BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007380
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26162.3| unnamed protein product [Vitis vinifera]               82   1e-13
ref|XP_002873920.1| pentatricopeptide repeat-containing protein ...    77   3e-12
ref|NP_197396.1| pentatricopeptide repeat-containing protein [Ar...    72   6e-11
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...    72   6e-11
gb|ABD96889.1| hypothetical protein [Cleome spinosa]                   69   9e-10

>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
 Frame = -3

Query: 372 ETSNFNLRNI-TTGGAGGGELXXXXXXXXXXXXXQEALKDVSKYLRNRPRWEQTLVSEFA 196
           +  N  +RN+    G   G++             +E +K VS   R RPRWEQTL+S+F 
Sbjct: 61  QNPNSRIRNLGVVSGNQYGDVEGAHQHTQQQQHLEEIVKRVSDITRTRPRWEQTLLSDFP 120

Query: 195 GIDFSDSYVLHEIIKIQNNAMLKVRFFYWVTSQYGFPSDEHLYKLIFNSLVETKAASIAL 16
             +F D   L   ++ Q NA++ +RFF+W++SQ GF  D     ++F++LVE  A + A 
Sbjct: 121 SFNFLDPTFLSHFVEHQKNALISLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAK 180

Query: 15  KFLE 4
            FL+
Sbjct: 181 SFLD 184


>ref|XP_002873920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319757|gb|EFH50179.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 483

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 36/89 (40%), Positives = 51/89 (57%)
 Frame = -3

Query: 270 EALKDVSKYLRNRPRWEQTLVSEFAGIDFSDSYVLHEIIKIQNNAMLKVRFFYWVTSQYG 91
           E  K VS  +R R RW+QTLVS+F   DF+D     +++K QNN M  + FF W+ S Y 
Sbjct: 49  EMAKTVSTIMRQRQRWQQTLVSDFPSFDFADPLFFRQLLKSQNNVMFSLWFFRWLCSNYD 108

Query: 90  FPSDEHLYKLIFNSLVETKAASIALKFLE 4
           +  D     L+F +L++ KA   A  FL+
Sbjct: 109 YTPDSVSLNLLFGALLDGKAVKAAKSFLD 137


>ref|NP_197396.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635758|sp|Q8GYM2.2|PP393_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g18950 gi|332005249|gb|AED92632.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 483

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/89 (38%), Positives = 50/89 (56%)
 Frame = -3

Query: 270 EALKDVSKYLRNRPRWEQTLVSEFAGIDFSDSYVLHEIIKIQNNAMLKVRFFYWVTSQYG 91
           E  K VS  +R R RW+QTLVS+F   DF+D     E++K QNN +  + FF W+ S Y 
Sbjct: 49  EMAKTVSTIMRERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYD 108

Query: 90  FPSDEHLYKLIFNSLVETKAASIALKFLE 4
           +        ++F +L++ KA   A  FL+
Sbjct: 109 YTPGPVSLNILFGALLDGKAVKAAKSFLD 137


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/90 (35%), Positives = 51/90 (56%)
 Frame = -3

Query: 270 EALKDVSKYLRNRPRWEQTLVSEFAGIDFSDSYVLHEIIKIQNNAMLKVRFFYWVTSQYG 91
           + L ++    R++PRWE TL+S++   +FS+       +K QNN  L +RF +W+TS  G
Sbjct: 33  QTLNEICTITRSKPRWENTLISQYPSFNFSNPKFFLSYLKHQNNTFLSLRFLHWLTSHCG 92

Query: 90  FPSDEHLYKLIFNSLVETKAASIALKFLEY 1
           F  D+     +F++LV+  A   A   LEY
Sbjct: 93  FKPDQSSCNALFDALVDAGAVKAAKSLLEY 122


>gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 31/84 (36%), Positives = 48/84 (57%)
 Frame = -3

Query: 270 EALKDVSKYLRNRPRWEQTLVSEFAGIDFSDSYVLHEIIKIQNNAMLKVRFFYWVTSQYG 91
           E  K V+   R +PRWEQTLVS+F   +F+D     E++  QNN +L +RFF W+ + + 
Sbjct: 60  EMAKIVATITREKPRWEQTLVSDFPSFNFADPLFFRELVATQNNVLLSLRFFQWLCTNHD 119

Query: 90  FPSDEHLYKLIFNSLVETKAASIA 19
              D     ++F +L++ KA   A
Sbjct: 120 CTPDPISSNMLFEALLDAKAVRAA 143