BLASTX nr result

ID: Bupleurum21_contig00007453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007453
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256...   533   e-149
emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]   532   e-148
ref|XP_002530111.1| DNA-3-methyladenine glycosylase, putative [R...   492   e-137
ref|XP_003531474.1| PREDICTED: probable GMP synthase [glutamine-...   478   e-132
ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|2...   472   e-130

>ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256507 [Vitis vinifera]
            gi|297738175|emb|CBI27376.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  533 bits (1372), Expect = e-149
 Identities = 275/402 (68%), Positives = 316/402 (78%), Gaps = 9/402 (2%)
 Frame = -1

Query: 1282 MCSSKLKLQE----TAGSLDINGRPVLQPTCNRVPLLERRNSLKKNTTKSVTTP-PKIQP 1118
            MCSSK KL +    T     INGRP LQPTCNR+P LER +S KK + KS T+P P   P
Sbjct: 1    MCSSKSKLHQGIDITPSKAQINGRPALQPTCNRIPSLERHHSFKKISPKSPTSPLPASPP 60

Query: 1117 LPSRISXXXXXTNISPKVRPSVITPPISPKLKSPRQPAIKRGNDPNGLSSSTEKVVLTPR 938
             P+ I         + K +PS +TPP SP LKSPRQPA+KRGNDPNGL+SS EKV LTPR
Sbjct: 61   PPTTIIN-------TTKTKPS-LTPPASPNLKSPRQPALKRGNDPNGLNSSLEKV-LTPR 111

Query: 937  STNKVVTPVKKSKNC----APSVDTTALNYSSSSIVEAPGSIAAARREQVANMQVQRKMK 770
             T K  +  KK+K C    APS DT++LNYSSS IVEAPGSIAAARREQ+A MQVQRKM+
Sbjct: 112  GTTKSSSSPKKTKKCSAGLAPSSDTSSLNYSSSLIVEAPGSIAAARREQMAIMQVQRKMR 171

Query: 769  IAHYGRTKSARFESTVVPLDEAATTAPEEKRCSFITPNSDPIYVAYHDEEWGVPAHDDRL 590
            IAHYGRTKSA++E  + P+D    T  EEKRCSFITPNSDP YV YHDEEWGVP HDD+ 
Sbjct: 172  IAHYGRTKSAKYEEKIGPVDPLVITTREEKRCSFITPNSDPSYVEYHDEEWGVPVHDDKR 231

Query: 589  LFELLVLTGAQVGSDWTSVLKKRQEFRDAFSDFDPETVSKYSEKKITSISTKYSIAMSQV 410
            LFELLV+TGAQVGSDWT+VLKKRQE+RDA S +D E V K+SEKKITSIS  Y I +SQV
Sbjct: 232  LFELLVMTGAQVGSDWTTVLKKRQEYRDALSGYDAEIVGKFSEKKITSISAYYGIDLSQV 291

Query: 409  RGIVDNSIRILQIKKDFGSFDKYLWGFVNHKPIVTQYKSSHKMPVKTSKSEGISKDMVKK 230
            RG+VDNS RIL+IK++FGSF KY+WGFVNHKPI TQYKS HK+PVKTSKSE ISKDMV++
Sbjct: 292  RGVVDNSNRILEIKREFGSFHKYIWGFVNHKPITTQYKSCHKIPVKTSKSESISKDMVRR 351

Query: 229  GFRLVGPTVIHSFMQAAGLTNDHLTTCPQHLQCLAFASQNGA 104
            GFRLVGPTVI+SFMQAAGLTNDHL +CP+HLQC+A +S   A
Sbjct: 352  GFRLVGPTVIYSFMQAAGLTNDHLISCPRHLQCIALSSHQPA 393


>emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]
          Length = 398

 Score =  532 bits (1370), Expect = e-148
 Identities = 274/401 (68%), Positives = 316/401 (78%), Gaps = 8/401 (1%)
 Frame = -1

Query: 1282 MCSSKLKLQE----TAGSLDINGRPVLQPTCNRVPLLERRNSLKKNTTKSVTTPPKIQPL 1115
            MCSSK KL +    T     INGRP LQPTCNR+P LER +S KK + KS T+P     L
Sbjct: 1    MCSSKSKLHQGIDITPSKAQINGRPALQPTCNRIPSLERHHSFKKISPKSPTSP-----L 55

Query: 1114 PSRISXXXXXTNISPKVRPSVITPPISPKLKSPRQPAIKRGNDPNGLSSSTEKVVLTPRS 935
            P+ +       N + K +PS +TPP SP LKSPRQPA+KRGNDPNGL+SS EKV LTPR 
Sbjct: 56   PASLPPPTTIINTT-KTKPS-LTPPASPNLKSPRQPALKRGNDPNGLNSSLEKV-LTPRG 112

Query: 934  TNKVVTPVKKSKNC----APSVDTTALNYSSSSIVEAPGSIAAARREQVANMQVQRKMKI 767
            T K  +  KK+K C    APS DT++LNYSSS IVEAPGSIAAARREQ+A MQVQRKM+I
Sbjct: 113  TTKSSSSPKKTKKCSAGLAPSSDTSSLNYSSSFIVEAPGSIAAARREQMAIMQVQRKMRI 172

Query: 766  AHYGRTKSARFESTVVPLDEAATTAPEEKRCSFITPNSDPIYVAYHDEEWGVPAHDDRLL 587
            AHYGRTKSA++E  + P+D    T  EEKRCSFITPNSDP YV YHDEEWGVP HDD+ L
Sbjct: 173  AHYGRTKSAKYEEKISPVDPLVITTREEKRCSFITPNSDPSYVEYHDEEWGVPVHDDKRL 232

Query: 586  FELLVLTGAQVGSDWTSVLKKRQEFRDAFSDFDPETVSKYSEKKITSISTKYSIAMSQVR 407
            FELLV+TGAQVGSDWT+VLKKRQE+RDAFS +D E V K+SEKKITSIS  Y I +SQVR
Sbjct: 233  FELLVMTGAQVGSDWTTVLKKRQEYRDAFSGYDAEIVGKFSEKKITSISAYYGIDLSQVR 292

Query: 406  GIVDNSIRILQIKKDFGSFDKYLWGFVNHKPIVTQYKSSHKMPVKTSKSEGISKDMVKKG 227
            G+VDNS RIL+IK++FGSF KY+WGFVNHKPI TQ KS HK+PVKTSKSE ISKDMV++G
Sbjct: 293  GVVDNSNRILEIKREFGSFHKYIWGFVNHKPITTQXKSCHKIPVKTSKSESISKDMVRRG 352

Query: 226  FRLVGPTVIHSFMQAAGLTNDHLTTCPQHLQCLAFASQNGA 104
            FRLVGPTVI+SFMQAAGLTNDHL +CP+HLQC+A +S   A
Sbjct: 353  FRLVGPTVIYSFMQAAGLTNDHLISCPRHLQCIALSSHQPA 393


>ref|XP_002530111.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
            gi|223530365|gb|EEF32255.1| DNA-3-methyladenine
            glycosylase, putative [Ricinus communis]
          Length = 403

 Score =  492 bits (1267), Expect = e-137
 Identities = 265/411 (64%), Positives = 309/411 (75%), Gaps = 22/411 (5%)
 Frame = -1

Query: 1282 MCSSKLKLQETAGSL------------DINGRPVLQPTCNRVPLLERRNSLKKNTTKSVT 1139
            MCSSK KL     +              INGRPVLQP  ++VP LERRNSLKKN+ KS  
Sbjct: 1    MCSSKSKLHHHGAAAAANHHIPASTIAKINGRPVLQPKSDQVPTLERRNSLKKNSPKSPI 60

Query: 1138 TPPKIQPLPSRISXXXXXTNISPKVRPSVITPPISPKLKSPRQPAIKRGNDPNGLSSSTE 959
              P   PLP         T I PK +PS ++PPISPKLKSPR PA+KRGND N L+SS E
Sbjct: 61   IQPPAAPLP----LLPTTTTIKPK-QPSSLSPPISPKLKSPRPPALKRGNDLNTLNSSAE 115

Query: 958  KVVLTPRSTNKVVTPVKKSKNCAPSVDT-----TALNYSSSSIVEAPGSIAAARREQVAN 794
            K  LTPR    V T +KKSK  +P+        T LNYSSS IVEAPGSIAAARRE VA 
Sbjct: 116  KF-LTPRKA--VSTTLKKSKKSSPATPVVAETCTVLNYSSSLIVEAPGSIAAARREHVAT 172

Query: 793  MQVQRKMKIAHYGRTKS---ARFESTVVPLDEAATTA--PEEKRCSFITPNSDPIYVAYH 629
            MQ QRK++ AHYGR  S   ++ ++ +VP+D  A TA   EE+RCSFITP+SDPIYVAYH
Sbjct: 173  MQEQRKLRTAHYGRVNSGSKSKRDAKIVPVDSPAATAVPQEERRCSFITPSSDPIYVAYH 232

Query: 628  DEEWGVPAHDDRLLFELLVLTGAQVGSDWTSVLKKRQEFRDAFSDFDPETVSKYSEKKIT 449
            D+EWGVP HDD++LFELLVLTGAQ+GSDWTSVLKKR+ FR+AFS FD E V+K+SEKK T
Sbjct: 233  DQEWGVPVHDDKMLFELLVLTGAQIGSDWTSVLKKREAFREAFSGFDAEIVAKFSEKKTT 292

Query: 448  SISTKYSIAMSQVRGIVDNSIRILQIKKDFGSFDKYLWGFVNHKPIVTQYKSSHKMPVKT 269
            SIS +Y + +SQVRG+VDNS RILQ+KK+FGSFDKYLWGFVNHKPI TQY+SS+K+PVKT
Sbjct: 293  SISAEYGMEISQVRGVVDNSNRILQVKKEFGSFDKYLWGFVNHKPITTQYRSSNKIPVKT 352

Query: 268  SKSEGISKDMVKKGFRLVGPTVIHSFMQAAGLTNDHLTTCPQHLQCLAFAS 116
            SKSE ISKDMVK+GFR VGPTV+HSFMQAAGL+NDHL +C +H QCLA AS
Sbjct: 353  SKSETISKDMVKRGFRYVGPTVMHSFMQAAGLSNDHLISCSRHHQCLALAS 403


>ref|XP_003531474.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
            [Glycine max]
          Length = 400

 Score =  478 bits (1231), Expect = e-132
 Identities = 251/410 (61%), Positives = 302/410 (73%), Gaps = 19/410 (4%)
 Frame = -1

Query: 1282 MCSSKLKLQETAGSL---------DINGRPVLQPTCNRVPLLERRNSLKKNTTKSVTTPP 1130
            MCSSK K+     ++          INGRPVLQPTCNRVP LERRNS+KK       +PP
Sbjct: 1    MCSSKTKVTVGLEAVVAAAKPSVARINGRPVLQPTCNRVPNLERRNSIKKVAPPKSLSPP 60

Query: 1129 KIQPLPSRISXXXXXTNISPKVRPSVITPPISPKLKSPRQPAIKRGNDPNGLSSSTEKVV 950
               PLPS+ S                +TPP+SPKLKSPR PA KRGND NGL+SS EK+V
Sbjct: 61   S-PPLPSKTS----------------LTPPVSPKLKSPRLPATKRGNDNNGLNSSYEKIV 103

Query: 949  LTPRSTNKVVTPVKKSKN-----CAPSVDTTALNYSSSSIVEAPGSIAAARREQVANMQV 785
            +   ST       KKSK+     C  +    +L+YSSS I ++PGSIAA RREQ+A  Q 
Sbjct: 104  IPRSSTKTPTLERKKSKSFKEGSCVSASIEASLSYSSSLITDSPGSIAAVRREQMALQQA 163

Query: 784  QRKMKIAHYGRTKSARFESTVVPLDEAATT-----APEEKRCSFITPNSDPIYVAYHDEE 620
            QRKMKIAHYGR+KSA+FE  VVPLD + T+       EEKRCSFITPNSDPIY+AYHDEE
Sbjct: 164  QRKMKIAHYGRSKSAKFER-VVPLDPSNTSLASKPTEEEKRCSFITPNSDPIYIAYHDEE 222

Query: 619  WGVPAHDDRLLFELLVLTGAQVGSDWTSVLKKRQEFRDAFSDFDPETVSKYSEKKITSIS 440
            WGVP HDD++LFELLVL+GAQVGSDWTS LKKR +FR AFS+FD ETV+  ++K++ SIS
Sbjct: 223  WGVPVHDDKMLFELLVLSGAQVGSDWTSTLKKRLDFRAAFSEFDAETVANLTDKQMMSIS 282

Query: 439  TKYSIAMSQVRGIVDNSIRILQIKKDFGSFDKYLWGFVNHKPIVTQYKSSHKMPVKTSKS 260
            ++Y I +S+VRG+VDN+ +IL+IKKDFGSFDKY+WGFVNHKPI TQYK  HK+PVKTSKS
Sbjct: 283  SEYGIDISRVRGVVDNANQILEIKKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKS 342

Query: 259  EGISKDMVKKGFRLVGPTVIHSFMQAAGLTNDHLTTCPQHLQCLAFASQN 110
            E ISKDMV++GFR VGPTV+HSFMQ +GLTNDHL TC +HLQC   A+++
Sbjct: 343  ESISKDMVRRGFRFVGPTVVHSFMQTSGLTNDHLITCHRHLQCTLLAARS 392


>ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|222841152|gb|EEE78699.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  472 bits (1214), Expect = e-130
 Identities = 237/330 (71%), Positives = 277/330 (83%), Gaps = 8/330 (2%)
 Frame = -1

Query: 1060 PSVITPPISPKLKSPRQPAIKRGNDPNGLSSSTEKVVLTPRSTNKVVTP-VKKSKNCAP- 887
            PS ++PPISPKLKSPR PA+KRGN+P GL++S EKV LTPRST KV T  VKKSK  +  
Sbjct: 15   PSALSPPISPKLKSPRPPAVKRGNEPGGLNTSAEKV-LTPRSTTKVTTSTVKKSKKSSTA 73

Query: 886  ----SVDTTALNYSSSSIVEAPGSIAAARREQVANMQVQRKMKIAHYGRTKSARFESTVV 719
                SVDT A+ YSSS +VEAPGSIAAARREQVA MQ QRKM+IAHYGRTKSA+++  +V
Sbjct: 74   GVPHSVDTFAMKYSSSLLVEAPGSIAAARREQVAAMQEQRKMRIAHYGRTKSAKYQGKIV 133

Query: 718  PLDEAATTA--PEEKRCSFITPNSDPIYVAYHDEEWGVPAHDDRLLFELLVLTGAQVGSD 545
            P +  AT+    EEKRCSFITPNSDP+YVAYHDEEWGVP HDD+LLFELL LTGAQVGS+
Sbjct: 134  PANSPATSTITREEKRCSFITPNSDPVYVAYHDEEWGVPVHDDKLLFELLALTGAQVGSE 193

Query: 544  WTSVLKKRQEFRDAFSDFDPETVSKYSEKKITSISTKYSIAMSQVRGIVDNSIRILQIKK 365
            WTSVLKKR+ FR+AFS FD E V+K++EKKI SIS +Y + +SQVRG+VDNS RIL++K+
Sbjct: 194  WTSVLKKREAFREAFSGFDAEIVAKFTEKKIASISAEYGLDISQVRGVVDNSNRILEVKR 253

Query: 364  DFGSFDKYLWGFVNHKPIVTQYKSSHKMPVKTSKSEGISKDMVKKGFRLVGPTVIHSFMQ 185
            +FGSFD+YLWG+VNHKPI TQYKS  K+PVKTSKSE ISKDMVK+GFR VGPTVIHSFMQ
Sbjct: 254  EFGSFDEYLWGYVNHKPISTQYKSCQKIPVKTSKSETISKDMVKRGFRFVGPTVIHSFMQ 313

Query: 184  AAGLTNDHLTTCPQHLQCLAFASQNGASVA 95
            A GL+NDHL TCP+HLQC+A ASQ   +VA
Sbjct: 314  AGGLSNDHLITCPRHLQCIALASQLPRTVA 343


Top