BLASTX nr result

ID: Bupleurum21_contig00007360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007360
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]      94   9e-18
ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|...    73   3e-11
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]                  72   4e-11
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]                  72   4e-11
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]        72   4e-11

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = -1

Query: 311 IVGLEPGELKMAQLNLARSYRRQSRACQES-SNVQRIVHNVIADKVMVEPHKFEGLYITK 135
           ++GL+PGEL  AQ  LA  Y+ Q R   ++ S V     + + ++VMV PH+FEG +  K
Sbjct: 194 LIGLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSFLQEQVMVVPHRFEGFFNAK 253

Query: 134 GLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6
           G  KKN +CT+NLVPG+ LYG++LI V+NED  TEVE+RV +P
Sbjct: 254 G--KKNILCTRNLVPGEALYGEKLIHVQNEDG-TEVEYRVCDP 293


>ref|XP_002513667.1| fibrillarin, putative [Ricinus communis]
           gi|223547575|gb|EEF49070.1| fibrillarin, putative
           [Ricinus communis]
          Length = 247

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/59 (59%), Positives = 49/59 (83%)
 Frame = -1

Query: 182 KVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6
           KV+VEPH+ EG++I KG GK++ + TKNLVPG+ +Y ++ ISV+NED  T+VE+RVWNP
Sbjct: 6   KVVVEPHRHEGVFIGKG-GKEDALVTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 62


>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/60 (56%), Positives = 49/60 (81%)
 Frame = -1

Query: 185 DKVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6
           +KV+VEPH+  G++I KG  K++ +CTKNLVPG+ +Y ++ ISV+NED  T+VE+RVWNP
Sbjct: 74  NKVVVEPHRHGGVFIAKG--KEDALCTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 130


>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/60 (56%), Positives = 49/60 (81%)
 Frame = -1

Query: 185 DKVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6
           +KV+VEPH+  G++I KG  K++ +CTKNLVPG+ +Y ++ ISV+NED  T+VE+RVWNP
Sbjct: 74  NKVVVEPHRHGGVFIAKG--KEDALCTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 130


>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
          Length = 314

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/60 (56%), Positives = 49/60 (81%)
 Frame = -1

Query: 185 DKVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6
           +KV+VEPH+  G++I KG  K++ +CTKNLVPG+ +Y ++ ISV+NED  T+VE+RVWNP
Sbjct: 74  NKVVVEPHRHGGVFIAKG--KEDALCTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 130


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