BLASTX nr result
ID: Bupleurum21_contig00007409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00007409
(1408 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein... 200 9e-49
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 163 1e-37
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g... 133 1e-28
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera] 131 4e-28
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera] 129 2e-27
>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Cucumis
sativus] gi|449503744|ref|XP_004162155.1| PREDICTED:
putative F-box/LRR-repeat protein At3g18150-like [Cucumis
sativus]
Length = 512
Score = 200 bits (508), Expect = 9e-49
Identities = 146/474 (30%), Positives = 243/474 (51%), Gaps = 31/474 (6%)
Frame = +2
Query: 80 KQKGSEDDQEDRISNLPDSILLHILSFLPMKDVVKTVLLRRFGNLWTSVQSLDFDGRSYL 259
K+ +E+D+ D IS LP+S+L+ ILS+LP +D VK L+ RF NLWT + L FD +Y
Sbjct: 6 KRTRTEEDRNDWISQLPESVLVDILSYLPTRDAVKMALISRFRNLWTYIHHLSFDECAYH 65
Query: 260 --------NFSKARHSKWYRDFVTRVLHRHECSTIFRFSLKFGSYLY-------FSPRGF 394
N+ + + + + + VL HE + I F LKF L+ ++ G+
Sbjct: 66 DHNIYDGENYDGPHYDERFLNLIRHVLILHERTIIDEFHLKFAFNLFNAIHDDQYNSDGY 125
Query: 395 KPCKEKKTLKPNLASTIDSWIYFALRKKVKILNLGILAHGSSSTRFDYDLPAAVFISDSV 574
KE++ +AS + +WI F+LRK+VK+L++ +L G S +Y+LP ++ + +
Sbjct: 126 AS-KERR-----MASELTTWIKFSLRKQVKVLDIDLLGCGLSEPEVNYELPTSILTNKYL 179
Query: 575 TELNLVNISLKQPEQVNXXXXXXXXXXXIVLDDKMMETILSGCPSLESLSLNQCFGLEKL 754
EL+L +++ ++ I+L DK+M IL GCP LE LSL+ C GL KL
Sbjct: 180 KELSLTGCGIEEKGRIQLTSLSKLSLKEIMLSDKIMGEILIGCPMLEELSLDGCCGLHKL 239
Query: 755 NCTSVCLTKLVIVIG----DESAKVEISGPNLTSLSISGLSGHVDVRNIASVSDATLDFW 922
T+ + +L I++G ++++EIS P L SL ++G V ++ AS+ DA+L +
Sbjct: 240 KLTTSNIKRLKIIVGWRNEMSNSRLEISCPGLKSLELAGAIHLVQLKYSASIFDASL--Y 297
Query: 923 YG---------YCAIGSLLEGLHQASTFTMSSWCIMMLLMENIN-IPCASSLRKHLVLKT 1072
Y Y + LL L + S F +W ++ + ++ +P + K + +
Sbjct: 298 YSRTFMCERRIYEKVQMLLWKLAEVSVFIPCTWTTLIFTIWDLTYVPIPVAGWKSVEFRL 357
Query: 1073 IITKRHLVGITRLLRSSPHLETLTIHIGDGTSFENPDDNLRVGISGVHRMQFWNDERWMN 1252
+ TK H+ GI +LR+S LETLT +I G+ + + +WM
Sbjct: 358 LFTKWHMPGICSILRNSHWLETLTFYIYPGS----------------YSTFLTEEAKWME 401
Query: 1253 SSDISMKHIFES-DPPFT-CLTNHMKTVCIYGACSSNSSLLQLVKFLLGNCFRL 1408
+ D K ++S + F L ++KTV IYG + +L+L++FLL N L
Sbjct: 402 AYDFDGKSYWKSQNGDFRGGLRKYLKTVKIYGYV-TEPYVLELIEFLLKNALVL 454
>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
vinifera]
Length = 610
Score = 163 bits (412), Expect = 1e-37
Identities = 144/492 (29%), Positives = 230/492 (46%), Gaps = 31/492 (6%)
Frame = +2
Query: 14 GSNSQFSSGKMKRIEGLEASNKKQKGSED--DQEDRISNLPDSILLHILSFLPMKDVVKT 187
G++ +SS + + + + + G E+ ++D IS L DSIL+ ILSFLPMK VV T
Sbjct: 40 GNDGYYSSHESGANQSVRGDDDEDDGDEEISSRKDGISELSDSILIRILSFLPMKYVVAT 99
Query: 188 -VLLRRFGNLWTSVQSLDFDGRSYLNFSKARHSKWYRDFVTRVLHRHECSTIFRFSLKFG 364
+L +R+ LWT V +L F R R + + + + + L H+ S I +F + F
Sbjct: 100 SILSKRWQFLWTMVPNLVFRFR--------RRDEHFVNSIDKTLVLHQNSQIKKFLIDF- 150
Query: 365 SYLYFSPRGFKPCKEKKTLKPNLASTIDSWIYFALRKKVKILNLGILAHG---SSSTRFD 535
T + S+++ WI A RK V+ L+L SS +
Sbjct: 151 -----------------TYQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYA 193
Query: 536 YDLPAAVFISDSVTELNLVNISLKQPEQVNXXXXXXXXXXXIVLDDKMMETILSGCPSLE 715
+ LP ++ + S+ +L+L ++K ++ + L D ++E ILSGCP+LE
Sbjct: 194 HALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALE 253
Query: 716 SLSLNQCFGLEKLNCTSVCLTKLVIVIGDESAK------VEISGPNLTSLSISG--LSGH 871
SL L+ CFG+ LN TS L KLVI +S+ ++IS PN+ SL I G +
Sbjct: 254 SLELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKE 313
Query: 872 VDVRNIASVSDATLDFWYG-------------YCAIGSLLEGLHQASTFTMSSWCIMML- 1009
V+N+ S+ DA+L+F + + LL+ ++ T+ +WCI +L
Sbjct: 314 CRVKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQVLS 373
Query: 1010 LMENINIPCASSLRKHLVLKTIITKRHLVGITRLLRSSPHLETLTIHIGDGTSFENPDDN 1189
+ E ++ S K L+L T + K L GI LL+SS HLET I++ S +
Sbjct: 374 IFEGKDLSSLLSNLKCLILDTHLNKWDLPGIANLLQSSTHLETFVINMISPCS---QQIS 430
Query: 1190 LRVGISGVHRMQFWNDERWMNSSDISMKHIFESDPPFTCLTNHMKTVCIYGACSSNSSL- 1366
+ VG S F ++ W + + + ++KTV I G + +
Sbjct: 431 VEVGFSFTDLHNFDEEKYWSSREGVLANSLI-----------NLKTVKIIGVIWNQPGIE 479
Query: 1367 --LQLVKFLLGN 1396
LVKFLL N
Sbjct: 480 LVFGLVKFLLKN 491
>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
gi|222847400|gb|EEE84947.1| f-box family protein [Populus
trichocarpa]
Length = 481
Score = 133 bits (335), Expect = 1e-28
Identities = 110/390 (28%), Positives = 187/390 (47%), Gaps = 27/390 (6%)
Frame = +2
Query: 86 KGSEDDQEDRISNLPDSILLHILSFLPMKDVVKT-VLLRRFGNLWTSVQSLDFDGRSYLN 262
+ E + DRISNLPD I+ HILSFLP D +KT +L +R+ ++WT V +L F
Sbjct: 37 QNKECQKVDRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIFRREC--- 93
Query: 263 FSKARHSKWYRDFVTRVLHRHECSTIFRFSLKFGSYLYFSPRGFKPCKEKKTLKPNLAST 442
S ++ ++ + FV + L + + +F ++F F C +
Sbjct: 94 -SCSQEAENFAVFVDKALMHYCSPKVKKFLVEF---------EFTEC---------FKAQ 134
Query: 443 IDSWIYFALRKKVKILNLGILAHGSSSTRFDYDLPAAVFISDSVTELNL--VNISLKQPE 616
+DSW+ FA+R KV+ L L + + Y LP ++ + +L+L +S + +
Sbjct: 135 VDSWVDFAVRLKVEELCLEFHREIADDPDY-YYLPNFLYSNIPAEKLSLRFCALSPNKLK 193
Query: 617 QVNXXXXXXXXXXXIVLDDKMMETILSGCPSLESLSLNQCFGLEKLNCTSVCLTKLVIVI 796
QV+ L ++M++ I GC LE L LNQC G +++N K ++V
Sbjct: 194 QVSWMSLKVLSISYSWLSNEMIKNIFLGCSLLEYLKLNQCCGFDQINTNFSSSLKDLVVD 253
Query: 797 GDESAK-------VEISGPNLTSLSISGLSGHVD--VRNIASVSDATLDFWYGYCAIG-- 943
G + + I GPNL SL+++G + + +++S+ +A++ + C+ G
Sbjct: 254 GSWGPEDKFGDFVITIKGPNLLSLTLAGYMHRANYMLLDVSSLVEASIGYRMKSCSHGCR 313
Query: 944 ------------SLLEGLHQASTFTMSSWCIMMLLMENI-NIPCASSLRKHLVLKTIITK 1084
LLE L T+ +WC+ +L + + + +S K+L L I K
Sbjct: 314 SNWYSAHRSVLHDLLEKLQHVEKLTIGTWCLQVLSISEVKGLSSPTSACKYLTLNKKINK 373
Query: 1085 RHLVGITRLLRSSPHLETLTIHIGDGTSFE 1174
L GI LL+SSP+L+ LTI++ +FE
Sbjct: 374 WDLPGIASLLQSSPNLQKLTINLMPSNNFE 403
>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
Length = 891
Score = 131 bits (330), Expect = 4e-28
Identities = 106/358 (29%), Positives = 172/358 (48%), Gaps = 27/358 (7%)
Frame = +2
Query: 14 GSNSQFSSGKMKRIEGLEASNKKQKGSED--DQEDRISNLPDSILLHILSFLPMKDVVKT 187
G++ +SS + + + + G E+ ++D IS L DSIL+ ILSFLPMK VV T
Sbjct: 40 GNDGYYSSHDSGANQSVRGDDDEDDGDEEISSRKDGISELSDSILIRILSFLPMKYVVAT 99
Query: 188 -VLLRRFGNLWTSVQSLDFDGRSYLNFSKARHSKWYRDFVTRVLHRHECSTIFRFSLKFG 364
+L +R+ LWT V +L F R R + + + + + L H+ S I +F + F
Sbjct: 100 SILSKRWQFLWTMVPNLVFRFR--------RRDEHFVNSIDKTLVLHQNSQIKKFLIDF- 150
Query: 365 SYLYFSPRGFKPCKEKKTLKPNLASTIDSWIYFALRKKVKILNLGILAHG---SSSTRFD 535
T + S+++ WI A RK V+ L+L SS +
Sbjct: 151 -----------------TYQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYA 193
Query: 536 YDLPAAVFISDSVTELNLVNISLKQPEQVNXXXXXXXXXXXIVLDDKMMETILSGCPSLE 715
+ LP ++ + S+ +L+L ++K ++ + L D ++E ILSGCP+LE
Sbjct: 194 HALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALE 253
Query: 716 SLSLNQCFGLEKLNCTSVCLTKLVIVIGDESAK------VEISGPNLTSLSISG--LSGH 871
SL L+ CFG+ LN TS L KLVI +S+ ++IS PN+ SL I G +
Sbjct: 254 SLELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKE 313
Query: 872 VDVRNIASVSDATLDFWYG-------------YCAIGSLLEGLHQASTFTMSSWCIMM 1006
V+N+ S+ DA+L+F + + LL+ ++ T+ +WCI +
Sbjct: 314 CRVKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQI 371
>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
Length = 526
Score = 129 bits (324), Expect = 2e-27
Identities = 132/482 (27%), Positives = 210/482 (43%), Gaps = 42/482 (8%)
Frame = +2
Query: 77 KKQKGSEDDQEDRISNLPDSILLHILSFLPMKDVVKT-VLLRRFGNLWTSVQSLDFDGRS 253
+ +K + + DRIS LPD +L+HILSFLPM ++T VL +RF W S +L FD
Sbjct: 24 RSRKNPRESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFD--- 80
Query: 254 YLNFSKARHSKW-YRDFVTRV-----LHRHECSTIFRFSLKFGSYLYFSPRGFKPCKEKK 415
+ S+W DF+T V LH C KF Y+ C ++
Sbjct: 81 -------QDSEWEIDDFITFVNRALLLHBPNCKV-----QKFTIYM--------DCMDQV 120
Query: 416 TLKPNLASTIDSWIYFALRKKVKILNLGILAHGSS----STRFD---YDLPAAVFISDSV 574
+ W+ FA RK V+ LNLG +R+D Y LP +F S
Sbjct: 121 IENSLQEDCVTLWLRFATRKGVEKLNLGFNDEEDPLQLWESRYDSYRYLLPQFIFRHSSF 180
Query: 575 TELNLVNISLKQPEQVNXXXXXXXXXXXIVLDDKMMETILSGCPSLESLSLNQCFGLEKL 754
+L + V+ L+++ + IL G P+LE L ++C G ++
Sbjct: 181 RKLATRFCNFVTYGVVSWAWLKSLSIGYAELNEETIRNILMGSPALECLEFHRCHGFARI 240
Query: 755 NCTSVCLTKLVIV------IGDESAKVEISGPNLTSLSISG-LSGHVDVRNIASVSDATL 913
N S L KL I+ + +E+S PN+ SL +SG + +++S+ +A L
Sbjct: 241 NICSESLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKL 300
Query: 914 D------------FWYGYC-AIGSLLEGLHQASTFTMSSWCIMML-LMENINIPCASSLR 1051
D F Y + +L+ L T+ +WC+ +L ++E ++P S
Sbjct: 301 DIQMMHQDRNFQYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKH 360
Query: 1052 KHLVLKTIITKRHLVGITRLLRSSPHLETLTIHIGDGTSFENPDDNLRVGISGVHRMQFW 1231
++L+L T+ K L GI LL+SSP LE L I + NP ++ ++FW
Sbjct: 361 RYLILNTLPKKWDLPGIASLLKSSPDLEKLHIDV-------NP----------LNVLKFW 403
Query: 1232 NDERWMNSSDISMKH---IFES-DPPFTCLTNHMKTVCIYGACSSNSSL---LQLVKFLL 1390
+ + N H +ES + F CL ++K + I G + + ++FLL
Sbjct: 404 EXQVFNNYYKYGDDHGESFWESEEKSFKCLLQNLKIIKIVGFDPGYCDIQFAIAFIEFLL 463
Query: 1391 GN 1396
N
Sbjct: 464 KN 465