BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007393
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   162   2e-38
ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   152   2e-35
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   149   2e-34
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   149   3e-34
ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative ...   147   7e-34

>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/94 (87%), Positives = 89/94 (94%)
 Frame = +2

Query: 2   SGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLKALGEKLSFEIAVGLNGRVWVNAES 181
           SGKAAEFGPLKDGYMFESSTGLSRMLLSSP CPVL+ALG+KLSFEIAVGLNGRVWVNA S
Sbjct: 144 SGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNASS 203

Query: 182 PSTVILVSNAIINSESLTGAQQKLMVDKLLKRTQ 283
           PSTVILV+NAI+NSESL+  QQK+MVDKLL+R Q
Sbjct: 204 PSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/94 (79%), Positives = 86/94 (91%)
 Frame = +2

Query: 2   SGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLKALGEKLSFEIAVGLNGRVWVNAES 181
           SGKAAEFG LKDGYMFE STGLSRMLLSSP CPVL+ALG+KLSFEIAVGLNGRVWVNA S
Sbjct: 147 SGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNANS 206

Query: 182 PSTVILVSNAIINSESLTGAQQKLMVDKLLKRTQ 283
           PS VI+V+NAI+NSE+L+G QQK+M +KLL++ Q
Sbjct: 207 PSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/90 (81%), Positives = 85/90 (94%)
 Frame = +2

Query: 2   SGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLKALGEKLSFEIAVGLNGRVWVNAES 181
           SGKAA FG LKDGYMFE STGLSRMLLSSP+CPVL++LG+KLSFE AVGLNGRVWVNA+S
Sbjct: 147 SGKAAGFGLLKDGYMFECSTGLSRMLLSSPSCPVLESLGKKLSFETAVGLNGRVWVNADS 206

Query: 182 PSTVILVSNAIINSESLTGAQQKLMVDKLL 271
           PST+I+VSNAI+NSE+L+G QQ++MVDKLL
Sbjct: 207 PSTIIVVSNAILNSETLSGVQQRIMVDKLL 236


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/92 (79%), Positives = 85/92 (92%)
 Frame = +2

Query: 2   SGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLKALGEKLSFEIAVGLNGRVWVNAES 181
           SGKAAEFG LKDGYMFE +TGLSRMLLSSP CPVL ALG+KLSFEIAVGLNGRVWV+A S
Sbjct: 147 SGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLSFEIAVGLNGRVWVSAAS 206

Query: 182 PSTVILVSNAIINSESLTGAQQKLMVDKLLKR 277
           P T I+V+NAI+NSE+L+GAQQ++MV+KLL+R
Sbjct: 207 PQTTIVVANAIMNSETLSGAQQRIMVEKLLER 238


>ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative [Ricinus communis]
           gi|223550521|gb|EEF52008.1| Exosome complex exonuclease
           RRP40, putative [Ricinus communis]
          Length = 234

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/92 (78%), Positives = 83/92 (90%)
 Frame = +2

Query: 2   SGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLKALGEKLSFEIAVGLNGRVWVNAES 181
           SGKA EFG LKDGYMFE STGLSRMLLSSP CPVL+ALG+KLSFEIAVG+NGRVWVNA S
Sbjct: 119 SGKAVEFGVLKDGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGINGRVWVNATS 178

Query: 182 PSTVILVSNAIINSESLTGAQQKLMVDKLLKR 277
           PST+I+V+NAI+NSE+L+  QQK+MVD LL +
Sbjct: 179 PSTIIVVANAIMNSETLSAVQQKIMVDNLLDK 210