BLASTX nr result

ID: Bupleurum21_contig00007478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007478
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36576.1| ARF domain class transcription factor [Malus x do...    85   7e-15
ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vit...    84   9e-15
emb|CBI30950.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vit...    84   2e-14
ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin respon...    82   3e-14

>gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
          Length = 895

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
 Frame = -3

Query: 295 EDLGMNSPLMWLRGDNGGRGFQSLNFQGNGVTPWMQPGIDASMLNXXXXXXXXXXXXXXX 116
           +DLGMNS L+WL+G+NG RG QSLNF G GVTPWMQP +DASM+                
Sbjct: 390 DDLGMNSQLVWLQGNNGDRGMQSLNFPGMGVTPWMQPRLDASMIG-LQSDMYQAMAAAAL 448

Query: 115 XXXXAVDTSRHLNPLAGQFQQTEGVPNS--STSLLHTQML 2
               AVD SR L     QFQQ + +PNS  S +L+  QM+
Sbjct: 449 QEMRAVDPSRPLPTSLLQFQQPQSLPNSNRSAALMQPQMV 488


>ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 891

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/97 (48%), Positives = 56/97 (57%)
 Frame = -3

Query: 292 DLGMNSPLMWLRGDNGGRGFQSLNFQGNGVTPWMQPGIDASMLNXXXXXXXXXXXXXXXX 113
           D+ +NSPLMWLRGD G +G QSLNFQG G+TPWMQP +DASML                 
Sbjct: 392 DMSINSPLMWLRGDIGDQGIQSLNFQGYGLTPWMQPRLDASMLG-LQSNMQQAIAAASLQ 450

Query: 112 XXXAVDTSRHLNPLAGQFQQTEGVPNSSTSLLHTQML 2
              A+D S+H      QFQQ + V NS  S+   QML
Sbjct: 451 ELRALDPSKHPAQSLLQFQQPQNVSNSPASVFRGQML 487


>emb|CBI30950.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/98 (47%), Positives = 56/98 (57%)
 Frame = -3

Query: 295 EDLGMNSPLMWLRGDNGGRGFQSLNFQGNGVTPWMQPGIDASMLNXXXXXXXXXXXXXXX 116
           +DLGMNSPLMWLRGDN  RG QSLNFQG GV PWMQP +DASML                
Sbjct: 390 DDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASMLG-LQTDMYQAMAAAAL 448

Query: 115 XXXXAVDTSRHLNPLAGQFQQTEGVPNSSTSLLHTQML 2
               AVD S+        +QQ + V + S+ ++  QML
Sbjct: 449 QEMRAVDPSKQAPAPLLHYQQPQNVASRSSCIMQPQML 486


>ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 908

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/98 (47%), Positives = 56/98 (57%)
 Frame = -3

Query: 295 EDLGMNSPLMWLRGDNGGRGFQSLNFQGNGVTPWMQPGIDASMLNXXXXXXXXXXXXXXX 116
           +DLGMNSPLMWLRGDN  RG QSLNFQG GV PWMQP +DASML                
Sbjct: 390 DDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASMLG-LQTDMYQAMAAAAL 448

Query: 115 XXXXAVDTSRHLNPLAGQFQQTEGVPNSSTSLLHTQML 2
               AVD S+        +QQ + V + S+ ++  QML
Sbjct: 449 QEMRAVDPSKQAPAPLLHYQQPQNVASRSSCIMQPQML 486


>ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
           partial [Cucumis sativus]
          Length = 884

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/97 (46%), Positives = 55/97 (56%)
 Frame = -3

Query: 292 DLGMNSPLMWLRGDNGGRGFQSLNFQGNGVTPWMQPGIDASMLNXXXXXXXXXXXXXXXX 113
           DLGMNSP MWLRGDN  RG Q LNFQG GV+PWMQP +D SM+                 
Sbjct: 375 DLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMMG-MQSDMYQVMATAALQ 433

Query: 112 XXXAVDTSRHLNPLAGQFQQTEGVPNSSTSLLHTQML 2
              A+D S+       QFQQ + +P  S++L+  QML
Sbjct: 434 EMRAIDYSKISPASVLQFQQPQSLPCQSSTLMQPQML 470


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