BLASTX nr result

ID: Bupleurum21_contig00007488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007488
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precu...    95   2e-17
emb|CBI30669.3| unnamed protein product [Vitis vinifera]               94   3e-17
ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro...    94   3e-17
emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]    93   9e-17
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...    89   1e-15

>ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus
           communis] gi|223538249|gb|EEF39858.1| 50S ribosomal
           protein L34, chloroplast precursor, putative [Ricinus
           communis]
          Length = 161

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 47/63 (74%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 GLALGLNFNTGTRIEKSRG--LVVRAGKAALCQTKRNRSRKSLARTHGFRKRMSTTSGRA 11
           GL+LGL+ N+ T + K RG  LVVRAGKAALCQTKRNRSRKSLARTHGFR+RM TTSGRA
Sbjct: 77  GLSLGLDLNSSTGVRKGRGYGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRA 136

Query: 10  IIR 2
           +++
Sbjct: 137 VLK 139


>emb|CBI30669.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 47/63 (74%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 GLALGLNFNT--GTRIEKSRGLVVRAGKAALCQTKRNRSRKSLARTHGFRKRMSTTSGRA 11
           GL+LGL+ N+  G R E+  GLVVRAGKAALCQTKRNRSRKSLARTHGFR+RM TTSGRA
Sbjct: 29  GLSLGLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRA 88

Query: 10  IIR 2
           +++
Sbjct: 89  VLK 91


>ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis
           vinifera]
          Length = 148

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 47/63 (74%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 GLALGLNFNT--GTRIEKSRGLVVRAGKAALCQTKRNRSRKSLARTHGFRKRMSTTSGRA 11
           GL+LGL+ N+  G R E+  GLVVRAGKAALCQTKRNRSRKSLARTHGFR+RM TTSGRA
Sbjct: 64  GLSLGLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRA 123

Query: 10  IIR 2
           +++
Sbjct: 124 VLK 126


>emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]
          Length = 148

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 45/60 (75%), Positives = 51/60 (85%)
 Frame = -2

Query: 181 LALGLNFNTGTRIEKSRGLVVRAGKAALCQTKRNRSRKSLARTHGFRKRMSTTSGRAIIR 2
           L L LN + G R E+  GLVVRAGKAALCQTKRNRSRKSLARTHGFR+RM TTSGRA+++
Sbjct: 67  LGLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLK 126


>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 45/63 (71%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
 Frame = -2

Query: 184 GLALGLNFNT--GTRIEKSRGLVVRAGKAALCQTKRNRSRKSLARTHGFRKRMSTTSGRA 11
           GL+LGL++++  G    K RGLVVRAGKAALCQTKRNRSRKSLARTHGFR+RM TT+GRA
Sbjct: 71  GLSLGLDWSSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRA 130

Query: 10  IIR 2
           +++
Sbjct: 131 VLK 133


Top