BLASTX nr result

ID: Bupleurum21_contig00007413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007413
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing ...   556   e-156
dbj|BAE71308.1| hypothetical protein [Trifolium pratense]             539   e-151
ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing ...   539   e-151
ref|XP_002524282.1| nucleic acid binding protein, putative [Rici...   537   e-150
ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|2...   528   e-147

>ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
            vinifera] gi|302143015|emb|CBI20310.3| unnamed protein
            product [Vitis vinifera]
          Length = 497

 Score =  556 bits (1433), Expect = e-156
 Identities = 277/385 (71%), Positives = 322/385 (83%), Gaps = 1/385 (0%)
 Frame = +3

Query: 9    SPKTSTTDYFSLDVEEDNAREASPPVEAVTPVQSLEPERTLEGSWFRANCRFRSPMLQLH 188
            SP+T+  DYFSLD   D   E SP      P  S E    +E  WFR N R RSPML+LH
Sbjct: 48   SPETAAPDYFSLDARAD-VEEPSPARFRTPPPASEEEAPAVESGWFRGNSRLRSPMLKLH 106

Query: 189  KEILDFCEFLSPTPEEQASRNAAVESVFNVIKYIWPNCQVEVFGSFKTGLYLPSSDVDVV 368
            KEILDF +FLSPTP+EQ++RNAA+ESVFNVI+YIWPNC+VEVFGSFKTGLYLP+SD+DVV
Sbjct: 107  KEILDFSDFLSPTPKEQSARNAAIESVFNVIRYIWPNCKVEVFGSFKTGLYLPTSDIDVV 166

Query: 369  IMGSNISNPQSGLMGLSRALSQQGVARSIQVIAKARVPIIKFVEKRSGISFDISFDVHNG 548
            I+GS+I  PQ GL  LSRALSQ+G+A+ IQVIAKARVPIIKF+EKRS ++FDISFDV NG
Sbjct: 167  ILGSDIKTPQIGLYALSRALSQKGIAKKIQVIAKARVPIIKFIEKRSSVAFDISFDVENG 226

Query: 549  PKAAEFIEGAIAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRCFSDF 728
            PKAAE+I+ AI+KWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAML+   ++
Sbjct: 227  PKAAEYIQDAISKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLQNLQEW 286

Query: 729  QASPEYNLGVLLVNFFDMYGRKLNTSDVGVSCNGAEIFFFKNSKGYLIKGRPSLISIQDP 908
             AS E+NLGVLLVNFFD YGRKLNT D+GV+CNG   FF K++KG++ KG+  LISI+DP
Sbjct: 287  NASVEHNLGVLLVNFFDFYGRKLNTVDIGVTCNGPGTFFLKSTKGFVNKGQKFLISIEDP 346

Query: 909  QEPDNDIGKNSFNYFQVRSAFAMAFSTLTDAKTILALGPNKSILGTIIRPDAVLLERKGG 1088
            Q P NDIGKNSFNYFQ+RSAF+MAFSTLT+A+TIL L PN+SILGTIIRPD +LLERKGG
Sbjct: 347  QLPGNDIGKNSFNYFQIRSAFSMAFSTLTNARTILGLDPNRSILGTIIRPDPILLERKGG 406

Query: 1089 CNGEVTFDKLLPGAGEP-QPESNEQ 1160
             NG +TFD LLPGAGEP  P++  Q
Sbjct: 407  SNGTMTFDHLLPGAGEPLSPQTGGQ 431


>dbj|BAE71308.1| hypothetical protein [Trifolium pratense]
          Length = 518

 Score =  539 bits (1389), Expect = e-151
 Identities = 270/379 (71%), Positives = 315/379 (83%), Gaps = 5/379 (1%)
 Frame = +3

Query: 18   TSTTDYFSLDVE-----EDNAREASPPVEAVTPVQSLEPERTLEGSWFRANCRFRSPMLQ 182
            ++  D+FSLDV      ED   E   P E  TP  ++E + TLEG WFR N +FRSPMLQ
Sbjct: 53   STAPDFFSLDVADEAEAEDPLPEPKTPAEPKTP--AIEHKPTLEGGWFRGNGKFRSPMLQ 110

Query: 183  LHKEILDFCEFLSPTPEEQASRNAAVESVFNVIKYIWPNCQVEVFGSFKTGLYLPSSDVD 362
            LHKEI+DFCEFLSPTPEE+A R+AA+ESVF VIK+IWP+CQVE+FGSF+TGLYLP+SD+D
Sbjct: 111  LHKEIVDFCEFLSPTPEEKAKRDAAIESVFEVIKHIWPHCQVEIFGSFRTGLYLPTSDID 170

Query: 363  VVIMGSNISNPQSGLMGLSRALSQQGVARSIQVIAKARVPIIKFVEKRSGISFDISFDVH 542
            VVI+ S + NPQ GL  +SR+LSQ+ +A+ IQVI KARVPIIKFVEK+SG+SFDISFD+ 
Sbjct: 171  VVILKSGLPNPQIGLNAISRSLSQRSMAKKIQVIGKARVPIIKFVEKKSGLSFDISFDID 230

Query: 543  NGPKAAEFIEGAIAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLRCFS 722
            NGPKAAE+I+ A+AKWP LRPLCLILKVFLQQRELNEVYSGGIGSYALL ML+AMLR   
Sbjct: 231  NGPKAAEYIQEAVAKWPQLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVR 290

Query: 723  DFQASPEYNLGVLLVNFFDMYGRKLNTSDVGVSCNGAEIFFFKNSKGYLIKGRPSLISIQ 902
              Q + E+NLGVLLV+FFD YGRKLNTSDVGVSC G   FF K+S+G+  K RP L+ IQ
Sbjct: 291  QSQPTAEHNLGVLLVHFFDFYGRKLNTSDVGVSCIGEGTFFRKSSRGFYNKTRPFLLGIQ 350

Query: 903  DPQEPDNDIGKNSFNYFQVRSAFAMAFSTLTDAKTILALGPNKSILGTIIRPDAVLLERK 1082
            DPQ PDNDIGKNSFNYFQVRSAF MAF+TLT+ K IL+LGPN+SILGTIIRPD VL+ERK
Sbjct: 351  DPQTPDNDIGKNSFNYFQVRSAFLMAFTTLTNPKVILSLGPNRSILGTIIRPDPVLMERK 410

Query: 1083 GGCNGEVTFDKLLPGAGEP 1139
            GG NGE+TF+ LLPGAGEP
Sbjct: 411  GGSNGEMTFNSLLPGAGEP 429


>ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing protein 5-like [Cucumis
            sativus]
          Length = 544

 Score =  539 bits (1388), Expect = e-151
 Identities = 269/393 (68%), Positives = 321/393 (81%), Gaps = 12/393 (3%)
 Frame = +3

Query: 6    ASPKTSTTDYFSLDVEEDNAREASPPVEAVTPVQSL----------EPERTLEGSWFRAN 155
            A  +T+ T++F+LDV  D   E S    +  PV S           E +  LE  WFR N
Sbjct: 57   APAETAATEFFALDVAADKGEENSGICSSPLPVTSALETEPRTPECEDQSRLESGWFRGN 116

Query: 156  CRFRSPMLQLHKEILDFCEFLSPTPEEQASRNAAVESVFNVIKYIWPNCQVEVFGSFKTG 335
               +SPMLQLHKEI+DFCEFLSPT EE+ +R++AVE VF+V+K+IWP+C+VEVFGSF+TG
Sbjct: 117  SGLKSPMLQLHKEIVDFCEFLSPTEEERVARDSAVERVFSVVKHIWPHCKVEVFGSFQTG 176

Query: 336  LYLPSSDVDVVIMGSNISNPQSGLMGLSRALSQQGVARSIQVIAKARVPIIKFVEKRSGI 515
            LYLP+SD+DVVI+GS I  PQ GL  LSRALSQ+G+A+ IQVI KARVPIIKF+EK+SGI
Sbjct: 177  LYLPTSDIDVVILGSGIPKPQLGLQALSRALSQKGIAKKIQVIGKARVPIIKFIEKQSGI 236

Query: 516  SFDISFDVHNGPKAAEFIEGAIAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAM 695
            SFDISFDV NGPKAA+FI+GA++KWPPLRPLCLILKVFLQQRELNEVYSGG+GSYALL M
Sbjct: 237  SFDISFDVQNGPKAADFIKGAVSKWPPLRPLCLILKVFLQQRELNEVYSGGLGSYALLTM 296

Query: 696  LIAMLRCFSDFQASPEYNLGVLLVNFFDMYGRKLNTSDVGVSCNGAEIFFFKNSKGYLIK 875
            L+AML+  +   +S E+NLGVLLV+FFD YGRKLNTSDVGVSCN   IFF K+ +G++ K
Sbjct: 297  LMAMLQSINVPPSSLEHNLGVLLVHFFDFYGRKLNTSDVGVSCNAGGIFFSKSYRGFMTK 356

Query: 876  GRPSLISIQDPQEPDNDIGKNSFNYFQVRSAFAMAFSTLTDAKTILALGPNKSILGTIIR 1055
            GRP L+SI+DPQ PDNDIGKNSFNYFQ+RSAFAMA+S LT+ KT+L LGPN+SILGTIIR
Sbjct: 357  GRPCLLSIEDPQAPDNDIGKNSFNYFQIRSAFAMAYSILTNVKTVLGLGPNRSILGTIIR 416

Query: 1056 PDAVLLERKGGCNGEVTFDKLLPGAGEP--QPE 1148
            PD VLL+RKGG +GEVTF+ LLPGAGEP  QPE
Sbjct: 417  PDPVLLKRKGGRHGEVTFNSLLPGAGEPVQQPE 449


>ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223536473|gb|EEF38121.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 526

 Score =  537 bits (1383), Expect = e-150
 Identities = 274/382 (71%), Positives = 315/382 (82%), Gaps = 4/382 (1%)
 Frame = +3

Query: 3    SASPKTSTTDYFSLDVEEDNAREASPPVEAVT----PVQSLEPERTLEGSWFRANCRFRS 170
            S++ ++   D+FSLDV E  A   +P V A        QS+  E  LE SWFR N RFRS
Sbjct: 62   SSAIESVAPDFFSLDVVEAAAEPKTPSVVAEPRKSKAAQSVS-ETKLESSWFRGNSRFRS 120

Query: 171  PMLQLHKEILDFCEFLSPTPEEQASRNAAVESVFNVIKYIWPNCQVEVFGSFKTGLYLPS 350
            PMLQLHKEI+DFC+FLSPTPEE+ +RN AV+ VF+VIKYIWPNC+VEVFGS+KTGLYLP+
Sbjct: 121  PMLQLHKEIVDFCDFLSPTPEEEDARNTAVKCVFDVIKYIWPNCKVEVFGSYKTGLYLPT 180

Query: 351  SDVDVVIMGSNISNPQSGLMGLSRALSQQGVARSIQVIAKARVPIIKFVEKRSGISFDIS 530
            SD+DVVI  S I NPQ GL  LSRALSQ+G+A+ IQVIAKARVPI+KFVEKRSG+SFDIS
Sbjct: 181  SDIDVVIFRSGIKNPQIGLQALSRALSQKGIAKKIQVIAKARVPIVKFVEKRSGVSFDIS 240

Query: 531  FDVHNGPKAAEFIEGAIAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAML 710
            FDV NGPKAAEFI+ A+ KWP LRPL LILKVFLQQRELNEVYSGGIGSYALL ML+A+L
Sbjct: 241  FDVDNGPKAAEFIKDAVRKWPALRPLSLILKVFLQQRELNEVYSGGIGSYALLTMLMAVL 300

Query: 711  RCFSDFQASPEYNLGVLLVNFFDMYGRKLNTSDVGVSCNGAEIFFFKNSKGYLIKGRPSL 890
            +      AS E+NLGVLLV FFD YGRKLNT+DVGVSC GA  FF K  KG++ KGRP L
Sbjct: 301  K------ASSEHNLGVLLVYFFDFYGRKLNTTDVGVSCKGAGTFFSKRKKGFMNKGRPFL 354

Query: 891  ISIQDPQEPDNDIGKNSFNYFQVRSAFAMAFSTLTDAKTILALGPNKSILGTIIRPDAVL 1070
            I+I+DPQ PDNDIGKNSFNY Q+RSAF+MAFSTLT+ +TIL+LGPN+SILGTIIRPD++L
Sbjct: 355  IAIEDPQAPDNDIGKNSFNYSQIRSAFSMAFSTLTNPRTILSLGPNRSILGTIIRPDSIL 414

Query: 1071 LERKGGCNGEVTFDKLLPGAGE 1136
            LERK GCNGEVTF  LLPGAGE
Sbjct: 415  LERKAGCNGEVTFSSLLPGAGE 436


>ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|222869762|gb|EEF06893.1|
            predicted protein [Populus trichocarpa]
          Length = 543

 Score =  528 bits (1360), Expect = e-147
 Identities = 269/392 (68%), Positives = 316/392 (80%), Gaps = 13/392 (3%)
 Frame = +3

Query: 3    SASPKTSTTDYFSLDVEEDNAREASPPVEAVTPVQSLE-------------PERTLEGSW 143
            +A+ +++  D+FSLDV   +  E    +E  TPV                 PE   E  W
Sbjct: 56   AAAAESAAPDFFSLDVGSGDEEE----LELKTPVNGEAKGKRKAEVETENLPEPMTESVW 111

Query: 144  FRANCRFRSPMLQLHKEILDFCEFLSPTPEEQASRNAAVESVFNVIKYIWPNCQVEVFGS 323
            FR + +FRSPMLQLHKEI+DFC+FLSPT EEQASR  AV  VF+VIKYIWPNC+VEVFGS
Sbjct: 112  FRGDSKFRSPMLQLHKEIVDFCDFLSPTQEEQASRAEAVRCVFDVIKYIWPNCKVEVFGS 171

Query: 324  FKTGLYLPSSDVDVVIMGSNISNPQSGLMGLSRALSQQGVARSIQVIAKARVPIIKFVEK 503
            F+TGLYLP+SD+DVVI+GS + +PQ GL  LSRALSQ+GVA+ IQVIA+ARVPI+KFVEK
Sbjct: 172  FRTGLYLPTSDIDVVILGSGLKSPQIGLNALSRALSQKGVAKKIQVIARARVPIVKFVEK 231

Query: 504  RSGISFDISFDVHNGPKAAEFIEGAIAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYA 683
            RSG+SFDISFDV+ GP AAEFI+ AI+KWP LRPLCLILKVFLQQRELNEVYSGGI SYA
Sbjct: 232  RSGVSFDISFDVNGGPIAAEFIKNAISKWPELRPLCLILKVFLQQRELNEVYSGGISSYA 291

Query: 684  LLAMLIAMLRCFSDFQASPEYNLGVLLVNFFDMYGRKLNTSDVGVSCNGAEIFFFKNSKG 863
            LLAML+AML+   + QAS E NLG+LL++FFD YGRKLNT++VGVSC G   FF K +KG
Sbjct: 292  LLAMLMAMLQNHRECQASLERNLGLLLIHFFDFYGRKLNTTNVGVSCKGTGTFFSKRTKG 351

Query: 864  YLIKGRPSLISIQDPQEPDNDIGKNSFNYFQVRSAFAMAFSTLTDAKTILALGPNKSILG 1043
            ++  GRP LI+I+DPQ P+NDIGKNSFNYFQ+RSAFAMAF+TLT+ KTIL+LGPN+SILG
Sbjct: 352  FMNNGRPFLIAIEDPQAPENDIGKNSFNYFQIRSAFAMAFTTLTNPKTILSLGPNRSILG 411

Query: 1044 TIIRPDAVLLERKGGCNGEVTFDKLLPGAGEP 1139
            TIIRPD VLLERKGG NGEVTF  LLPGAGEP
Sbjct: 412  TIIRPDPVLLERKGGKNGEVTFSSLLPGAGEP 443


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