BLASTX nr result

ID: Bupleurum21_contig00007333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007333
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270134.1| PREDICTED: uncharacterized protein LOC100255...   211   2e-52
ref|XP_002534303.1| hypothetical protein RCOM_0116230 [Ricinus c...   186   8e-45
ref|XP_002309180.1| predicted protein [Populus trichocarpa] gi|2...   183   4e-44
ref|XP_002323063.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43
gb|AFK39924.1| unknown [Medicago truncatula]                          174   2e-41

>ref|XP_002270134.1| PREDICTED: uncharacterized protein LOC100255128 [Vitis vinifera]
          Length = 396

 Score =  211 bits (536), Expect = 2e-52
 Identities = 134/300 (44%), Positives = 180/300 (60%), Gaps = 36/300 (12%)
 Frame = -2

Query: 870 KKRASVRSTTSPRHLKTTSVSTDCSCRSSLEEQNQKYNPT-----DTCSSEENDCAVFPE 706
           K+R   R+  S   L T+SVS  CSCR++LE    K + T         S  +  ++ PE
Sbjct: 98  KQRVRRRALRSSPRLVTSSVSAGCSCRATLESVWTKSDSTPDFWDSPLDSSPDGVSLLPE 157

Query: 705 LGSENGDKDKPFDKMVS---SCHCRVQS---------DIPMAMAKGSKDETFDSISHFEL 562
           LGS+     + FD MVS   SC CRV S         +      K  K + F++IS  +L
Sbjct: 158 LGSDRIQSAESFDGMVSWASSCSCRVDSTANDFVIDVEEKSFSRKFDKLDGFETISELDL 217

Query: 561 RPIITKINKSPKSDEQVSKIRRLPAQTDERISNSSSK-KQRNVNSVKKLSLVN------- 406
            PIITK     K +E V+ I++       ++  SS+K ++RN +    + +V        
Sbjct: 218 PPIITK---PAKFNEMVNDIKKKEMTEPVKVRRSSAKFEERNAHGSLSVKIVKEESIGMK 274

Query: 405 ---------YNNNSPGVKLRTNSPRIASKRYLQVHHRKSVSS--GGVARRGLAESFAVVK 259
                    ++ NSPGV+LR NSPRIAS++ +Q H RKSVSS     +RR L++SFA+VK
Sbjct: 275 KQKPSPVRRFSGNSPGVRLRNNSPRIASRK-IQSHGRKSVSSTSSSSSRRSLSDSFAIVK 333

Query: 258 TSQDPHRDFKDSMIEMIMENNIRASKDLEDLLACYLSLNSDKYHDLIIKVFKQIWFEITD 79
           +S DP RDF+DSM+EMI+ENNIRASKDLE+LLACYLSLNSD+YHD+IIKVFKQIWF+I D
Sbjct: 334 SSFDPQRDFRDSMMEMIVENNIRASKDLEELLACYLSLNSDEYHDIIIKVFKQIWFDIPD 393


>ref|XP_002534303.1| hypothetical protein RCOM_0116230 [Ricinus communis]
            gi|223525536|gb|EEF28078.1| hypothetical protein
            RCOM_0116230 [Ricinus communis]
          Length = 434

 Score =  186 bits (471), Expect = 8e-45
 Identities = 135/312 (43%), Positives = 185/312 (59%), Gaps = 42/312 (13%)
 Frame = -2

Query: 876  IKKKRASVRSTTSPRHLKTTSVSTDCSCRSSL------EEQNQKYNPTDTCSSEEN---- 727
            + K+RA+VR + SP+ L T+SVS DCSCR++        +    Y+ + + SS +     
Sbjct: 126  LAKRRAAVRYS-SPK-LVTSSVSADCSCRATAPLWTKPSDSPPDYSASSSDSSRDESSDL 183

Query: 726  --DCAVFPELGSENGDKDKPFDKMVS---SCHCRV-----QSDIPMAMAKGSKDETFDS- 580
              D +  PE  S+     + FDK +    SC C+V       DI + + K S    FD  
Sbjct: 184  CEDDSFPPEFRSDGVLATESFDKKMEWPRSCGCKVVFDGIDDDIIIDVDKKSLGTKFDKL 243

Query: 579  -ISHFELRPIITKINKSPKSD------EQVSKIRRLP-AQTDERISNSSSK-----KQRN 439
             IS  +L PIITK +K    D      ++ SK R    A+  E+ ++ S       KQ  
Sbjct: 244  DISDLDLPPIITKPDKFDDHDNNKDTKKKTSKYRNTTSAKYQEKNAHDSLLSVKVVKQET 303

Query: 438  VNSVKK-----LSLVNYNNNSPGVKLRTNSPRIASKRYLQVHHRKSVSSGGVA---RRGL 283
            V ++K+      S+  ++ NSPG++LR NSPRIA  R +Q   RKSVSS   +   RR L
Sbjct: 304  VVTMKEHKSSSSSIKRHSLNSPGLRLRVNSPRIAVSRRVQAG-RKSVSSSNSSSSSRRSL 362

Query: 282  AESFAVVKTSQDPHRDFKDSMIEMIMENNIRASKDLEDLLACYLSLNSDKYHDLIIKVFK 103
            ++S A+VK+S DP +DF++SM+EMI+ENNIRASKDLEDLLACYLSLNSD+YHDLIIKVFK
Sbjct: 363  SDSLAIVKSSCDPQKDFRESMLEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFK 422

Query: 102  QIWFEITDTRFK 67
            QIWF++T T  K
Sbjct: 423  QIWFDLTGTPSK 434


>ref|XP_002309180.1| predicted protein [Populus trichocarpa] gi|222855156|gb|EEE92703.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  183 bits (465), Expect = 4e-44
 Identities = 126/310 (40%), Positives = 185/310 (59%), Gaps = 41/310 (13%)
 Frame = -2

Query: 873  KKKRASVRSTTSPRHLKTTSVSTDCSCRSSLEEQNQKYNPTDTCSS-------EENDCAV 715
            + +R ++++  SP+H     VS  C+CR++L  ++   +P D  +S       +E D + 
Sbjct: 105  RNRRRTIKA--SPKH-----VSAGCNCRATLWTKSD--SPPDYSASLYDGSLDQETDFSD 155

Query: 714  F--PELGSENGDKDKPFDKMVS---SCHCRVQS----DIPMAMAKGS------KDETFDS 580
               PE  S++      FDKM+S   SC C++ S     I +++ K S        + F S
Sbjct: 156  SFPPEFKSDSALATVSFDKMLSWSSSCDCKLDSIDNDGIVISVDKKSTARNLDNPKVFHS 215

Query: 579  ISHFELRPIITKINK--------SPKSDEQVSKIRRLPAQTDERISNSS------SKKQR 442
            IS  +L PI+TK  K          K  ++ +K RR PA+ +E  +++S       ++  
Sbjct: 216  ISDLDLPPIVTKPAKFDDQLEDTKKKETQEPTKYRRSPAKYEETNAHASLSVKVVKEESI 275

Query: 441  NVNSVKKLSLVNYNNNSPGVKLRTNSPRIASKRYLQVHH-RKSVSS----GGVARRGLAE 277
             V   K  S+   +  SPGV+LR NSPRI++K+    ++ RKSVSS       +RR L++
Sbjct: 276  AVKEYKTSSVRRNSVTSPGVRLRVNSPRISNKKIQAYNNGRKSVSSTTSSSSRSRRSLSD 335

Query: 276  SFAVVKTSQDPHRDFKDSMIEMIMENNIRASKDLEDLLACYLSLNSDKYHDLIIKVFKQI 97
            S AVVK+S DP +DF++SM+EMI+ENNI+ASKDLEDLLACYLSLNSD+YHDLIIKVFKQI
Sbjct: 336  SLAVVKSSFDPQKDFRESMVEMIVENNIKASKDLEDLLACYLSLNSDEYHDLIIKVFKQI 395

Query: 96   WFEITDTRFK 67
            WF++TD + K
Sbjct: 396  WFDLTDIKLK 405


>ref|XP_002323063.1| predicted protein [Populus trichocarpa] gi|222867693|gb|EEF04824.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  179 bits (455), Expect = 6e-43
 Identities = 135/316 (42%), Positives = 192/316 (60%), Gaps = 48/316 (15%)
 Frame = -2

Query: 870  KKRASVRS--TTSPRHLKTTSVSTDCSCRSSL-----EEQNQKYNPTDTCSSEENDCAVF 712
            K+RA  R+  ++SP+ L T+SVS  C+CR++L        +   + +D+   +E D +  
Sbjct: 86   KQRARKRTIKSSSPK-LATSSVSAVCNCRATLWTKPNSPPDYSASLSDSSLDQETDFSDS 144

Query: 711  --PELGSENGDKDKPFDKMVS----SCHCRVQS----DIPMAM-----AKGSKD-ETFDS 580
              PE  S+       FDKM+S    +C C++ S    DI + M     A+ S D + F  
Sbjct: 145  FPPEFRSDCVLATDSFDKMLSWSSSNCDCKLDSNNYDDIVINMDEKYIARRSDDVDVFHK 204

Query: 579  ISHFELRPIITKINKSPKSDEQVS-----------KIRRLPAQTDERISNSSSK----KQ 445
            IS  +L PIITK    PK D+QV            K RR  A+ +E  +N+S      K+
Sbjct: 205  ISDLDLPPIITK---PPKFDDQVEDFKKKDTLEPVKYRRSSAKYEETNANASLSVKVVKE 261

Query: 444  RNVNSVKKL---SLVNYNN-NSPGVKLRTNSPRIASKRYLQVHH--RKSVSSG----GVA 295
             ++ ++K+    + V  N+  SPGV+LR NSPRI S R +Q ++  RKSVSS       +
Sbjct: 262  GSITAMKEHKTNTTVRRNSVTSPGVRLRVNSPRI-SNRKIQAYNNGRKSVSSTTSSLSRS 320

Query: 294  RRGLAESFAVVKTSQDPHRDFKDSMIEMIMENNIRASKDLEDLLACYLSLNSDKYHDLII 115
            RR L++S AVVK+S DP +DF++SM+EMI+ENNI+ASKDLEDLLACYLSLNSD+YHDLII
Sbjct: 321  RRSLSDSLAVVKSSFDPQKDFRESMMEMIVENNIKASKDLEDLLACYLSLNSDEYHDLII 380

Query: 114  KVFKQIWFEITDTRFK 67
            KVFKQIWF+++D + +
Sbjct: 381  KVFKQIWFDLSDIKLQ 396


>gb|AFK39924.1| unknown [Medicago truncatula]
          Length = 382

 Score =  174 bits (442), Expect = 2e-41
 Identities = 131/306 (42%), Positives = 177/306 (57%), Gaps = 40/306 (13%)
 Frame = -2

Query: 873 KKKRASV-----RSTTSPRHLKTTSVSTDCSCRSSLEE---------QNQKYNPTDTCSS 736
           +KKR +       S++SP+++ T+SVS  CSCR++LE          +N   +P D+ + 
Sbjct: 97  RKKRTTTLKSKNSSSSSPKNV-TSSVSAGCSCRTTLESVWTKSDSPHENFSSSPLDSLTE 155

Query: 735 EENDCAVFPELGSENG--DKDKPFDKMVS----SCHCRVQS------DIPMAMAKGSK-- 598
            E+     PE  ++      +  FD+MVS    SC C   S      DI + + K S   
Sbjct: 156 SESPD---PEFRTDRVLIPTEPSFDEMVSLTTSSCACNKISNNNNNIDIVIDVDKNSLAR 212

Query: 597 --------DETFDSISHFELRPIITKINKSPKSDEQVSKIRRLPAQTDERISNSSSKKQR 442
                   D ++DS S  EL PIITK   + K++ +  K   L      +I N    K++
Sbjct: 213 KDDKLEGYDYSYDSFSKLELPPIITK--PTMKNEHKPIKEESLKI----KIINQEQHKKK 266

Query: 441 NVNSVKKLSLVNYNNNSPGVKLRTNSPRIASKRYLQVHH-RKSVSSGGVA---RRGLAES 274
           N    KK    N + NSPGVKLR  SPRI     +Q HH RKSVSS   +   RR  + S
Sbjct: 267 NKK--KK----NGSVNSPGVKLRIKSPRI-----VQFHHVRKSVSSTVTSSGYRRSFSGS 315

Query: 273 FAVVKTSQDPHRDFKDSMIEMIMENNIRASKDLEDLLACYLSLNSDKYHDLIIKVFKQIW 94
            A+VK+S +P +DF++SM+EMI+ENNIRASKDLEDLLACYLSLNSD+YHDLIIKVFKQIW
Sbjct: 316 LAIVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIW 375

Query: 93  FEITDT 76
           F++T+T
Sbjct: 376 FDLTET 381


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