BLASTX nr result

ID: Bupleurum21_contig00007378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007378
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   285   1e-74
ref|XP_004153543.1| PREDICTED: U3 small nucleolar ribonucleoprot...   275   2e-71
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   275   2e-71
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...   272   1e-70
ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprot...   271   2e-70

>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  285 bits (729), Expect = 1e-74
 Identities = 135/161 (83%), Positives = 149/161 (92%)
 Frame = -3

Query: 883 REGGHREAHVMHRYHITARDDYKKYSSLCYMVQKLVNILKQMDQRDPDRIQMTASLLEKL 704
           REGGHREAHVMHRYH+T RDDYKKYS LC MVQKLVNILKQMD RDP RI+MT  LLEKL
Sbjct: 22  REGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQMDPRDPFRIEMTDMLLEKL 81

Query: 703 YNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVKLKFAEHLKEAITYIEQGHVRVGPQTV 524
           YNIGVIP+RK L LC  L+VSSFCRRRL+T+LV+LKFAEHLKEA+TYIEQGH+RVGP TV
Sbjct: 82  YNIGVIPTRKSLALCDRLAVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHIRVGPDTV 141

Query: 523 TDPAYLVTRNMEDFVTWVDTSKIKRKVLQYNEQLDDYDALN 401
           TDPA+LVTRN+EDFVTWVD+SKIKRKVLQYNE+LDDYDA+N
Sbjct: 142 TDPAFLVTRNLEDFVTWVDSSKIKRKVLQYNERLDDYDAMN 182


>ref|XP_004153543.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Cucumis sativus] gi|449476409|ref|XP_004154729.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Cucumis sativus]
          Length = 183

 Score =  275 bits (702), Expect = 2e-71
 Identities = 126/161 (78%), Positives = 150/161 (93%)
 Frame = -3

Query: 883 REGGHREAHVMHRYHITARDDYKKYSSLCYMVQKLVNILKQMDQRDPDRIQMTASLLEKL 704
           REGGHREA VMHRYHIT RDDYKKYSSLC  VQKLV +LK+M+++DP R+++T  LLEKL
Sbjct: 22  REGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTMLKKMNEKDPFRLELTEKLLEKL 81

Query: 703 YNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVKLKFAEHLKEAITYIEQGHVRVGPQTV 524
           YN+GVIP+R+ LNLC  LSVSSFCRRRL+T+LV+LKFAEHL+EA+TYIEQGH+RVGP+TV
Sbjct: 82  YNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV 141

Query: 523 TDPAYLVTRNMEDFVTWVDTSKIKRKVLQYNEQLDDYDALN 401
           TDPA+LVTRNMEDF+TWVD+SKIKRK+LQYN+QLDDYDA+N
Sbjct: 142 TDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDAIN 182


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  275 bits (702), Expect = 2e-71
 Identities = 132/161 (81%), Positives = 146/161 (90%)
 Frame = -3

Query: 883 REGGHREAHVMHRYHITARDDYKKYSSLCYMVQKLVNILKQMDQRDPDRIQMTASLLEKL 704
           REG HREA VM RYHI  RDDYKKYS +C MVQKLVNILKQMD RDP R++MT  LLEKL
Sbjct: 22  REGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNILKQMDPRDPYRVEMTDILLEKL 81

Query: 703 YNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVKLKFAEHLKEAITYIEQGHVRVGPQTV 524
           YN+GVIPSRK L LC  LSVSSFCRRRL+T+L++LKFAEHLKEAITYIEQGH+RVGP+TV
Sbjct: 82  YNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQGHIRVGPETV 141

Query: 523 TDPAYLVTRNMEDFVTWVDTSKIKRKVLQYNEQLDDYDALN 401
           TDPA+LVTRNMEDFVTWVDTSKIKRKVL+YNE+LDDYDA+N
Sbjct: 142 TDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEKLDDYDAMN 182


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  272 bits (696), Expect = 1e-70
 Identities = 129/161 (80%), Positives = 145/161 (90%)
 Frame = -3

Query: 883 REGGHREAHVMHRYHITARDDYKKYSSLCYMVQKLVNILKQMDQRDPDRIQMTASLLEKL 704
           RE  HREAHVM RYHI  RDDYKKYSS+C MVQKL NILKQMD RDP R++MT  LLEKL
Sbjct: 22  RENNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPFRVEMTDVLLEKL 81

Query: 703 YNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVKLKFAEHLKEAITYIEQGHVRVGPQTV 524
           YN+GVIPSRK L LC  LSVSSFCRRRL+T+L++LKFAEHLKEA+TYIEQGH+RVGP+TV
Sbjct: 82  YNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAVTYIEQGHIRVGPETV 141

Query: 523 TDPAYLVTRNMEDFVTWVDTSKIKRKVLQYNEQLDDYDALN 401
           TDPA+LVTRN EDFVTWVDTSKIKRKVL+YNE++DDYDA+N
Sbjct: 142 TDPAFLVTRNTEDFVTWVDTSKIKRKVLEYNEKVDDYDAMN 182


>ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max] gi|356575988|ref|XP_003556117.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Glycine max] gi|255637789|gb|ACU19216.1|
           unknown [Glycine max]
          Length = 182

 Score =  271 bits (694), Expect = 2e-70
 Identities = 125/161 (77%), Positives = 147/161 (91%)
 Frame = -3

Query: 883 REGGHREAHVMHRYHITARDDYKKYSSLCYMVQKLVNILKQMDQRDPDRIQMTASLLEKL 704
           REGGHRE  +M RYH+T RDDYKKYS LC+MVQKLVNILKQMD +DP R+ MT  LLEKL
Sbjct: 22  REGGHRENLIMQRYHVTGRDDYKKYSGLCHMVQKLVNILKQMDPKDPFRVDMTDKLLEKL 81

Query: 703 YNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVKLKFAEHLKEAITYIEQGHVRVGPQTV 524
           YN+GVIP+R+ + LC+ L+VSSFCRRRL+T+LV+LKFAEHLKEA+TYIEQGH+RVGP+TV
Sbjct: 82  YNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHIRVGPETV 141

Query: 523 TDPAYLVTRNMEDFVTWVDTSKIKRKVLQYNEQLDDYDALN 401
           TDPA+LVTRNMEDFVTWVD+SKIKRKVLQYN++LDDYD +N
Sbjct: 142 TDPAFLVTRNMEDFVTWVDSSKIKRKVLQYNDKLDDYDLMN 182


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