BLASTX nr result

ID: Bupleurum21_contig00007282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007282
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514028.1| conserved hypothetical protein [Ricinus comm...   105   4e-21
emb|CBI19252.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    97   1e-18
emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]    97   1e-18
gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabido...    93   2e-17

>ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
           gi|223547114|gb|EEF48611.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1060

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/107 (49%), Positives = 64/107 (59%)
 Frame = +1

Query: 1   VAGLVFTVIWIVLRRKWRFAAARREEIKRLLVLXXXXXXXXXXXXTVQYGTAAVNVEYVS 180
           V  L+F VI +++RRKWR + AR EEIKRLLVL            TV YG   V+     
Sbjct: 15  VLSLLFPVIGLIIRRKWRLSIARNEEIKRLLVLASEETARAELEATVSYGVVPVS----- 69

Query: 181 QHHQAQQPLLNQCTVCFSQTSKLCSQCKAVRYCSGKCQIIHWRQGHK 321
                 +    QC VC+  T+  C++CKAVRYCSGKCQIIHWRQGHK
Sbjct: 70  ------RNSYYQCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHK 110


>emb|CBI19252.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/104 (50%), Positives = 63/104 (60%)
 Frame = +1

Query: 10  LVFTVIWIVLRRKWRFAAARREEIKRLLVLXXXXXXXXXXXXTVQYGTAAVNVEYVSQHH 189
           L F VI +V+R KWR A AR+EEIKRLL+L              +  TAAV+V       
Sbjct: 17  LFFPVIGLVIRHKWRVAVARKEEIKRLLILASEEAAR------AELETAAVSVS------ 64

Query: 190 QAQQPLLNQCTVCFSQTSKLCSQCKAVRYCSGKCQIIHWRQGHK 321
               P   QC VC+  T+  C++CKAVRYCSGKCQIIHWRQGHK
Sbjct: 65  ----PQF-QCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHK 103


>ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
           vinifera]
          Length = 1213

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/104 (50%), Positives = 63/104 (60%)
 Frame = +1

Query: 10  LVFTVIWIVLRRKWRFAAARREEIKRLLVLXXXXXXXXXXXXTVQYGTAAVNVEYVSQHH 189
           L F VI +V+R KWR A AR+EEIKRLL+L              +  TAAV+V       
Sbjct: 17  LFFPVIGLVIRHKWRVAVARKEEIKRLLILASEEAAR------AELETAAVSVS------ 64

Query: 190 QAQQPLLNQCTVCFSQTSKLCSQCKAVRYCSGKCQIIHWRQGHK 321
               P   QC VC+  T+  C++CKAVRYCSGKCQIIHWRQGHK
Sbjct: 65  ----PQF-QCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHK 103


>emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
          Length = 1225

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/104 (50%), Positives = 63/104 (60%)
 Frame = +1

Query: 10  LVFTVIWIVLRRKWRFAAARREEIKRLLVLXXXXXXXXXXXXTVQYGTAAVNVEYVSQHH 189
           L F VI +V+R KWR A AR+EEIKRLL+L              +  TAAV+V       
Sbjct: 17  LFFPVIGLVIRHKWRVAVARKEEIKRLLILASEEAAR------AELETAAVSVS------ 64

Query: 190 QAQQPLLNQCTVCFSQTSKLCSQCKAVRYCSGKCQIIHWRQGHK 321
               P   QC VC+  T+  C++CKAVRYCSGKCQIIHWRQGHK
Sbjct: 65  ----PQF-QCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHK 103


>gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabidopsis thaliana]
          Length = 1008

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/107 (43%), Positives = 61/107 (57%)
 Frame = +1

Query: 1   VAGLVFTVIWIVLRRKWRFAAARREEIKRLLVLXXXXXXXXXXXXTVQYGTAAVNVEYVS 180
           V  LV  +I + +R KWR AA RREEI+RLL+             +V++ + AV+  +  
Sbjct: 15  VVSLVLPLIGLFVRHKWRVAAQRREEIRRLLIHASEEAARAELEASVEFSSVAVSNVF-- 72

Query: 181 QHHQAQQPLLNQCTVCFSQTSKLCSQCKAVRYCSGKCQIIHWRQGHK 321
                       C VC+   +  CS+CKAVRYCSGKCQIIHWRQGHK
Sbjct: 73  -----------HCPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHK 108


Top