BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007367
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Ni...   252   1e-64
emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Ni...   250   3e-64
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni...   248   2e-63
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...   244   3e-62
emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Ni...   241   1e-61

>emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
           benthamiana]
          Length = 613

 Score =  252 bits (643), Expect = 1e-64
 Identities = 151/292 (51%), Positives = 184/292 (63%), Gaps = 19/292 (6%)
 Frame = +2

Query: 161 MASTVITSRNESSWGQSLGK---FMGKTTAYAXXXXXXXXXXXXXXXXXXXXXXXQYHAL 331
           MAS V+ SRNESSW QS G    FMGKT  Y+                        +HA 
Sbjct: 1   MASAVLASRNESSWAQSGGAGGGFMGKTP-YSHTHLNPNSNPNPKKKQKQF-----HHAS 54

Query: 332 NG--HDELPAITQTAPDDAYSFNQRTIEANSRTGDGFNHAVGGFVNIKVSNCSRTELKDV 505
           NG  +DELPA+TQTA DDAYSFNQR IE+++   DG N  +GG++   V++ S+TEL D+
Sbjct: 55  NGCHNDELPAVTQTASDDAYSFNQRPIESSANV-DGLN--LGGYMTYNVASYSKTELHDL 111

Query: 506 RRKLELELERVKILNDQIESRKLV---PRPSHGKMKKISGQKRALPVGLSPIETQLENVG 676
           R +L  ELE+++ L D+IES +L    PR SHGK KK+SG KR  P G S    +L N  
Sbjct: 112 RSRLVAELEQIRNLKDRIESGQLSTSNPR-SHGKSKKLSGNKRPTPSGSSKDPKKLPNGV 170

Query: 677 PNGNIDE-----------VETLMKSCRQILMKLMKHKHSWVFNKPVDALALGLHDYHLIV 823
            N N              +E +MK CRQ+L KLMKHK  W+FN PVDA ALGLHDY  I+
Sbjct: 171 DNRNFGNPGGGGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQII 230

Query: 824 KRPMDLGTVKMNFAKNLYSSPVEFASDVRLTFNNAMLYNPKTDEVHRMAAQL 979
           KRPMDLGTVK N + NLY +P EFA+DVRLTFNNA+LYNPKTD+VH  A  L
Sbjct: 231 KRPMDLGTVKSNLSNNLYPTPFEFAADVRLTFNNALLYNPKTDQVHVFAELL 282


>emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
           benthamiana]
          Length = 615

 Score =  250 bits (639), Expect = 3e-64
 Identities = 149/292 (51%), Positives = 184/292 (63%), Gaps = 19/292 (6%)
 Frame = +2

Query: 161 MASTVITSRNESSWGQSLGK---FMGKTTAYAXXXXXXXXXXXXXXXXXXXXXXXQYHAL 331
           MAS V+ SRNESSW QS G    FMGKT  Y+                        +HA 
Sbjct: 1   MASAVLASRNESSWAQSGGAGGGFMGKTP-YSHTHLNPNSNPKPKKKQKQF-----HHAS 54

Query: 332 NG--HDELPAITQTAPDDAYSFNQRTIEANSRTGDGFNHAVGGFVNIKVSNCSRTELKDV 505
           NG  +DE PA+TQTA DDAYSFNQR IE+++   DG N  +GG++   V++ ++TEL ++
Sbjct: 55  NGRQNDESPAVTQTASDDAYSFNQRPIESSTNV-DGLN--LGGYMTYNVASYNKTELHEL 111

Query: 506 RRKLELELERVKILNDQIESRKLV---PRPSHGKMKKISGQKRALPVGLSPIETQLENVG 676
           R +L  ELE+++ L D+IES +L    PR SHGK KK+SG KRA P G S    +L N  
Sbjct: 112 RSRLVAELEQIRSLKDRIESGQLSTSNPR-SHGKSKKLSGNKRATPSGSSKDPKKLPNGV 170

Query: 677 PNGNIDE-----------VETLMKSCRQILMKLMKHKHSWVFNKPVDALALGLHDYHLIV 823
            N N              +E +MK CRQ+L KLMKHK  W+FN PVDA ALGLHDYH I+
Sbjct: 171 DNRNFGNPGGVGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQII 230

Query: 824 KRPMDLGTVKMNFAKNLYSSPVEFASDVRLTFNNAMLYNPKTDEVHRMAAQL 979
           KRPMDLGTVK N +   Y +P EFA+DVRLTFNNA+LYNPKTD+VH  A QL
Sbjct: 231 KRPMDLGTVKSNLSNCFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQL 282


>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
          Length = 617

 Score =  248 bits (633), Expect = 2e-63
 Identities = 147/293 (50%), Positives = 182/293 (62%), Gaps = 20/293 (6%)
 Frame = +2

Query: 161 MASTVITSRNESSWGQSLGK---FMGKTTAYAXXXXXXXXXXXXXXXXXXXXXXXQYHAL 331
           MA  V+ SRNESSW QS G    FMGKT  Y+                        +HA 
Sbjct: 1   MAFAVLASRNESSWAQSGGAGGGFMGKTP-YSHTHLNPNSNPNPKKKQKQF-----HHAS 54

Query: 332 NG--HDELPAITQTAPDDAYSFNQRTIEANSRTGDGFNHAVGGFVNIKVSNCSRTELKDV 505
           NG  +DE PA+TQTA DDAYSFNQR IE+++   DG N  +GG++   V++ ++TEL ++
Sbjct: 55  NGRHNDESPAVTQTASDDAYSFNQRPIESSTNV-DGLN--LGGYMTYNVASYNKTELHEL 111

Query: 506 RRKLELELERVKILNDQIESRKLV---PRPSHGKMKKISGQKRALPVGLSPIETQLENVG 676
           R +L  ELE+++ L D+IES +L    PR SHGK KK+SG KR  P G S    +L N  
Sbjct: 112 RSRLVAELEQIRNLKDRIESGQLSTSNPR-SHGKSKKLSGNKRPTPSGSSKDRKKLLNGV 170

Query: 677 PNGNIDE------------VETLMKSCRQILMKLMKHKHSWVFNKPVDALALGLHDYHLI 820
            N N               +E +MK CRQ+L KLMKHK  W+FN PVDA A+GLHDYH I
Sbjct: 171 DNRNFGNPGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQI 230

Query: 821 VKRPMDLGTVKMNFAKNLYSSPVEFASDVRLTFNNAMLYNPKTDEVHRMAAQL 979
           +KRPMDLGTVK N   N Y +P EFA+DVRLTFNNA+LYNPKTD+VH  A QL
Sbjct: 231 IKRPMDLGTVKSNLINNFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQL 283


>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
           gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
           protein Virp1a [Solanum lycopersicum]
           gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
           protein Virp1b [Solanum lycopersicum]
           gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
           protein Virp1c [Solanum lycopersicum]
           gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
           protein Virp1d [Solanum lycopersicum]
           gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
           gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score =  244 bits (622), Expect = 3e-62
 Identities = 148/292 (50%), Positives = 181/292 (61%), Gaps = 19/292 (6%)
 Frame = +2

Query: 161 MASTVITSRNESSWGQSLGK---FMGKTTAYAXXXXXXXXXXXXXXXXXXXXXXXQYHAL 331
           MAS V+ SRNESSW QS G    FMGKT  Y+                        +H  
Sbjct: 1   MASAVLASRNESSWAQSGGAGGGFMGKTP-YSHTQLNPNHNPNPKKKQKQF-----HHTS 54

Query: 332 NGH--DELPAITQTAPDDAYSFNQRTIEANSRTGDGFNHAVGGFVNIKVSNCSRTELKDV 505
           NG   D+ PA+TQTA DDAYSFNQR IE+ +   DG N   GG++   V + ++ E+ ++
Sbjct: 55  NGRHMDDSPAVTQTASDDAYSFNQRPIESTTNV-DGLNF--GGYLTFNVVSYNKAEVNEL 111

Query: 506 RRKLELELERVKILNDQIESRKLV---PRPSHGKMKKISGQKRALPVGLS------PIET 658
           R +L  E+E+++ L D+IES +L    PR S GK KK SG KR  P G S      P   
Sbjct: 112 RSRLMAEVEQIRNLKDRIESGQLSTTNPR-SQGKSKKQSGNKRPTPSGSSKDLKKLPNGV 170

Query: 659 QLENVGPNGNIDEV-----ETLMKSCRQILMKLMKHKHSWVFNKPVDALALGLHDYHLIV 823
           +  N G  G +D V     E++MK CRQIL KLMKHK+ W+FN PVDA ALGLHDYH I+
Sbjct: 171 ENRNFGNPGGVDGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQII 230

Query: 824 KRPMDLGTVKMNFAKNLYSSPVEFASDVRLTFNNAMLYNPKTDEVHRMAAQL 979
           KRPMDLGTVK N AKN Y SP EFA+DVRLTFNNA+LYNPKTD+V+  A QL
Sbjct: 231 KRPMDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQL 282


>emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
          Length = 616

 Score =  241 bits (616), Expect = 1e-61
 Identities = 145/292 (49%), Positives = 178/292 (60%), Gaps = 19/292 (6%)
 Frame = +2

Query: 161 MASTVITSRNESSWGQSLGK---FMGKTTAYAXXXXXXXXXXXXXXXXXXXXXXXQYHAL 331
           MAS V+ SRNESSW QS G    FMGKT  Y+                        +HA 
Sbjct: 1   MASAVLASRNESSWAQSGGAGGGFMGKTP-YSHTQLNPNSNPNPKKKQKQF-----HHAS 54

Query: 332 NGH--DELPAITQTAPDDAYSFNQRTIEANSRTGDGFNHAVGGFVNIKVSNCSRTELKDV 505
           NG   DE PA+TQTA DDAYSFNQR IE+++   DG N  +GG++    ++ ++TEL ++
Sbjct: 55  NGRLTDESPAVTQTASDDAYSFNQRPIESSTNV-DGLN--LGGYMTYNXASYNKTELHEL 111

Query: 506 RRKLELELERVKILNDQIESRKLV---PRPSHGKMKKISGQKRALPVGLSPIETQLENVG 676
           R +L  ELE+++ L D+IES +L    PR SHGK KK+SG KR  P G S    +L N  
Sbjct: 112 RSRLVAELEQIRNLKDRIESGQLSTSNPR-SHGKSKKLSGNKRPTPSGSSKDPKKLPNGV 170

Query: 677 PNGNIDEV-----------ETLMKSCRQILMKLMKHKHSWVFNKPVDALALGLHDYHLIV 823
            N N               E +MK C Q+L KLMKHK  W+FN PVDA ALGLHDYH I+
Sbjct: 171 DNRNFGNPGGGGVKGIIGKENMMKECTQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQII 230

Query: 824 KRPMDLGTVKMNFAKNLYSSPVEFASDVRLTFNNAMLYNPKTDEVHRMAAQL 979
           KRP DLGT K N + N Y +P EFA+DVRLTFNNA+LYNPKTD+VH  A QL
Sbjct: 231 KRPXDLGTXKSNLSNNFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQL 282