BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007402
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   135   3e-30
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   132   4e-29
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   111   5e-23
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       111   5e-23
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       108   3e-22

>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/108 (62%), Positives = 83/108 (76%)
 Frame = +2

Query: 17  ERIITLANRRQLWYGGRYLRAWENDVNIIQKPRAKTFVNEIDYVTLHFGCQVSKTKYSVF 196
           E II+LA  +QLWYGG YL+A E D++II KPR  TF++ +D +TLHFG Q+S  ++ V 
Sbjct: 60  ELIISLA--KQLWYGGNYLKAREMDLDIIPKPR--TFLHSMDRITLHFGYQMSNERFCVL 115

Query: 197 WKKIDVKVKFGFGLHKFYFFLSHESIDYMLQLSSENIWNIELRHPRGQ 340
           WK I+V VKFGFGL KFYFFLSH S +Y L+LS ENIW I+LR PRGQ
Sbjct: 116 WKAINVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQ 163


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/108 (59%), Positives = 83/108 (76%)
 Frame = +2

Query: 17  ERIITLANRRQLWYGGRYLRAWENDVNIIQKPRAKTFVNEIDYVTLHFGCQVSKTKYSVF 196
           E IITL  ++++WYG  YL+A E D++II KPRA  F++ +D +TLHFGCQ+S  ++ V 
Sbjct: 60  EFIITLC-KKKVWYGRNYLKAREMDLDIIPKPRA--FLHSMDRITLHFGCQMSDERFCVL 116

Query: 197 WKKIDVKVKFGFGLHKFYFFLSHESIDYMLQLSSENIWNIELRHPRGQ 340
           WK I+V VKFG GL KFYFFLSH S +Y L+LS ENIW I+L+HPRGQ
Sbjct: 117 WKAINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQ 164


>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1133

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/113 (51%), Positives = 75/113 (66%)
 Frame = +2

Query: 2   TSQSTERIITLANRRQLWYGGRYLRAWENDVNIIQKPRAKTFVNEIDYVTLHFGCQVSKT 181
           T+++ E+II+LAN R LWYG  YL A   D +II +PR+  F++ ++ VTLHFG Q SK 
Sbjct: 55  TTRAAEQIISLANPR-LWYGHSYLNARPMDRDIIPQPRS--FLHTMESVTLHFGYQTSKE 111

Query: 182 KYSVFWKKIDVKVKFGFGLHKFYFFLSHESIDYMLQLSSENIWNIELRHPRGQ 340
           K+S  W   +V V FG G+ K +FFLSH   +Y L L  ENIW IEL  PRGQ
Sbjct: 112 KFSAVWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQ 164


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/112 (52%), Positives = 76/112 (67%)
 Frame = +2

Query: 5   SQSTERIITLANRRQLWYGGRYLRAWENDVNIIQKPRAKTFVNEIDYVTLHFGCQVSKTK 184
           ++S E II LA++  L+YG  YL+AWE   +I+Q    +T+V  +D VTL+FGCQ+S  K
Sbjct: 55  NKSAEFIIDLASKG-LYYGPSYLKAWEMKTDIVQP---RTYVEHMDGVTLNFGCQISDKK 110

Query: 185 YSVFWKKIDVKVKFGFGLHKFYFFLSHESIDYMLQLSSENIWNIELRHPRGQ 340
           ++V   K DV +KFG GL K YFFLSH S DY LQLS ENIW + L  P GQ
Sbjct: 111 FAVLGSK-DVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQ 161


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/113 (51%), Positives = 77/113 (68%)
 Frame = +2

Query: 2   TSQSTERIITLANRRQLWYGGRYLRAWENDVNIIQKPRAKTFVNEIDYVTLHFGCQVSKT 181
           +++S E II LA+   L+YG  YL+AWE + +I+Q    +T+V  +D VTL+FGCQ+S  
Sbjct: 54  SNKSAELIIDLASMG-LYYGPSYLKAWEMNTDIVQP---RTYVQHMDGVTLNFGCQISDK 109

Query: 182 KYSVFWKKIDVKVKFGFGLHKFYFFLSHESIDYMLQLSSENIWNIELRHPRGQ 340
           K++V   K DV +KFG GL K YFFLS+ S DY LQLS ENIW + L  P GQ
Sbjct: 110 KFAVLGSK-DVSIKFGIGLKKIYFFLSYGSSDYKLQLSYENIWQVVLHRPYGQ 161