BLASTX nr result

ID: Bupleurum21_contig00007272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007272
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32586.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_003631651.1| PREDICTED: uncharacterized protein At1g01500...   372   e-100
ref|XP_002313048.1| predicted protein [Populus trichocarpa] gi|2...   365   9e-99
emb|CAN67578.1| hypothetical protein VITISV_015331 [Vitis vinifera]   361   2e-98
ref|XP_002509484.1| 2-hydroxyacid dehydrogenase, putative [Ricin...   343   4e-92

>emb|CBI32586.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  377 bits (968), Expect = e-102
 Identities = 193/304 (63%), Positives = 222/304 (73%), Gaps = 3/304 (0%)
 Frame = +2

Query: 20  MENSHMKWNGNGVVENGHSIKRHTSYQPSVKVSLSWLDIRVFYVRVSKCDIDDSTPEYLT 199
           ME S+   NGNG  +NGH   R++ YQP +KVSLSWLDIRVFYVRVSKC+IDDSTPEYLT
Sbjct: 1   MEKSYEPANGNGFTDNGHRTMRYSPYQPCIKVSLSWLDIRVFYVRVSKCEIDDSTPEYLT 60

Query: 200 LNHLPLNHETLLEVNGVRTSIYSDGASTILRRDRFDKKSEEVTFVSTDSLRMTGSVKFEV 379
           LNH+PLN +TLLEVNGVR+SIYSDG ST+LRRDR DKKSEE TFVSTDS+RMTGSVKFEV
Sbjct: 61  LNHIPLNRDTLLEVNGVRSSIYSDGVSTLLRRDRLDKKSEEATFVSTDSVRMTGSVKFEV 120

Query: 380 FDKDVLVLSGALESSHGSGSIGEPENHCRKWSMDCESDVPSGSGLFKTKQY---SSLELP 550
           FDKDVLVL G LE S+ +G  G+ +N  ++WSM CE D+  G+   K KQY        P
Sbjct: 121 FDKDVLVLYGVLEMSNSNGCTGKSKNIGQRWSMTCELDIVPGTSFLKGKQYMGGPESASP 180

Query: 551 EIEVYVAGCFSGVPIILTKTLLLGSRKKHTRKGMLKSIPEYEATESQKDVPDGLALQVGD 730
            IEVY+AGCFS  PIILTKTL L  RKK  RKGML SIPEY+ATE QKD   GL+LQ+ +
Sbjct: 181 AIEVYIAGCFSATPIILTKTLQLTLRKKQIRKGMLDSIPEYDATECQKDETAGLSLQISE 240

Query: 731 YSNHKPENEEYNHHLYHPGMEYLEGEDGELSWFTAGVRXXXXXXXXXXXXXXXXXXXXXK 910
           + N+KPENE+YN    + G EYLEGEDGELSWFTAGVR                     +
Sbjct: 241 HPNYKPENEDYNS--LYSGTEYLEGEDGELSWFTAGVRVGVGIGLSICLGIGIGVGLLVR 298

Query: 911 TYQG 922
           TYQG
Sbjct: 299 TYQG 302


>ref|XP_003631651.1| PREDICTED: uncharacterized protein At1g01500-like [Vitis vinifera]
          Length = 315

 Score =  372 bits (954), Expect = e-100
 Identities = 193/307 (62%), Positives = 222/307 (72%), Gaps = 6/307 (1%)
 Frame = +2

Query: 20  MENSHMKWNGNGVVENGHSIKRHTSYQPSVKVSLSWLDIRVFYVRVSKCDIDDSTPEYLT 199
           ME S+   NGNG  +NGH   R++ YQP +KVSLSWLDIRVFYVRVSKC+IDDSTPEYLT
Sbjct: 1   MEKSYEPANGNGFTDNGHRTMRYSPYQPCIKVSLSWLDIRVFYVRVSKCEIDDSTPEYLT 60

Query: 200 LNHLPLNHETLLEVNGVRTSIYSDGASTILRRDRFDKKSEEVTFVSTDSLRMTGSVKFEV 379
           LNH+PLN +TLLEVNGVR+SIYSDG ST+LRRDR DKKSEE TFVSTDS+RMTGSVKFEV
Sbjct: 61  LNHIPLNRDTLLEVNGVRSSIYSDGVSTLLRRDRLDKKSEEATFVSTDSVRMTGSVKFEV 120

Query: 380 FDKDVLVLSGALESSHGSGSIGEPENHCRKWSMDCESDVPSGSGLFKTKQY---SSLELP 550
           FDKDVLVL G LE S+ +G  G+ +N  ++WSM CE D+  G+   K KQY        P
Sbjct: 121 FDKDVLVLYGVLEMSNSNGCTGKSKNIGQRWSMTCELDIVPGTSFLKGKQYMGGPESASP 180

Query: 551 EIEVYVAGCFSGVPIILTKTLLLGSRKKHTRKGMLKSIPEYEATESQKDVPDGLA---LQ 721
            IEVY+AGCFS  PIILTKTL L  RKK  RKGML SIPEY+ATE QKD   GL+   LQ
Sbjct: 181 AIEVYIAGCFSATPIILTKTLQLTLRKKQIRKGMLDSIPEYDATECQKDETAGLSLQMLQ 240

Query: 722 VGDYSNHKPENEEYNHHLYHPGMEYLEGEDGELSWFTAGVRXXXXXXXXXXXXXXXXXXX 901
           + ++ N+KPENE+YN    + G EYLEGEDGELSWFTAGVR                   
Sbjct: 241 ISEHPNYKPENEDYNS--LYSGTEYLEGEDGELSWFTAGVRVGVGIGLSICLGIGIGVGL 298

Query: 902 XXKTYQG 922
             +TYQG
Sbjct: 299 LVRTYQG 305


>ref|XP_002313048.1| predicted protein [Populus trichocarpa] gi|222849456|gb|EEE87003.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  365 bits (938), Expect = 9e-99
 Identities = 188/303 (62%), Positives = 223/303 (73%), Gaps = 2/303 (0%)
 Frame = +2

Query: 20  MENSHMKWNGNGVVENGHSIKRHTSYQPSVKVSLSWLDIRVFYVRVSKCDIDDSTPEYLT 199
           MENS+   NGNG+ ENGH++ R T +QP    SL WLD+RVFYVR+S+C+IDDSTPE+L+
Sbjct: 3   MENSYETSNGNGLRENGHAVVRQTPHQPR---SLPWLDLRVFYVRISRCEIDDSTPEHLS 59

Query: 200 LNHLPLNHETLLEVNGVRTSIYSDGASTILRRDRFDKKSEEVTFVSTDSLRMTGSVKFEV 379
           +N++PL  +TLLEVNGVRTSI SDGAST LRRDR DKKSEE TFVSTDS+RMTGSV+FEV
Sbjct: 60  VNYIPLYPDTLLEVNGVRTSINSDGASTTLRRDRLDKKSEEATFVSTDSIRMTGSVRFEV 119

Query: 380 FDKDVLVLSGALESSHGSGSIGEPENHCRKWSMDCESDVPSGSGLFKTKQY--SSLELPE 553
           FDKDVLVLSG LE    +G +GE  NH ++WSM+CESD+  G+G  K KQ+     E+P 
Sbjct: 120 FDKDVLVLSGVLELCCSNGFVGESRNHDQRWSMNCESDITLGNGFLKDKQFMGPDSEMPT 179

Query: 554 IEVYVAGCFSGVPIILTKTLLLGSRKKHTRKGMLKSIPEYEATESQKDVPDGLALQVGDY 733
           IEVYV G FSG PIILTKTL LG RKK  RKGML SIPEYEATESQ   P    LQ+ +Y
Sbjct: 180 IEVYVTGSFSGTPIILTKTLQLGFRKKQMRKGMLDSIPEYEATESQDKAPSRFPLQLSEY 239

Query: 734 SNHKPENEEYNHHLYHPGMEYLEGEDGELSWFTAGVRXXXXXXXXXXXXXXXXXXXXXKT 913
           S+HKPENE+Y  HL+ PG EY++GEDGE+SWF AGVR                     +T
Sbjct: 240 SDHKPENEDY--HLF-PGTEYMDGEDGEMSWFNAGVRVGVGIGLSVCVGIGIGVGLLVRT 296

Query: 914 YQG 922
           YQG
Sbjct: 297 YQG 299


>emb|CAN67578.1| hypothetical protein VITISV_015331 [Vitis vinifera]
          Length = 388

 Score =  361 bits (926), Expect(2) = 2e-98
 Identities = 185/280 (66%), Positives = 214/280 (76%), Gaps = 6/280 (2%)
 Frame = +2

Query: 20  MENSHMKWNGNGVVENGHSIKRHTSYQPSVKVSLSWLDIRVFYVRVSKCDIDDSTPEYLT 199
           ME S+   NGNG  +NGH   R++ YQP +KVSLSWLDIRVFYVRVSKC+IDDSTPEYLT
Sbjct: 1   MEKSYEPANGNGFXDNGHRTMRYSPYQPCIKVSLSWLDIRVFYVRVSKCEIDDSTPEYLT 60

Query: 200 LNHLPLNHETLLEVNGVRTSIYSDGASTILRRDRFDKKSEEVTFVSTDSLRMTGSVKFEV 379
           LNH+PLN +TLLEVN VR+SIYSDG ST+LRRDR DKKSEE TFVSTDS+RMTGSVKFEV
Sbjct: 61  LNHIPLNRDTLLEVNXVRSSIYSDGVSTLLRRDRLDKKSEEATFVSTDSVRMTGSVKFEV 120

Query: 380 FDKDVLVLSGALESSHGSGSIGEPENHCRKWSMDCESDVPSGSGLFKTKQY---SSLELP 550
           FDKDVLVL G LE S+ +G  G+ +N  ++WSM CE D+  G+   K KQY        P
Sbjct: 121 FDKDVLVLYGVLEMSNSNGXTGKSKNIGQRWSMTCELDIVPGTSFLKGKQYMGGPESASP 180

Query: 551 EIEVYVAGCFSGVPIILTKTLLLGSRKKHTRKGMLKSIPEYEATESQKDVPDGLA---LQ 721
            IEVY+AGCFS  PIILTKTL L  RKK  RKGML SIPEY+ATE QKD   GL+   LQ
Sbjct: 181 AIEVYIAGCFSATPIILTKTLQLTLRKKQIRKGMLDSIPEYDATECQKDETAGLSLQMLQ 240

Query: 722 VGDYSNHKPENEEYNHHLYHPGMEYLEGEDGELSWFTAGV 841
           + ++ N+K ENE+YN    + G EYLEGEDGELSWFTAG+
Sbjct: 241 ISEHPNYKXENEDYNS--LYSGTEYLEGEDGELSWFTAGL 278



 Score = 25.8 bits (55), Expect(2) = 2e-98
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 871 VSWNRNRGWFVGKNLPRNYSELQK 942
           +S NR+R    G++LPR+  +LQK
Sbjct: 279 LSRNRHRSGAAGQDLPRHXQQLQK 302


>ref|XP_002509484.1| 2-hydroxyacid dehydrogenase, putative [Ricinus communis]
           gi|223549383|gb|EEF50871.1| 2-hydroxyacid dehydrogenase,
           putative [Ricinus communis]
          Length = 310

 Score =  343 bits (881), Expect = 4e-92
 Identities = 178/303 (58%), Positives = 215/303 (70%), Gaps = 2/303 (0%)
 Frame = +2

Query: 20  MENSHMKWNGNGVVENGHSIKRHTSYQPSVKVSLSWLDIRVFYVRVSKCDIDDSTPEYLT 199
           MENS+   NGNG+++N H+  R +S QPS+ V L WLD+RVFYVRVSKC+IDD+TPE+LT
Sbjct: 1   MENSYETSNGNGLLDNDHTNMRQSS-QPSINVPLPWLDLRVFYVRVSKCEIDDATPEHLT 59

Query: 200 LNHLPLNHETLLEVNGVRTSIYSDGASTILRRDRFDKKSEEVTFVSTDSLRMTGSVKFEV 379
           +NH+PL+ +TLLEVNG+RT + SDG S +LRRDR DKKSEE TFVSTDS+R+TGSVKFEV
Sbjct: 60  VNHIPLHPDTLLEVNGIRTPVDSDGPSILLRRDRLDKKSEEATFVSTDSIRITGSVKFEV 119

Query: 380 FDKDVLVLSGALESSHGSGSIGEPENHCRKWSMDCESDVPSGSGLFKTKQYSSLELPE-- 553
           FDK++L+LSG LE  + +G IGEP  H  KWS++C+SD   G+   K KQ+  L+ P   
Sbjct: 120 FDKNILLLSGVLELCYSNGVIGEPRGHSYKWSINCKSDATVGTSFLKAKQHMGLDSPSPT 179

Query: 554 IEVYVAGCFSGVPIILTKTLLLGSRKKHTRKGMLKSIPEYEATESQKDVPDGLALQVGDY 733
           IEVYVAG FSG PIILT TL L   KK  RKGML SIPEYEATE+    P  + LQ  DY
Sbjct: 180 IEVYVAGSFSGTPIILTNTLQLSLHKKQMRKGMLDSIPEYEATENPDYAPFRIPLQFQDY 239

Query: 734 SNHKPENEEYNHHLYHPGMEYLEGEDGELSWFTAGVRXXXXXXXXXXXXXXXXXXXXXKT 913
           SN KPENE Y++   + G EYLEGEDGELSWF AGVR                     +T
Sbjct: 240 SNLKPENEGYSY--LYSGREYLEGEDGELSWFNAGVRVGVGIGLSICIGIGIGVGLLVQT 297

Query: 914 YQG 922
           YQG
Sbjct: 298 YQG 300


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