BLASTX nr result
ID: Bupleurum21_contig00007360
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00007360 (317 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] 94 9e-18 ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|... 73 3e-11 emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana] 72 4e-11 emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana] 72 4e-11 dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum] 72 4e-11 >dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] Length = 475 Score = 94.4 bits (233), Expect = 9e-18 Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 1/103 (0%) Frame = -1 Query: 311 IVGLEPGELKMAQLNLARSYRRQSRACQES-SNVQRIVHNVIADKVMVEPHKFEGLYITK 135 ++GL+PGEL AQ LA Y+ Q R ++ S V + + ++VMV PH+FEG + K Sbjct: 194 LIGLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSFLQEQVMVVPHRFEGFFNAK 253 Query: 134 GLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6 G KKN +CT+NLVPG+ LYG++LI V+NED TEVE+RV +P Sbjct: 254 G--KKNILCTRNLVPGEALYGEKLIHVQNEDG-TEVEYRVCDP 293 >ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|223547575|gb|EEF49070.1| fibrillarin, putative [Ricinus communis] Length = 247 Score = 72.8 bits (177), Expect = 3e-11 Identities = 35/59 (59%), Positives = 49/59 (83%) Frame = -1 Query: 182 KVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6 KV+VEPH+ EG++I KG GK++ + TKNLVPG+ +Y ++ ISV+NED T+VE+RVWNP Sbjct: 6 KVVVEPHRHEGVFIGKG-GKEDALVTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 62 >emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana] Length = 314 Score = 72.4 bits (176), Expect = 4e-11 Identities = 34/60 (56%), Positives = 49/60 (81%) Frame = -1 Query: 185 DKVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6 +KV+VEPH+ G++I KG K++ +CTKNLVPG+ +Y ++ ISV+NED T+VE+RVWNP Sbjct: 74 NKVVVEPHRHGGVFIAKG--KEDALCTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 130 >emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana] Length = 314 Score = 72.4 bits (176), Expect = 4e-11 Identities = 34/60 (56%), Positives = 49/60 (81%) Frame = -1 Query: 185 DKVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6 +KV+VEPH+ G++I KG K++ +CTKNLVPG+ +Y ++ ISV+NED T+VE+RVWNP Sbjct: 74 NKVVVEPHRHGGVFIAKG--KEDALCTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 130 >dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum] Length = 314 Score = 72.4 bits (176), Expect = 4e-11 Identities = 34/60 (56%), Positives = 49/60 (81%) Frame = -1 Query: 185 DKVMVEPHKFEGLYITKGLGKKNFICTKNLVPGKVLYGDQLISVKNEDDRTEVEHRVWNP 6 +KV+VEPH+ G++I KG K++ +CTKNLVPG+ +Y ++ ISV+NED T+VE+RVWNP Sbjct: 74 NKVVVEPHRHGGVFIAKG--KEDALCTKNLVPGEAVYNEKRISVQNEDG-TKVEYRVWNP 130