+I Y ++
Sbjct: 199 MISGLEGKLELLESKQDITNSGLSYLCQFAEGFKDGHGAPFIQDVGAKVANHSTITYEER 258

Query: 718 LPKGLSLFAESSDELSTQKVIIGAKKSIHPDNPVKAFSTVRTRIHRSYPVSLSATLDILG 897
             KGL   AES++  +  K +   KKS   + P +   T++ RIHRSYPV LS T D+LG
Sbjct: 259 SLKGLLFSAESAELNTIDKSVEHVKKSEVENLPSEKIKTMKPRIHRSYPVGLSLTRDLLG 318

Query: 898 *G 903
            G
Sbjct: 319 SG 320


>ref|XP_002320497.1| predicted protein [Populus trichocarpa] gi|222861270|gb|EEE98812.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  341 bits (875), Expect = 2e-91
 Identities = 179/309 (57%), Positives = 229/309 (74%), Gaps = 8/309 (2%)
 Frame = +1

Query: 1   GLTGTIVLRSGRLSDIILQLQELTKGVNEPESSP-GYDGAFLAAQIRQLAQEIREMTTTN 177
           GLT +I+L++GRL ++I QLQEL KGV+E E +P  YD A LAAQIRQLAQEI+E++ ++
Sbjct: 19  GLTSSIILKNGRLPELIGQLQELLKGVDEVEIAPYKYDTALLAAQIRQLAQEIKELSLSS 78

Query: 178 PVTIYTXXXXXXXXXXXXLMPAAALGAVGYCYMWWK-------GWSLSDVMFVTKHNMAN 336
           PVTIY             L+PAAALGA+GYCY WWK       GWS SDVMFVTK NMAN
Sbjct: 79  PVTIYNGNSVSNGNFSSYLVPAAALGAMGYCYFWWKARFLMLKGWSFSDVMFVTKQNMAN 138

Query: 337 AVATVSKQLEHVSESLASTRKHLAKRLETLDWKMDEQKELSDIIASDVGEVRSNLNQIGF 516
           AVATVSKQLE+VSE+LAST++HL KRL  LDWK++EQ E S +IA+D+ E++SNL+QIG+
Sbjct: 139 AVATVSKQLENVSETLASTKRHLTKRLGNLDWKIEEQIETSKLIANDIDEMKSNLSQIGY 198

Query: 517 DIETIHQMVSGLEGQIELLESKQDVTNAGLWYLCQAAGGIKDGTNSKPFLDVGAKIKEHS 696
           D+E+IH+M+SGLEG++ELLESKQD TN+GLWYLCQ AGG KDG  +K + DVGAK+  HS
Sbjct: 199 DVESIHEMISGLEGKLELLESKQDATNSGLWYLCQFAGGFKDGPGTKAYQDVGAKLANHS 258

Query: 697 SIAYNDKLPKGLSLFAESSDELSTQKVIIGAKKSIHPDNPVKAFSTVRTRIHRSYPVSLS 876
           ++AY ++  KGL   AE+ +  S +K +  AKK+     P +   T+  +IHRSYP   S
Sbjct: 259 AMAYEERSLKGLQFIAETKE--SVEKPVENAKKNDLDTFPGEKARTL--KIHRSYPGGFS 314

Query: 877 ATLDILG*G 903
            T DILG G
Sbjct: 315 LTRDILGSG 323


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