BLASTX nr result

ID: Bupleurum21_contig00007354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007354
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299105.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-09
ref|XP_002532066.1| importin beta-3, putative [Ricinus communis]...    65   1e-08
ref|XP_002304857.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_002285720.1| PREDICTED: importin-5 [Vitis vinifera]             61   2e-08
ref|XP_004149116.1| PREDICTED: importin-5-like [Cucumis sativus]...    63   6e-08

>ref|XP_002299105.1| predicted protein [Populus trichocarpa] gi|222846363|gb|EEE83910.1|
           predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 32/69 (46%), Positives = 42/69 (60%)
 Frame = +1

Query: 166 NNWLELALFIVHCVYRDD*KHQENGLLIFTQLAHYLGEILVPYVHTLHCTFVWSLGTGVQ 345
           N W EL  F+  CV  D  K QE+  LIF QL+ Y+GE LVPY+  LH  F+  LG+   
Sbjct: 138 NGWPELLPFMFQCVTSDSVKLQESAFLIFAQLSQYIGESLVPYIKELHGVFLQCLGSSTN 197

Query: 346 LNVRIASFN 372
            +V+IA+ N
Sbjct: 198 FDVKIAALN 206


>ref|XP_002532066.1| importin beta-3, putative [Ricinus communis]
           gi|223528270|gb|EEF30321.1| importin beta-3, putative
           [Ricinus communis]
          Length = 1095

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = +1

Query: 166 NNWLELALFIVHCVYRDD*KHQENGLLIFTQLAHYLGEILVPYVHTLHCTFVWSLGTGVQ 345
           N W EL  F+ +CV  D  K QE+  LIF QL+ Y+GE L+P++  LH  F+  LG+   
Sbjct: 150 NGWPELLPFMFNCVSSDSAKLQESAFLIFAQLSQYIGESLIPFIKDLHTVFLQCLGSSPS 209

Query: 346 LNVRIASFN 372
            +V+IA+ N
Sbjct: 210 FDVKIAALN 218


>ref|XP_002304857.1| predicted protein [Populus trichocarpa] gi|222842289|gb|EEE79836.1|
           predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = +1

Query: 166 NNWLELALFIVHCVYRDD*KHQENGLLIFTQLAHYLGEILVPYVHTLHCTFVWSLGTGVQ 345
           N W EL  F+  CV  D  K QE+  LIF QL+ Y+GE L+P++  LH  F+  LG+   
Sbjct: 138 NGWPELLPFMFQCVTSDSFKLQESAFLIFAQLSQYIGESLIPFIKELHGVFLQCLGSSTN 197

Query: 346 LNVRIASFN 372
            +V+IA+ N
Sbjct: 198 FDVKIAALN 206


>ref|XP_002285720.1| PREDICTED: importin-5 [Vitis vinifera]
          Length = 1116

 Score = 60.8 bits (146), Expect(2) = 2e-08
 Identities = 31/69 (44%), Positives = 41/69 (59%)
 Frame = +1

Query: 166 NNWLELALFIVHCVYRDD*KHQENGLLIFTQLAHYLGEILVPYVHTLHCTFVWSLGTGVQ 345
           N W EL  F+  CV  D  K QE   LIF QLA Y+GE LVP++  LH  F+ SL +   
Sbjct: 139 NGWPELLPFMFQCVTSDSAKLQEAAFLIFAQLAQYIGETLVPHIKHLHSVFLQSLTSSSS 198

Query: 346 LNVRIASFN 372
            +V+IA+ +
Sbjct: 199 SDVKIAALS 207



 Score = 23.1 bits (48), Expect(2) = 2e-08
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 405 DDF*ELLLLVIGTLTDGLSLGQE 473
           D F +LL  ++ TLT+ L+ GQE
Sbjct: 223 DRFQDLLPAMMRTLTEALNCGQE 245


>ref|XP_004149116.1| PREDICTED: importin-5-like [Cucumis sativus]
           gi|449510441|ref|XP_004163665.1| PREDICTED:
           importin-5-like [Cucumis sativus]
          Length = 1114

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 49/124 (39%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
 Frame = +1

Query: 172 WLELALFIVHCVYRDD*KHQENGLLIFTQLAHYLGEILVPYVHTLHCTFVWSLGTGVQLN 351
           W EL  FI  CV  D  K QE+ LLIF QLA Y+GE LVP++ TLH  F   L +    +
Sbjct: 140 WNELMPFIFQCVTSDSSKLQESALLIFAQLAQYIGETLVPHLDTLHSVFSQCLASSKTGD 199

Query: 352 VRI----ASFNISYFGSGKGDGMIFEN---CCF**LVH*LMD*VWGKRH*ILMMLIEFAG 510
           VRI    A+ N     S   D   F+N        L   L           L +LIE AG
Sbjct: 200 VRIAALGAAINFIQCLSSASDRDRFQNLLPLMMQTLTEALNSGQEATAKDALELLIELAG 259

Query: 511 SEPR 522
           +EPR
Sbjct: 260 TEPR 263


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