BLASTX nr result

ID: Bupleurum21_contig00007487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007487
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase ac...   495   e-138
ref|XP_002524807.1| zinc ion binding protein, putative [Ricinus ...   481   e-133
ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase ac...   468   e-130
ref|XP_004136066.1| PREDICTED: mitochondrial ubiquitin ligase ac...   467   e-129
ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase ac...   467   e-129

>ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|296086688|emb|CBI32323.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  495 bits (1275), Expect = e-138
 Identities = 230/285 (80%), Positives = 256/285 (89%)
 Frame = -1

Query: 896 ISGRVCSDTPISCEYSGMRGVIVEETAEQHFLKHNDAGSWVQDSATMLSMCKEVPWYLDD 717
           +SGRV SDTPI CEYSG+RGVIVEETAEQHFLKHNDAGSW+QDSA MLSM KEVPWYLDD
Sbjct: 59  VSGRVGSDTPIKCEYSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDD 118

Query: 716 GTSRVFVIGARAASGLALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRTERVLPVGTP 537
            T R +++GAR A+GL LTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKR ERVLP GTP
Sbjct: 119 DTGRAYIVGARGATGLVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGTP 178

Query: 536 LTVVGEAVKDDIGTIRIQKPHKGPFYVSPKTIDQLIANLGKWARWYKYASLGFQVFGIYL 357
           LTVVGEA+KDD+GTIRIQ+PHKGPFYVSPK+ID L+ANLGKWARWY+YASLGF VFG+YL
Sbjct: 179 LTVVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDHLVANLGKWARWYRYASLGFTVFGVYL 238

Query: 356 IARRCFQYIMERKRHWEIRKRVLDAAAKRQGSDIEGTNTNSDDGLDSTKKDRLMPNLCVI 177
           IA+   QY+MERKR WE+RKRVL AA+K+ G D E  +   ++G D+TK+DRLMP+LCVI
Sbjct: 239 IAKSAIQYVMERKRCWELRKRVLAAASKKSGQDSEDPDEKDENGSDNTKRDRLMPDLCVI 298

Query: 176 CLEQEYNSVFVPCGHMCCCTSCSSHLTNCPLCRRRIEQVVRTFRH 42
           CLEQEYN+VFVPCGHMCCCT CSS LTNCPLCRRRIEQVVRTFRH
Sbjct: 299 CLEQEYNAVFVPCGHMCCCTMCSSQLTNCPLCRRRIEQVVRTFRH 343


>ref|XP_002524807.1| zinc ion binding protein, putative [Ricinus communis]
           gi|223535991|gb|EEF37650.1| zinc ion binding protein,
           putative [Ricinus communis]
          Length = 363

 Score =  481 bits (1237), Expect = e-133
 Identities = 222/279 (79%), Positives = 254/279 (91%)
 Frame = -1

Query: 896 ISGRVCSDTPISCEYSGMRGVIVEETAEQHFLKHNDAGSWVQDSATMLSMCKEVPWYLDD 717
           ISGRV S+TPI+CEYSG+RGVIVEETAEQHFLKHNDAGSW+QDSA MLSM KEVPWYLDD
Sbjct: 49  ISGRVGSETPINCEYSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDD 108

Query: 716 GTSRVFVIGARAASGLALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRTERVLPVGTP 537
           GT R FV+GAR ASG ALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKR ERVLP GT 
Sbjct: 109 GTDRTFVVGARGASGFALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGTS 168

Query: 536 LTVVGEAVKDDIGTIRIQKPHKGPFYVSPKTIDQLIANLGKWARWYKYASLGFQVFGIYL 357
           L+V+GEAVKDDIGT+RIQ+PHKGPFYVSPKTID+LI NLGKWARWY+YAS+G  VFG++L
Sbjct: 169 LSVIGEAVKDDIGTVRIQRPHKGPFYVSPKTIDELIGNLGKWARWYRYASVGLTVFGVFL 228

Query: 356 IARRCFQYIMERKRHWEIRKRVLDAAAKRQGSDIEGTNTNSDDGLDSTKKDRLMPNLCVI 177
           IA+   QYIMER+R WE++ RVL AAAKRQG D +G+N  +++G DS+K++R +P+LCVI
Sbjct: 229 IAKHAIQYIMERRRRWELQSRVLAAAAKRQGQDSDGSNGKAENGSDSSKRERPIPDLCVI 288

Query: 176 CLEQEYNSVFVPCGHMCCCTSCSSHLTNCPLCRRRIEQV 60
           CLEQEYN+VF+PCGHMCCCT+CSSHLTNCPLCRRRIEQ+
Sbjct: 289 CLEQEYNAVFLPCGHMCCCTACSSHLTNCPLCRRRIEQI 327


>ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1-like
           [Glycine max]
          Length = 339

 Score =  468 bits (1204), Expect = e-130
 Identities = 224/286 (78%), Positives = 250/286 (87%), Gaps = 1/286 (0%)
 Frame = -1

Query: 896 ISGRVCSDTPISCEYSGMRGVIVEETAEQHFLKHNDAGSWVQDSATMLSMCKEVPWYLDD 717
           ISGRV S+TPI+CE+SG+RGVIVEETAEQHFLKHNDAGSW+QDSA MLSM KEVPWYLDD
Sbjct: 57  ISGRVSSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDD 116

Query: 716 GTSRVFVIGARAASGLALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRTERVLPVGTP 537
           GT RV V+GAR A+G AL VGSE FEESGRSLVRGTLDYLQGLKMLGVKR ERVLPVGT 
Sbjct: 117 GTDRVHVVGARGAAGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTS 176

Query: 536 LTVVGEAVKDDIGTIRIQKPHKGPFYVSPKTIDQLIANLGKWARWYKYASLGFQVFGIYL 357
           LTVVGEA KDD+G  RIQ+PHKGPFYVSPKTIDQLIANLGKWARWYKYAS+G  VFG YL
Sbjct: 177 LTVVGEAAKDDVGAFRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYL 236

Query: 356 IARRCFQYIMERKRHWEIRKRVLDAAAKRQGSDIEGTNTNSDDGL-DSTKKDRLMPNLCV 180
           IA+   +YI+ER+R  E+++RVL AAAK+ G   +  +    DGL D  KKDRLMP+LCV
Sbjct: 237 IAKHAIRYILERRRRSELQRRVLAAAAKKSG---QNNDVEKADGLSDGVKKDRLMPDLCV 293

Query: 179 ICLEQEYNSVFVPCGHMCCCTSCSSHLTNCPLCRRRIEQVVRTFRH 42
           ICLEQEYN+VFVPCGHMCCCT+CSSHLTNCPLCRR+IE+VV+TFRH
Sbjct: 294 ICLEQEYNAVFVPCGHMCCCTTCSSHLTNCPLCRRQIEKVVKTFRH 339


>ref|XP_004136066.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Cucumis sativus]
          Length = 342

 Score =  467 bits (1202), Expect = e-129
 Identities = 218/285 (76%), Positives = 246/285 (86%)
 Frame = -1

Query: 896 ISGRVCSDTPISCEYSGMRGVIVEETAEQHFLKHNDAGSWVQDSATMLSMCKEVPWYLDD 717
           ISGRV SDTPI+CE+SG+RGVIVEETAEQHFLKHNDAGSW+QDSA MLSM KEVPWYLDD
Sbjct: 58  ISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDD 117

Query: 716 GTSRVFVIGARAASGLALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRTERVLPVGTP 537
           GT R FV+GAR A+   L V SEVFEESGRSL+RGTLDYLQGLKMLGVKR ERVLP GT 
Sbjct: 118 GTGRAFVLGARNATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTS 177

Query: 536 LTVVGEAVKDDIGTIRIQKPHKGPFYVSPKTIDQLIANLGKWARWYKYASLGFQVFGIYL 357
           LTVVGEA KDDIGTIRIQ+PHKGPFYVSPKTIDQLI+NLGKWARWYKYAS+G  +FG+YL
Sbjct: 178 LTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASMGLSIFGLYL 237

Query: 356 IARRCFQYIMERKRHWEIRKRVLDAAAKRQGSDIEGTNTNSDDGLDSTKKDRLMPNLCVI 177
           + +    Y+MER+R WE++KRVL AAAKR   + EG    + +G D TK+DR MP+LCVI
Sbjct: 238 VTKHVILYLMERRRRWELQKRVLAAAAKRSSQENEGEIEKASNGTDGTKRDRSMPDLCVI 297

Query: 176 CLEQEYNSVFVPCGHMCCCTSCSSHLTNCPLCRRRIEQVVRTFRH 42
           CLE++YN+VFVPCGHMCCC +C SHLTNCPLCRRRIE VV+TFRH
Sbjct: 298 CLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTFRH 342


>ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           isoform 1 [Glycine max]
          Length = 339

 Score =  467 bits (1201), Expect = e-129
 Identities = 225/287 (78%), Positives = 251/287 (87%), Gaps = 2/287 (0%)
 Frame = -1

Query: 896 ISGRVCSDTPISCEYSGMRGVIVEETAEQHFLKHNDAGSWVQDSATMLSMCKEVPWYLDD 717
           ISGRV S+TPI+CE+SG+RGVIVEETAEQHFLKHNDAGSW+QDSA MLSM KEVPWYLDD
Sbjct: 57  ISGRVSSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDD 116

Query: 716 GTSRVFVIGARAASGLALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRTERVLPVGTP 537
           GT RV V+GAR ASG AL VG E FEESGRSLVRGTLDYLQGLKMLGVKR ERVLPVGT 
Sbjct: 117 GTDRVHVVGARGASGFALPVGIEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTS 176

Query: 536 LTVVGEAVKDDIGTIRIQKPHKGPFYVSPKTIDQLIANLGKWARWYKYASLGFQVFGIYL 357
           LTVVGEA KDD+G IRIQ+PHKGPFYVSPKTIDQLIANLGKWARWYKYAS+G  VFG YL
Sbjct: 177 LTVVGEAAKDDVGAIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTVFGAYL 236

Query: 356 IARRCFQYIMERKRHWEIRKRVLDAAAKRQG--SDIEGTNTNSDDGLDSTKKDRLMPNLC 183
           IA+   +YI+ER+R  E+++RVL AAAK+ G  +D+E     +D   D  KKDRLMP+LC
Sbjct: 237 IAKHAIRYILERRRRSELQRRVLAAAAKKSGQNNDVE----KADSLSDGAKKDRLMPDLC 292

Query: 182 VICLEQEYNSVFVPCGHMCCCTSCSSHLTNCPLCRRRIEQVVRTFRH 42
           VICLEQEYN+VFVPCGHMCCCT+CSSHLTNCPLCRR+IE+VV+TFRH
Sbjct: 293 VICLEQEYNAVFVPCGHMCCCTACSSHLTNCPLCRRQIEKVVKTFRH 339


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